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The map label for this gene is yedD [H]

Identifier: 82543605

GI number: 82543605

Start: 1088154

End: 1088567

Strand: Direct

Name: yedD [H]

Synonym: SBO_1078

Alternate gene names: 82543605

Gene position: 1088154-1088567 (Clockwise)

Preceding gene: 82543601

Following gene: 82543609

Centisome position: 24.08

GC content: 56.52

Gene sequence:

>414_bases
ATGAAAAAACTCGCAATTGCAGGCGCGCTCATGTTGCTGGCGGGCTGTGCCGAAGTCGAAAACTATAACAATGTCGTGAA
AACCCCCGCGCCGGACTGGCTGGCGGGCTACTGGCAGACCAAAGGGCCGCAACGTGCGCTGGTCAGTCCGGAAGCGATAG
GCAGCCTGATTGTCACTAAAGAGGGTGATACTCTGGATTGCCGTCAGTGGCAGCGGGTGATTGCTGTGCCGGGTAAGTTG
GCATTGATGTCTGATGATCTCACTAACGTTACCGTAAAACGTGAGCTGTACGAGGTTGAGCGTGACGGTAACACCATTGA
GTACGATGGTATGACGATGGAGCGTGTGGATCGCCCGACGGCAGAGTGTGCCGCCGCGCTGGATAAAGCGCCGTTACCGA
CGCCACTGCCGTAA

Upstream 100 bases:

>100_bases
AAAATAATAGTTAGATCAAATTTCTCTCTGAACCTGGAAAGGCTGGCGACATCAGGGCTTTAATGCCACAATCCTCTTTT
CTTCTCATGCAGGACGAATG

Downstream 100 bases:

>100_bases
TGAAATCTCCCCGGCTTGCCGCCGGGGATGAATTTAAATCACCTCTTCGATAACCCACACGCTGACGCTGCCGCCGTTGC
AAAAGAAGGTTGCTTCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKL
ALMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP

Sequences:

>Translated_137_residues
MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKL
ALMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP
>Mature_137_residues
MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKL
ALMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788237, Length=137, Percent_Identity=98.5401459854015, Blast_Score=276, Evalue=3e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14971; Mature: 14971

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK
CCCHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCCCCCCCCHHHHCEEEEEC
EGDTLDCRQWQRVIAVPGKLALMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT
CCCEECHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCEEHHHHCCCH
AECAAALDKAPLPTPLP
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK
CCCHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCCCCCCCCHHHHCEEEEEC
EGDTLDCRQWQRVIAVPGKLALMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT
CCCEECHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCEEHHHHCCCH
AECAAALDKAPLPTPLP
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]