Click here to switch to the map view.

The map label for this gene is insO2 [H]

Identifier: 82543577

GI number: 82543577

Start: 1059209

End: 1059865

Strand: Direct

Name: insO2 [H]

Synonym: SBO_1043

Alternate gene names: 82543577

Gene position: 1059209-1059865 (Clockwise)

Preceding gene: 82543576

Following gene: 82543578

Centisome position: 23.43

GC content: 56.32

Gene sequence:

>657_bases
GTGGTCACACTCTGCCAAGTGTTCGGGGTTCATCGCAGCAGCTACAGATACTGGAAAAACCGTCCTGAAAAACCAGACGG
CAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACATGGCATCAGCCATGGTTCGGCCGGAGCAAGAAGCATCGCCA
CAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGT
CAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAACATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGT
GACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTGTATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTC
TCGACCTGTTCGCAATAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAA
ATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGAGCAGGGCAGTCATTATACGAGCAGGCAGTT
CCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCAATGGAACG
CTTCTTCAGGAGTCTGA

Upstream 100 bases:

>100_bases
TTGAAATGGAGAATGAAATATTAAAAAAGGCTACCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGA
AACTCAGAGCGCATTATCCT

Downstream 100 bases:

>100_bases
AGAACGAATGGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACGGACTATATCGTTGGATAT
TACAGCGCACTAAGACCGCA

Product: IS911 ORF2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MVTLCQVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTCIWTGKRWAYLAVVLDLFAIKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSEQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSQWNASSGV

Sequences:

>Translated_218_residues
MVTLCQVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTCIWTGKRWAYLAVVLDLFAIKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSEQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSQWNASSGV
>Mature_218_residues
MVTLCQVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTCIWTGKRWAYLAVVLDLFAIKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSEQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSQWNASSGV

Specific function: Involved in the transposition of the insertion sequence IS911B [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=222, Percent_Identity=27.4774774774775, Blast_Score=100, Evalue=1e-21,
Organism=Escherichia coli, GI1789981, Length=208, Percent_Identity=31.25, Blast_Score=103, Evalue=6e-24,
Organism=Escherichia coli, GI1788405, Length=214, Percent_Identity=30.8411214953271, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787263, Length=214, Percent_Identity=30.8411214953271, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1786753, Length=214, Percent_Identity=30.8411214953271, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1786570, Length=214, Percent_Identity=30.8411214953271, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1786490, Length=214, Percent_Identity=30.8411214953271, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 25107; Mature: 25107

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLCQVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRG
CCCHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
YQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTC
HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEECCHHHHHHEECCCCCEEEECCEEE
IWTGKRWAYLAVVLDLFAIKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSEQGS
EEECCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCC
HYTSRQFRQLLWRYQIRQSMSRRGNCWDNSQWNASSGV
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVTLCQVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRG
CCCHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
YQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTC
HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEECCHHHHHHEECCCCCEEEECCEEE
IWTGKRWAYLAVVLDLFAIKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSEQGS
EEECCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCC
HYTSRQFRQLLWRYQIRQSMSRRGNCWDNSQWNASSGV
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]