| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82543556
Identifier: 82543556
GI number: 82543556
Start: 1039505
End: 1039708
Strand: Reverse
Name: 82543556
Synonym: SBO_1020
Alternate gene names: NA
Gene position: 1039708-1039505 (Counterclockwise)
Preceding gene: 82543557
Following gene: 82543553
Centisome position: 23.0
GC content: 53.43
Gene sequence:
>204_bases ATGGTGGAAAGAACCATGGCATTTAAACACTATGATGTTGTCAGGGCGGCGCCGCCGTCAGATCTTGCGGAAAAGCTGAC ACATAAACTGAAAGAGGGCTGGCAGCCGTTTGGTAGTCCGGTGGCCATAACCCCTTATACCCTGATGCAGGCGATTGCAG CAGAAGGTGATGTGGTGGTCAGTGGTGCAACTGAGCCGGAGTGA
Upstream 100 bases:
>100_bases TATCCATGCATATCTGCTTGATAATCAGGTTTTTATTTAAGGTATGGTTTTGTGTTTTTTCTGTATTACATGTCAGGTAT TTTAAAGAATTATTTTTCAG
Downstream 100 bases:
>100_bases TACTACGTCATCGTACTGGCCCGGCATTCCAGGCCATAAAAGACAGTCTGGCAGTGGGACTAAATGCACTGACGCTGACG GATATTACCAAAAATGCAAC
Product: unknown protein encoded within prophage
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MVERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVVSGATEPE
Sequences:
>Translated_67_residues MVERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVVSGATEPE >Mature_67_residues MVERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVVSGATEPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7284; Mature: 7284
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVV CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHCCCCEEE SGATEPE ECCCCCC >Mature Secondary Structure MVERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVV CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHCCCCEEE SGATEPE ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA