| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is bglX [H]
Identifier: 82543548
GI number: 82543548
Start: 1030748
End: 1033045
Strand: Direct
Name: bglX [H]
Synonym: SBO_1012
Alternate gene names: 82543548
Gene position: 1030748-1033045 (Clockwise)
Preceding gene: 82543546
Following gene: 82543549
Centisome position: 22.81
GC content: 54.18
Gene sequence:
>2298_bases ATGAAATGGCTATGTTCAGTAGGAATCGCGGTGAGTCTGGCCCTGCAGCCAGCACTGGCGGATGATTTATTCGGCAACCA TCCATTCACGCCCGAAGCGCGGGATGCGTTCGTCACCGAATTGCTTAAGAAAATGACAGTTGATGAGAAAATTGGTCAGC TGCGCTTAATCAGCGTCGGCCCGGATAACCCGAAAGAGGCGATCCGCGAGATGATCAAAGACGGTCAGGTTGGGGCGATT TTCAACACCGTAACCCGTCAGGATATCCGCGCCATGCAGGATCAGGTGATGGAATTAAGCCGCCTGAAAATTCCTCTTTT CTTTGCTTACGACGTGCTGCACGGTCAGCGCACGGTGTTCCCGATTAGCCTCGGTCTGGCCTCGTCTTTTAACCTCGATG CAGTGAAAACGGTCGGACGTGTCTCTGCTTATGAAGCGGCAGATGATGGCCTGAATATGACCTGGGCACCGATGGTCGAT GTCTCGCGCGATCCGCGCTGGGGACGTGCTTCCGAAGGTTTTGGCGAAGATACGTATCTCACCTCAACAATGGGTAAAAC CATGGTGGAAGCGATGCAGGGTAAAAGCCCGGCAGATCGCTACTCGGTGATGACCAGCGTCAAACACTTTGCCGCATACG GCGCGGTAGAAGGCGGTAAAGAGTACAACACCGTCGATATGAGTCCGCAGCGCCTGTTTAATGATTATATGCCGCCGTAC AAAGCGGGGCTGGACGCAGGCAGCGGCGCGGTGATGGTGGCGCTGAACTCGCTGAACGGCACGCCAGCCACCTCCGATTC CTGGCTGCTGAAAGATGTTCTGCGCGACCAGTGGGGCTTTAAAGGCATCACCGTTTCCGATCACGGTGCAATCAAAGAGC TGATTAAACATGGCACGGCGGCAGACCCGGAAGATGCGGTGCGCGTGGCGCTGAAATCCGGAATCAACATGAGTATGAGC GACGAGTATTACTCGAAGTATCTGCCTGGGTTGATCAAATCCGGCAAAGTGACGATGGAAGAGCTGGACGATGCTGCCCG CCATGTACTGAACGTTAAATATGATATGGGATTGTTTAACGACCCATACAGCCATTTGGGGCCGAAAGAGTCTGACCCGG TGGATACCAATGCCGAAAGCCGCCTGCACCGTAAAGAAGCACGTGAAGTGGCGCGCGAAAGCCTGGTGTTGCTGAAAAAC CGTCTCGAAACGTTACCGCTGAAAAAATCGGCCACCATTGCGGTGGTTGGGCCACTGGCGGACAGTAAACGCGACGTGAT GGGCAGCTGGTCCGCAGCCGGTGTTGCCGATCAATCCGTGACCGTACTGACCGGGATTAAAAATGCCGTCGGTGAAAACG GTAAAGTGCTGTATGCCAAAGGGGCGAACGTTACCAGTGACAAAGGCATTATCGATTTCCTGAATCAGTATGAAGAAGCG GTCAAAGTCGATCCGCGCTCGCCGCAAGAGATGATTGATGAAGCGGTGCAGACGGCGAAACAATCTGATATGGTGGTGGC TGTGGTCGGTGAAGCACAGGGGATGGCGCACGAGGCCTCCAGCCGTACCGATATCACTATTCCGCAAAGCCAACGTGACT TGATTGCGGCGCTGAAAGCCACCGGTAAACCGCTGGTGCTGGTGCTGATGAACGGGCGTCCGCTGGCGCTGGTGAAAGAA GATCAGCAGGCTGATGCGATTCTGGAAACCTGGTTTGCGGGGACTGAAGGCGGTAATGCAATTGCCGATGTGTTGTTTGG CGATTACAACCCGTCCGGCAAGCTGCCGATGTCCTTCCCGCGTTCTGTCGGGCAGATCCCGGTGTACTACAGCCATCTGA ACACCGGTCGTCCGTATAATGCCGACAAGCCGAACAAATACACTTCGCGTTATTTTGATGAAGCTAACGGGGCGCTTTAT CCGTTCGGCTATGGTCTGAGCTATACCACTTTCACCGTCTCTGATGTGAAACTTTCTGCGCCGACCATGAAGCGTGACGG CAAAGTGACGGCCAGCGTGCAGGTGACGAACACCGGTAAACGCGAAGGGGCCACGGTAGTACAGATGTACTTGCAGGATG TGACGGCTTCCATGAGCCGTCCAGTGAAGCAGCTGAAAGGCTTTGAGAAAATCACCCTGAAACCGGGCGAAACTCAGACT GTCAGCTTCCCGATTGATATCGAGGCGCTGAAGTTCTGGAATCAACAGATGAAATATGACGCCGAGCCTGGCAAGTTCAA TGTCTTTATCGGCACTGATTCCGCACGCGTTAAGAAAGGCGAGTTTGAGTTGCTGTAA
Upstream 100 bases:
>100_bases AACTGAGCATTCTTTTTCTCTCTCCATCATGCTTATGGCAAACTACGGTTTTTGCACCATTTTCGCTGCCTCGTCGGGCA ACAGAGGAAGAAAAATCCAT
Downstream 100 bases:
>100_bases TGCTTTAGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGACCTTTGTAGGC CGGATAAGGCGTTTACGCCG
Product: beta-D-glucoside glucohydrolase, periplasmic
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 765; Mature: 765
Protein sequence:
>765_residues MKWLCSVGIAVSLALQPALADDLFGNHPFTPEARDAFVTELLKKMTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAI FNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD VSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMS DEYYSKYLPGLIKSGKVTMEELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKN RLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNAVGENGKVLYAKGANVTSDKGIIDFLNQYEEA VKVDPRSPQEMIDEAVQTAKQSDMVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKE DQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALY PFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL
Sequences:
>Translated_765_residues MKWLCSVGIAVSLALQPALADDLFGNHPFTPEARDAFVTELLKKMTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAI FNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD VSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMS DEYYSKYLPGLIKSGKVTMEELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKN RLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNAVGENGKVLYAKGANVTSDKGIIDFLNQYEEA VKVDPRSPQEMIDEAVQTAKQSDMVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKE DQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALY PFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL >Mature_765_residues MKWLCSVGIAVSLALQPALADDLFGNHPFTPEARDAFVTELLKKMTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAI FNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD VSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMS DEYYSKYLPGLIKSGKVTMEELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKN RLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNAVGENGKVLYAKGANVTSDKGIIDFLNQYEEA VKVDPRSPQEMIDEAVQTAKQSDMVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKE DQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALY PFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=765, Percent_Identity=99.6078431372549, Blast_Score=1568, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 83585; Mature: 83585
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWLCSVGIAVSLALQPALADDLFGNHPFTPEARDAFVTELLKKMTVDEKIGQLRLISVG CCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC PDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVF CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCEEE PISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTYL EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECEEECCCCCCCCCCCCCCCCCCEE TSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCH KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTA HHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCC ADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKSGKVTMEELDDAARHVLNVKYDMGLFN CCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHCCCEEHHHHHHHHHHHEEEEECCCCCC DPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKNRLETLPLKKSATIAVVGPLA CCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC DSKRDVMGSWSAAGVADQSVTVLTGIKNAVGENGKVLYAKGANVTSDKGIIDFLNQYEEA CCCHHHCCCCCCCCCCCCCEEEEEHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHH VKVDPRSPQEMIDEAVQTAKQSDMVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKA HCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCEEECCCCHHHHHHHHHC TGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFP CCCCEEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEHHEECCCCCCCCCCCCCC RSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSA CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEEEECEEECC PTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEE VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL EEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCC >Mature Secondary Structure MKWLCSVGIAVSLALQPALADDLFGNHPFTPEARDAFVTELLKKMTVDEKIGQLRLISVG CCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC PDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVF CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCEEE PISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTYL EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECEEECCCCCCCCCCCCCCCCCCEE TSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCH KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTA HHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCC ADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKSGKVTMEELDDAARHVLNVKYDMGLFN CCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHCCCEEHHHHHHHHHHHEEEEECCCCCC DPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKNRLETLPLKKSATIAVVGPLA CCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC DSKRDVMGSWSAAGVADQSVTVLTGIKNAVGENGKVLYAKGANVTSDKGIIDFLNQYEEA CCCHHHCCCCCCCCCCCCCEEEEEHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHH VKVDPRSPQEMIDEAVQTAKQSDMVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKA HCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCEEECCCCHHHHHHHHHC TGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFP CCCCEEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEHHEECCCCCCCCCCCCCC RSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSA CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEEEECEEECC PTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEE VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL EEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]