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The map label for this gene is fliC [H]

Identifier: 82543609

GI number: 82543609

Start: 1092639

End: 1094345

Strand: Direct

Name: fliC [H]

Synonym: SBO_1083

Alternate gene names: 82543609

Gene position: 1092639-1094345 (Clockwise)

Preceding gene: 82543605

Following gene: 82543610

Centisome position: 24.17

GC content: 49.62

Gene sequence:

>1707_bases
ATGGCACAAGTCATTAATACCAACAGCCTCTCGCTGATCACTCAAAATAATATCAACAAGAACCAGTCTGCGCTGTCGAG
TTCTATCGAGCGTCTGTCTTCTGGCTTGCGTATTAACAGCGCGAAGGATGACGCCGCAGGTCAGGCGATTGCTAACCGTT
TTACTTCTAATATTAAAGGCCTGACTCAGGCGGCCCGTAACGCCAACGACGGTATCTCCGTTGCGCAGACCACTGAAGGC
GCGCTGTCCGAAATCAACAACAACTTACAGCGTATTCTTGAACTGACGGTTCAGGCTTCTACCGGGACTAACTCCGATTC
GGATCTGGACTCCATTCAGGACGAAATCAAATCCCGTCTGGACGAAATTGACCGCGTATCTGGCCAGACCCAGTTCAACG
GCGTGAACGTACTGGCGAAAGACGGTTCAATGAAAATTCAGGTTGGTGCGAATGACGGCCAGACTATCACGATTGATCTG
AAGAAAATTGACTCAGATACGCTGGGGCTGAATGGTTTTAACGTGAATGGCAAAGGCACTATTGCGAACAAAGCTGCTAC
AGTCAGCGATCTGACCGCTGCTGGTGCAACGGGAACAGGTCCTTATGCTGTGACCACAAACAATACAGCACTCAGCGCTA
GCGATGCACTGTCTCGCCTGAAAACCGGAGATACAGTTACTACTACTGGCTCGAGTGCTGCGATCTATACTTATGATGCG
GCTAAAGGGAACTTCACCACTCAAGCAACAGTTGCAGATGGCGATGTTGTTAACTTTGCGAATACTCTGAAACCAGCGGC
TGGCACTACTGCATCAGGTGTTTATACTCGTAGTACTGGTGATGTGAAGTTTGATGTAGATGCTAATGGCGATGTGACCA
TCGGTGGTAAAGCCGCGTACCTGGACGCCACTGGTAACCTATCTACAAACAACGCCGGCATTGCATCTTCAGCGAAATTG
TCCGATCTGTTTGCTAGCGGTAGTACCTTAGCGACAACTGGTTCTATCCAGTTGTCTGGCACAACTTATAACTTTGGTGC
AGCGGCAACTTCTGGCGTAACCTACACCAAAACTGTAAGCGCTGATACTGTACTGAGCACAGTGCAGAGTGCTGCAACGG
CTAACACAGCAGTTACTGGTGCGACAATTAAGTATAATACAGGTATTCAGTCTGCAACGGCGTCCTTCGGTGGTGCGAAT
ACTAATGGTGCTGGTAATTCGAATGACACCTATACTGATGCAGACAAAGAGCTCACCACAACCGCATCTTACACTATCAA
CTACAACGTCGATAAGGATACCGGTACAGTAACTGTAGCTTCAAATGGCGCAGGTGCAACTGGTAAATTTGCAGCTACTG
TTGGGGCACAGGCTTATGTTAACTCTACAGGCAAACTGACCACTGAAACCACCAGTGCAGGCACTGCAACCAAAGATCCT
CTGGCTGCCCTGGATGAAGCTATCAGCTCCATCGACAAATTCCGTTCATCCCTGGGTGCTATTCAGAACCGTCTGGATTC
TGCAGTCACCAACCTGAACAACACCACTACCAACCTGTCTGAAGCGCAGTCCCGTATTCAGGACGCCGACTATGCGACCG
AAGTGTCCAACATGTCGAAAGCGCAGATCATCCAGCAGGCCGGTAACTCCGTGCTGGCAAAAGCCAACCAGGTACCGCAG
CAGGTTCTGTCTCTGCTGCAGGGTTAA

Upstream 100 bases:

>100_bases
AGGTTGTTTTACGACAGACGATAACAGGGTTGACGGCGATTGAGCCGACGGGTGGAAACCCAATACGTAATCAACGACTT
GCAATATAGGATAACGAATC

Downstream 100 bases:

>100_bases
TCGTCGTAACCTGATTAACTGAGACTGACGGCAACGCCAAATTGCCTGATGCGCTGCACTTATCAGGCCTACAAGGTGAA
TTGCAATTTATTGAATTTGC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG
ALSEINNNLQRILELTVQASTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDL
KKIDSDTLGLNGFNVNGKGTIANKAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAAIYTYDA
AKGNFTTQATVADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNNAGIASSAKL
SDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSAATANTAVTGATIKYNTGIQSATASFGGAN
TNGAGNSNDTYTDADKELTTTASYTINYNVDKDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDP
LAALDEAISSIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQ
QVLSLLQG

Sequences:

>Translated_568_residues
MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG
ALSEINNNLQRILELTVQASTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDL
KKIDSDTLGLNGFNVNGKGTIANKAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAAIYTYDA
AKGNFTTQATVADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNNAGIASSAKL
SDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSAATANTAVTGATIKYNTGIQSATASFGGAN
TNGAGNSNDTYTDADKELTTTASYTINYNVDKDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDP
LAALDEAISSIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQ
QVLSLLQG
>Mature_567_residues
AQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGA
LSEINNNLQRILELTVQASTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLK
KIDSDTLGLNGFNVNGKGTIANKAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAAIYTYDAA
KGNFTTQATVADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNNAGIASSAKLS
DLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSAATANTAVTGATIKYNTGIQSATASFGGANT
NGAGNSNDTYTDADKELTTTASYTINYNVDKDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDPL
AALDEAISSIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQ
VLSLLQG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=332, Percent_Identity=62.3493975903614, Blast_Score=329, Evalue=3e-91,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 57773; Mature: 57642

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG
CCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LTQAARNANDGISVAQTTEGALSEINNNLQRILELTVQASTGTNSDSDLDSIQDEIKSRL
HHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHH
DEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGT
HHHHHHCCCCEECCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEECCCCCE
IANKAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAAIYTYDA
ECCCCCCHHHHHHCCCCCCCCEEEEECCCEECHHHHHHHHCCCCEEEECCCCEEEEEEEC
AKGNFTTQATVADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAY
CCCCCEEEEEECCCCEEHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCEEECCEEEE
LDATGNLSTNNAGIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVS
EECCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECEEEECCCEEECCCCCCCCEEEEEECC
ADTVLSTVQSAATANTAVTGATIKYNTGIQSATASFGGANTNGAGNSNDTYTDADKELTT
HHHHHHHHHHHHCCCCEEECEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE
TASYTINYNVDKDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDP
EEEEEEEEEECCCCCEEEEECCCCCCCCCEEEECCCHHEECCCCCEEEECCCCCCCCCCH
LAALDEAISSIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCHH
AQIIQQAGNSVLAKANQVPQQVLSLLQG
HHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG
CEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LTQAARNANDGISVAQTTEGALSEINNNLQRILELTVQASTGTNSDSDLDSIQDEIKSRL
HHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHH
DEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGT
HHHHHHCCCCEECCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEECCCCCE
IANKAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAAIYTYDA
ECCCCCCHHHHHHCCCCCCCCEEEEECCCEECHHHHHHHHCCCCEEEECCCCEEEEEEEC
AKGNFTTQATVADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAY
CCCCCEEEEEECCCCEEHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCEEECCEEEE
LDATGNLSTNNAGIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVS
EECCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECEEEECCCEEECCCCCCCCEEEEEECC
ADTVLSTVQSAATANTAVTGATIKYNTGIQSATASFGGANTNGAGNSNDTYTDADKELTT
HHHHHHHHHHHHCCCCEEECEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE
TASYTINYNVDKDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDP
EEEEEEEEEECCCCCEEEEECCCCCCCCCEEEECCCHHEECCCCCEEEECCCCCCCCCCH
LAALDEAISSIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCHH
AQIIQQAGNSVLAKANQVPQQVLSLLQG
HHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8057852; 12384590; 12704152 [H]