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The map label for this gene is insD1 [C]

Identifier: 82543578

GI number: 82543578

Start: 1060057

End: 1060353

Strand: Direct

Name: insD1 [C]

Synonym: SBO_1044

Alternate gene names: 82543578

Gene position: 1060057-1060353 (Clockwise)

Preceding gene: 82543577

Following gene: 82543579

Centisome position: 23.45

GC content: 50.17

Gene sequence:

>297_bases
GTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACC
GAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCA
GTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGCCAACCATCTTGCCGTAGAAATC
AACTTTATTGCCATCTTTATTGTAAATTTCAGCCGCATTTGCTGCGCCAGCAACTAA

Upstream 100 bases:

>100_bases
AAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGAAAATCGATACTGGAAAAACTCTAACTCGGTGGCCA
GTTTTTGTTGACCACTTCAA

Downstream 100 bases:

>100_bases
TAACGCCGGGACCAGCATTGCCAGAACTTTTCTTTTCATTATGTATTCCCTTGTGATTATAATCTTCATGAATATATCAA
TAAGTGCCGTTATCCAAAAA

Product: IS2 ORF2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFANHLAVEI
NFIAIFIVNFSRICCASN

Sequences:

>Translated_98_residues
MEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFANHLAVEI
NFIAIFIVNFSRICCASN
>Mature_98_residues
MEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFANHLAVEI
NFIAIFIVNFSRICCASN

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=75, Percent_Identity=94.6666666666667, Blast_Score=154, Evalue=1e-39,
Organism=Escherichia coli, GI1789424, Length=75, Percent_Identity=94.6666666666667, Blast_Score=154, Evalue=1e-39,
Organism=Escherichia coli, GI1789224, Length=75, Percent_Identity=94.6666666666667, Blast_Score=154, Evalue=1e-39,
Organism=Escherichia coli, GI1788305, Length=75, Percent_Identity=94.6666666666667, Blast_Score=154, Evalue=1e-39,
Organism=Escherichia coli, GI1787669, Length=75, Percent_Identity=94.6666666666667, Blast_Score=154, Evalue=1e-39,
Organism=Escherichia coli, GI1786558, Length=75, Percent_Identity=94.6666666666667, Blast_Score=154, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10915; Mature: 10915

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPD
CCEECCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
GLTAAKNLAEAFANHLAVEINFIAIFIVNFSRICCASN
CCHHHHHHHHHHHHHHEEHHHHHHHEEHHHHHHHCCCC
>Mature Secondary Structure
MEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPD
CCEECCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
GLTAAKNLAEAFANHLAVEINFIAIFIVNFSRICCASN
CCHHHHHHHHHHHHHHEEHHHHHHHEEHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA