Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is 82542700

Identifier: 82542700

GI number: 82542700

Start: 93269

End: 94567

Strand: Reverse

Name: 82542700

Synonym: SBO_0084

Alternate gene names: NA

Gene position: 94567-93269 (Counterclockwise)

Preceding gene: 82542704

Following gene: 82542679

Centisome position: 2.09

GC content: 53.19

Gene sequence:

>1299_bases
TTGATCATCGTATTATCTCGCCAAATTACCTATCCAACCGAAGTGTACTATACATTCGGCGGGCCAGTTTACCACAAAGA
GCCTCGAAACCCAAATTCCAGTCAATTCTTAATCAGCTTGCTTACGTACGAATGCTGGGATATCCAGATAATCCGGCTCT
TTCGCAGTTTGCGGCGCATTGTCATTCACTACTTTAGCGACCGGCTTCTGCTCCTGGGTCAGCGGAGCCATCCCATGCTG
CTGGTAGCGATCCATCACTGGCTGCTGAACCTGCTTATTGGTCACCAGAGTGATTTCAGGACGTTTGTCCATGCCGATCC
CTGTCGCAACAACGGTTACGCGCAGCTCGTCATTCATATCCGGGTCAAGAGAAGTACCGATAACCACAGTCGCGTTGCCG
GAAGCAAATGCACGGATGGTGTTACCTACCGTTTCGACCTCAACCAGACCCAGGTCGAAGCCCGCCGTGATGTTAACCAG
CACGCCGCGCGCGCCAGACAGGTCGATATCTTCCAGCAGCGGAGAAGAGATAGCCATTTCAGCAGCTTCTTCCGCACGGT
TTTCACCGCTCGCCACGCCAGAACCCATCATTGCGTAGCCCATTTCAGACATTACGGTGCGTACGTCTGCAAAGTCCACG
TTCATCAAACCCGGACGAGTAATCAGTTCGGCGATACCTTGCACAGCGCCTTTCAGTACATCGTTCGCTGCGCCAAACGC
ATCCAGCAGGGAGATACCGCGGCCCAGAACTTTCAGCAGTTTGTCGTTCGGGATAGTGATCAGAGAGTCCACATGCTTGG
ACAGTTCAGTGATCCCCTGCTCGGCGAATGCCATACGCTTCTTGCCTTCAAAGTTGAAAGGCTTAGTGACGACAGCAACG
GTCAGGATACCCAAATCTTTTGCCACTTCAGCGACGACTGGTGCTGCACCTGTACCGGTACCACCACCCATACCCGCAGC
AATAAAGACCATGTCTGCACCTTCCAGCGCCGCACGCAATGCATCGCGATCCTCATCAGCCGCATTGCGGCCAACTTCTG
GATTAGCGCCAGCGCCCAGTCCTTTGGTGATACCGCTACCGATTTGAATCGTCTGTCCAACCGCTGTTTTACGCAGCGCT
TGTGCATCGGTATTTACCGCGAAGAATTCAACACCTTCAATACGCTCGCGCACCATGTGTTCAACAGCATTACCGCCGCC
GCCGCCGACGCCGATGACTTTAATCACCGCGTCATTGGTAAGTTCCATTGGTTCAAACATAGTTTCTCTCCGATTTGTGC
CTGTCGCCTGAGTCCGTAA

Upstream 100 bases:

>100_bases
CCCGGTGTTGGCCGGCGCAGGGCGTAACGTCAGAGTGACTTTCTTGCCGGTATGTAAACCGACACCCGTCGCCTGAACGA
TACGTTTAAGTGTCCTTTGT

Downstream 100 bases:

>100_bases
TCATCGTCGGCCTCATAAAAATTAAAACTCTTTTCGCAGCCAACTATTGAGTCGCTTGATCCACGAGCCAACTGATGCTG
TAACACGTTTTTCTACTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MIIVLSRQITYPTEVYYTFGGPVYHKEPRNPNSSQFLISLLTYECWDIQIIRLFRSLRRIVIHYFSDRLLLLGQRSHPML
LVAIHHWLLNLLIGHQSDFRTFVHADPCRNNGYAQLVIHIRVKRSTDNHSRVAGSKCTDGVTYRFDLNQTQVEARRDVNQ
HAARARQVDIFQQRRRDSHFSSFFRTVFTARHARTHHCVAHFRHYGAYVCKVHVHQTRTSNQFGDTLHSAFQYIVRCAKR
IQQGDTAAQNFQQFVVRDSDQRVHMLGQFSDPLLGECHTLLAFKVERLSDDSNGQDTQIFCHFSDDWCCTCTGTTTHTRS
NKDHVCTFQRRTQCIAILISRIAANFWISASAQSFGDTATDLNRLSNRCFTQRLCIGIYREEFNTFNTLAHHVFNSITAA
AADADDFNHRVIGKFHWFKHSFSPICACRLSP

Sequences:

>Translated_432_residues
MIIVLSRQITYPTEVYYTFGGPVYHKEPRNPNSSQFLISLLTYECWDIQIIRLFRSLRRIVIHYFSDRLLLLGQRSHPML
LVAIHHWLLNLLIGHQSDFRTFVHADPCRNNGYAQLVIHIRVKRSTDNHSRVAGSKCTDGVTYRFDLNQTQVEARRDVNQ
HAARARQVDIFQQRRRDSHFSSFFRTVFTARHARTHHCVAHFRHYGAYVCKVHVHQTRTSNQFGDTLHSAFQYIVRCAKR
IQQGDTAAQNFQQFVVRDSDQRVHMLGQFSDPLLGECHTLLAFKVERLSDDSNGQDTQIFCHFSDDWCCTCTGTTTHTRS
NKDHVCTFQRRTQCIAILISRIAANFWISASAQSFGDTATDLNRLSNRCFTQRLCIGIYREEFNTFNTLAHHVFNSITAA
AADADDFNHRVIGKFHWFKHSFSPICACRLSP
>Mature_432_residues
MIIVLSRQITYPTEVYYTFGGPVYHKEPRNPNSSQFLISLLTYECWDIQIIRLFRSLRRIVIHYFSDRLLLLGQRSHPML
LVAIHHWLLNLLIGHQSDFRTFVHADPCRNNGYAQLVIHIRVKRSTDNHSRVAGSKCTDGVTYRFDLNQTQVEARRDVNQ
HAARARQVDIFQQRRRDSHFSSFFRTVFTARHARTHHCVAHFRHYGAYVCKVHVHQTRTSNQFGDTLHSAFQYIVRCAKR
IQQGDTAAQNFQQFVVRDSDQRVHMLGQFSDPLLGECHTLLAFKVERLSDDSNGQDTQIFCHFSDDWCCTCTGTTTHTRS
NKDHVCTFQRRTQCIAILISRIAANFWISASAQSFGDTATDLNRLSNRCFTQRLCIGIYREEFNTFNTLAHHVFNSITAA
AADADDFNHRVIGKFHWFKHSFSPICACRLSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50131; Mature: 50131

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIVLSRQITYPTEVYYTFGGPVYHKEPRNPNSSQFLISLLTYECWDIQIIRLFRSLRRI
CEEEEECCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VIHYFSDRLLLLGQRSHPMLLVAIHHWLLNLLIGHQSDFRTFVHADPCRNNGYAQLVIHI
HHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHCCCCHHCEEEECCCCCCCCEEEEEEEE
RVKRSTDNHSRVAGSKCTDGVTYRFDLNQTQVEARRDVNQHAARARQVDIFQQRRRDSHF
EEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
SSFFRTVFTARHARTHHCVAHFRHYGAYVCKVHVHQTRTSNQFGDTLHSAFQYIVRCAKR
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
IQQGDTAAQNFQQFVVRDSDQRVHMLGQFSDPLLGECHTLLAFKVERLSDDSNGQDTQIF
HHCCCHHHHHHHHHHHCCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE
CHFSDDWCCTCTGTTTHTRSNKDHVCTFQRRTQCIAILISRIAANFWISASAQSFGDTAT
EEECCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHEEECCCHHCCCHHH
DLNRLSNRCFTQRLCIGIYREEFNTFNTLAHHVFNSITAAAADADDFNHRVIGKFHWFKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHC
SFSPICACRLSP
CCCCEEEEECCC
>Mature Secondary Structure
MIIVLSRQITYPTEVYYTFGGPVYHKEPRNPNSSQFLISLLTYECWDIQIIRLFRSLRRI
CEEEEECCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VIHYFSDRLLLLGQRSHPMLLVAIHHWLLNLLIGHQSDFRTFVHADPCRNNGYAQLVIHI
HHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHCCCCHHCEEEECCCCCCCCEEEEEEEE
RVKRSTDNHSRVAGSKCTDGVTYRFDLNQTQVEARRDVNQHAARARQVDIFQQRRRDSHF
EEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
SSFFRTVFTARHARTHHCVAHFRHYGAYVCKVHVHQTRTSNQFGDTLHSAFQYIVRCAKR
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
IQQGDTAAQNFQQFVVRDSDQRVHMLGQFSDPLLGECHTLLAFKVERLSDDSNGQDTQIF
HHCCCHHHHHHHHHHHCCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE
CHFSDDWCCTCTGTTTHTRSNKDHVCTFQRRTQCIAILISRIAANFWISASAQSFGDTAT
EEECCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHEEECCCHHCCCHHH
DLNRLSNRCFTQRLCIGIYREEFNTFNTLAHHVFNSITAAAADADDFNHRVIGKFHWFKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHC
SFSPICACRLSP
CCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA