Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yebT [H]

Identifier: 82543758

GI number: 82543758

Start: 1244160

End: 1246799

Strand: Direct

Name: yebT [H]

Synonym: SBO_1249

Alternate gene names: 82543758

Gene position: 1244160-1246799 (Clockwise)

Preceding gene: 82543757

Following gene: 82543759

Centisome position: 27.53

GC content: 53.18

Gene sequence:

>2640_bases
ATGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCT
GCTGCCTTTCATCGCGCTAATGATTGCCGGTTGGCTGATTTGGGACAGTTATCAGGACCGAAGTAATACCGTCACCATCG
ACTTTATGTCGGCGGATGGTATTGTCCCGGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGAT
ATCAGCCTCAGCGACGATCTTCGTAAGATTGAAGTCAAGGTCAGCATCAAGTCCGATATGAAAGATGCGCTGCGCGAAGA
GACTCAATTCTGGCTGGTGACGCCAAAAGCATCGTTGGCAGGTGTCTCCGGGCTGGACGCCCTCGTCGGTGGGAACTATA
TCGGCATGATGCCGGGTACAGGTAAAGAGCAGGATCACTTTGTCGCACTCGATACCCAACCGAAATATCGGCTGAACAAT
GGCGATCTGATGATCCACCTGCAAGCCCCCGATCTCGGTTCGCTGAACAGCGGTTCATTGGTCTATTTCCGCAAGATCCC
GGTGGGAAAAGTCTACGACTATGCCATCAATCCCAACAAACAAGGCGTGGTGATTGATGTCCTGATCGAGCGGCGTTTTA
CCGATCTGGTGAAAAAAGGTAGCCGTTTCTGGAACGTTTCCGGCGTTGATGCCAATGTCAGTATCAGTGGCGCGAAGGTG
AAACTGGAAAGCCTGGCGGCACTGGTTAACGGTGCGATTGCCTTCGATTCACCAGAAGAGTCGAAACCTGCCGAGGCGGA
AGATACCTTTGGTCTGTATGAAGACCTCGCCCATAGCCAGCGTGGCGTAATAATCAAACTGGAACTGCCGAGTGGGGCCG
GATTAACCGCCGACTCGACGCCATTAATGTATCAGGGACTGGAAGTCGGACAGCTAACTAAACTGGATTTAAATCCTGGT
GGTAAAGTCACTGGGGAAATGACAGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGTAA
TCCGAAATTATCCCTTAGCGATGCCAATCTCAGCGCCCTGCTGACTGGCAAAACCTTCGAGTTGGTACCCGGCGATGGCG
AGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACC
GCGCCGGAAAGTTACGGTATTGATACGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATTGATCGTAA
ACTCACCAGCAAAGGCGTTACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTCG
TCGTCAACAGCCGTGTCGACGTGAAGGTGGGGCTGGATGGCGTTGAGTTTCTTGGTGCCAGCGCCTCAGAATGGATTCAC
GGCGGGATACGTATTCGGCCAGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATCTGGAAAAAGCGCT
GGAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGG
TAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGTTTGATATCGATCTGCAT
ATTAAGCCGGAGTATCGCAACCTTCTGACCAGCAATAGCGTGTTCTGGGCAGAAGGCGGGGCGAAAGTTCAGCTGAATGG
TAGTGGCCTGACCGTACAGGCATCCCCGCTCTCCAGAGCATTAAAGGGAGCCATTAGCTTCGATAACCTCAGCGGTGCCA
GCGCCAGTCAGCGTAAAGGCGACAAACGAATTCTGTATGCTTCCGAAACAGCGGCCCGTGCGGTTAGTGGGCAGATTACG
CTTCACGCTTTCGATGCCGGAAAACTGGCGGTCGGGATGCCAATTCGCTATCTCGGTATTGATATCGGGCAAATCCAGAC
GCTGGATCTGATTACCGCGCGCAATGAAGTACAGGCAAAGGCGGTGCTCTATCCGGAGTATGTCCAGACCTTCGCCCGCG
GCGGTACGCGCTTCTCGGTGGTCACACCGCAAATTTCAGCCACGGGCGTTGAGCATCTAGATACTATCCTCCAGCCGTAT
ATCAATGTCGAACCAGGTCGGGGTAATCCTCGCCGTGACTTTGAGTTGCAAGAAGCTACTATTACTGATTCGCGTTACCT
GGATGGCTTAAGCATTATTGTCGAAGCACCGGAAGCCGGTTCGTTAGGTATTGGTACGCCTGTGCTGTTCCGTGGTCTGG
AAGTAGGTACGGTTACCGGAATGACGCTGGGGACATTGTCAGATCGCGTGATGATTGCGATGCGCATCAGTAAACGCTAT
CAACACCTGGTGCGTAACAATTCCGTCTTCTGGTTGGCATCGGGTTACAGTCTGGACTTTGGTCTGACGGGCGGCGTAGT
GAAAACCGGCACCTTTAACCAGTTTATCCGTGGCGGCATCGCCTTCGCCACGCCTCCGGGTACGCCACTGGCACCGAAAG
CCCAGGAAGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAA

Upstream 100 bases:

>100_bases
ATCCTCGCTTTTACTATGGGACCGGCTGCGTTTTATTTTGGCGCAGCCGTAATTTTGACTATTCTTGCTGTGGAATGGCT
GGACAGCCGCTTACTTTGGG

Downstream 100 bases:

>100_bases
TGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAGTGGTACATGCTCG
TGGCCCAACACACCGTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 879; Mature: 879

Protein sequence:

>879_residues
MHMSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRSNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQD
ISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGTGKEQDHFVALDTQPKYRLNN
GDLMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKV
KLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPG
GKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLT
APESYGIDTGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWIH
GGIRIRPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLH
IKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILYASETAARAVSGQIT
LHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISATGVEHLDTILQPY
INVEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRY
QHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK

Sequences:

>Translated_879_residues
MHMSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRSNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQD
ISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGTGKEQDHFVALDTQPKYRLNN
GDLMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKV
KLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPG
GKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLT
APESYGIDTGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWIH
GGIRIRPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLH
IKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILYASETAARAVSGQIT
LHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISATGVEHLDTILQPY
INVEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRY
QHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK
>Mature_879_residues
MHMSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRSNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQD
ISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGTGKEQDHFVALDTQPKYRLNN
GDLMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKV
KLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPG
GKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLT
APESYGIDTGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWIH
GGIRIRPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLH
IKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILYASETAARAVSGQIT
LHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISATGVEHLDTILQPY
INVEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRY
QHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK

Specific function: Unknown

COG id: COG3008

COG function: function code R; Paraquat-inducible protein B

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiB family [H]

Homologues:

Organism=Escherichia coli, GI87081984, Length=877, Percent_Identity=98.9737742303307, Blast_Score=1755, Evalue=0.0,
Organism=Escherichia coli, GI1787184, Length=267, Percent_Identity=31.4606741573034, Blast_Score=155, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 95368; Mature: 95368

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRSNTVTIDFMSADG
CCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEECCC
IVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLA
CCCCCCCCEECCEEECEEEECCCCCCCEEEEEEEEEHHHHHHHHHCCCEEEEEECCHHHC
GVSGLDALVGGNYIGMMPGTGKEQDHFVALDTQPKYRLNNGDLMIHLQAPDLGSLNSGSL
CCCCCHHHHCCCEEEECCCCCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCE
VYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKV
EEEEECCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHCCCCEEEEECCCCEEEECCCEE
KLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADST
EHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
PLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSAL
CCEECCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCEEEEECCEEEECCCCEEEE
LTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLTAPESYGIDTGQPLILHGVQV
EECCEEEEECCCCCCCCCEEEECCCHHEEECCCEEEEEEECCCCCCCCCCCCEEEECCHH
GQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWIH
HHHHHHHHHCCCCEEEEEECCCHHHHHCCCCEEEEECEEEEEECCCHHHHHCCCHHHHHC
GGIRIRPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKF
CCEEECCCCCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCEEEEEEE
EVGEVITVRPRANAFDIDLHIKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRA
CCCCEEEEECCCCEEEEEEEECCHHHHHHCCCCEEEECCCCEEEECCCCEEEECCHHHHH
LKGAISFDNLSGASASQRKGDKRILYASETAARAVSGQITLHAFDAGKLAVGMPIRYLGI
HHCCEEECCCCCCCCHHCCCCCEEEEECCHHHHHCCCEEEEEEECCCCEEECCCEEEECC
DIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISATGVEHLDTILQPY
CCCCEEEEEEEECCCCCCEEEEECHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCC
INVEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTG
EEECCCCCCCCCCCEEEEEEECCCHHCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEECC
MTLGTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGI
EEEECCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEECCCHHHHHHCCE
AFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK
EEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCC
>Mature Secondary Structure
MHMSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRSNTVTIDFMSADG
CCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEECCC
IVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLA
CCCCCCCCEECCEEECEEEECCCCCCCEEEEEEEEEHHHHHHHHHCCCEEEEEECCHHHC
GVSGLDALVGGNYIGMMPGTGKEQDHFVALDTQPKYRLNNGDLMIHLQAPDLGSLNSGSL
CCCCCHHHHCCCEEEECCCCCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCE
VYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKV
EEEEECCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHCCCCEEEEECCCCEEEECCCEE
KLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADST
EHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
PLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSAL
CCEECCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCEEEEECCEEEECCCCEEEE
LTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLTAPESYGIDTGQPLILHGVQV
EECCEEEEECCCCCCCCCEEEECCCHHEEECCCEEEEEEECCCCCCCCCCCCEEEECCHH
GQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWIH
HHHHHHHHHCCCCEEEEEECCCHHHHHCCCCEEEEECEEEEEECCCHHHHHCCCHHHHHC
GGIRIRPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKF
CCEEECCCCCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCEEEEEEE
EVGEVITVRPRANAFDIDLHIKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRA
CCCCEEEEECCCCEEEEEEEECCHHHHHHCCCCEEEECCCCEEEECCCCEEEECCHHHHH
LKGAISFDNLSGASASQRKGDKRILYASETAARAVSGQITLHAFDAGKLAVGMPIRYLGI
HHCCEEECCCCCCCCHHCCCCCEEEEECCHHHHHCCCEEEEEEECCCCEEECCCEEEECC
DIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISATGVEHLDTILQPY
CCCCEEEEEEEECCCCCCEEEEECHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCC
INVEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTG
EEECCCCCCCCCCCEEEEEEECCCHHCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEECC
MTLGTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGI
EEEECCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEECCCHHHHHHCCE
AFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK
EEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]