Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yehR [H]

Identifier: 82543490

GI number: 82543490

Start: 978786

End: 979259

Strand: Direct

Name: yehR [H]

Synonym: SBO_0946

Alternate gene names: 82543490

Gene position: 978786-979259 (Clockwise)

Preceding gene: 82543489

Following gene: 82543494

Centisome position: 21.66

GC content: 41.98

Gene sequence:

>474_bases
ATGGAGTTTTACATGAAGGCTTTCAATAAGCTGTTTTCCCTCGTTGTTGCATCTGTTCTGGTTTTCTCTCTTGCTGGCTG
CGGTGACAAAGAAGAATCGAAGAAATTCAGCGCCAATCTGAACGGCACTGAAATTGCCATTACCTATGTCTACAAAGGTG
ACAAGGTGCTTAAGCAATCTTCTGAAACCAAAATTCAATTTGCCTCCATTAGTGCAACCACCAAAGAAGATGCTGCCAAG
ACACTTGAGCCGTTAAGCGCCAAATACAAAAACATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCA
GGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTCTGCTGAAG
ATGCCAAAAAAGGTATCACTATGGCGCAAATGGAACTGGTGATGAAAGCCGCTGGTTTTAAAGAAGTGAAATAA

Upstream 100 bases:

>100_bases
TACTAAGAGTTCTACTCCAGTTCCGGACTGCTCACGCCACGGTATTAGGCATATCCTATATAGCCCCTGGTGAGAGTCAC
CAGTTTCTTGATTAAATAAA

Downstream 100 bases:

>100_bases
TCTGTCGGCGGCCATGTTTCGTATGGCCGCCATACCCGTCTTAGCTTTTCTTCACATGCTGGCGCGCTGCCAGTCCACGC
AGAAAATAACGTAAAAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MEFYMKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASISATTKEDAAK
TLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK

Sequences:

>Translated_157_residues
MEFYMKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASISATTKEDAAK
TLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK
>Mature_157_residues
MEFYMKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASISATTKEDAAK
TLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK

Specific function: Unknown

COG id: COG4808

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To L.monocytogenes lmo0207 [H]

Homologues:

Organism=Escherichia coli, GI87082051, Length=153, Percent_Identity=99.3464052287582, Blast_Score=300, Evalue=3e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009736 [H]

Pfam domain/function: PF06998 DUF1307 [H]

EC number: NA

Molecular weight: Translated: 17195; Mature: 17195

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFYMKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEEEEEECCCHHHHCC
SETKIQFASISATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFK
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCEECCCCCCCCCEEEHHHHHHH
ALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK
HHCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEFYMKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEEEEEECCCHHHHCC
SETKIQFASISATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFK
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCEECCCCCCCCCEEEHHHHHHH
ALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK
HHCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]