| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yehR [H]
Identifier: 82543490
GI number: 82543490
Start: 978786
End: 979259
Strand: Direct
Name: yehR [H]
Synonym: SBO_0946
Alternate gene names: 82543490
Gene position: 978786-979259 (Clockwise)
Preceding gene: 82543489
Following gene: 82543494
Centisome position: 21.66
GC content: 41.98
Gene sequence:
>474_bases ATGGAGTTTTACATGAAGGCTTTCAATAAGCTGTTTTCCCTCGTTGTTGCATCTGTTCTGGTTTTCTCTCTTGCTGGCTG CGGTGACAAAGAAGAATCGAAGAAATTCAGCGCCAATCTGAACGGCACTGAAATTGCCATTACCTATGTCTACAAAGGTG ACAAGGTGCTTAAGCAATCTTCTGAAACCAAAATTCAATTTGCCTCCATTAGTGCAACCACCAAAGAAGATGCTGCCAAG ACACTTGAGCCGTTAAGCGCCAAATACAAAAACATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCA GGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTCTGCTGAAG ATGCCAAAAAAGGTATCACTATGGCGCAAATGGAACTGGTGATGAAAGCCGCTGGTTTTAAAGAAGTGAAATAA
Upstream 100 bases:
>100_bases TACTAAGAGTTCTACTCCAGTTCCGGACTGCTCACGCCACGGTATTAGGCATATCCTATATAGCCCCTGGTGAGAGTCAC CAGTTTCTTGATTAAATAAA
Downstream 100 bases:
>100_bases TCTGTCGGCGGCCATGTTTCGTATGGCCGCCATACCCGTCTTAGCTTTTCTTCACATGCTGGCGCGCTGCCAGTCCACGC AGAAAATAACGTAAAAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MEFYMKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASISATTKEDAAK TLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK
Sequences:
>Translated_157_residues MEFYMKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASISATTKEDAAK TLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK >Mature_157_residues MEFYMKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASISATTKEDAAK TLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK
Specific function: Unknown
COG id: COG4808
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To L.monocytogenes lmo0207 [H]
Homologues:
Organism=Escherichia coli, GI87082051, Length=153, Percent_Identity=99.3464052287582, Blast_Score=300, Evalue=3e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009736 [H]
Pfam domain/function: PF06998 DUF1307 [H]
EC number: NA
Molecular weight: Translated: 17195; Mature: 17195
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFYMKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEEEEEECCCHHHHCC SETKIQFASISATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFK CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCEECCCCCCCCCEEEHHHHHHH ALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK HHCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEFYMKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEEEEEECCCHHHHCC SETKIQFASISATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFK CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCEECCCCCCCCCEEEHHHHHHH ALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK HHCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]