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The map label for this gene is AvrB3 [H]

Identifier: 79093592

GI number: 79093592

Start: 1377971

End: 1378942

Strand: Direct

Name: AvrB3 [H]

Synonym: Psyr_1219

Alternate gene names: 79093592

Gene position: 1377971-1378942 (Clockwise)

Preceding gene: 66044469

Following gene: 66044471

Centisome position: 22.61

GC content: 50.62

Gene sequence:

>972_bases
ATGGGTTGCGTATCGTCAAAAGCATCTGTCATTTCTTCGGACAGCTTTCGCGCATCATATACAAACTCTCCAGAGGCATC
CTCAGTCCATCAACGAGCCAGGACGCCAAGGTGCGGTGAGCTTCAGGGGCCCCAAGTGAGCAGATTGATGCCTTACCAGC
AGGCGTTAGTAGGTGTGGCCCGATGGCCTAATCCGCATTTTAACAGGGACGATGCGCCCCACCAGATGGAGTATGGAGAA
TCGTTCTACCATAAAAGCCGAGAGCTTGGTGCGTCGGTCGCCAATGGAGAGATAGAAACGTTTCAGGAGCTCTGGAGTGA
AGCTCGTGATTGGAGAGCTTCCAGAGCAGGCCAAGATGCTCGGCTTTTTAGTTCATCGCGTGATCCCAACTCTTCACGGG
CGTTTGTTACGCCTATAACTGGACCATACGAATTTTTAAAAGATAGATTCGCAAACCGTAAAGATGGAGAAAAGCATAAG
ATGCTGGATTTTCTCCCACACAGCAATACGTTTAGGTTTCATGGGAAAATTGACGGTGAGCGACTTCCTCTCACCTGGAT
CTCGATAAGTTCTGATCGTCGTGCCGACAGAACAAAGGATCCTTACCAAAGGTTGCGCGACCAAGGCATGAACGATGTGG
GTGAGCCTAATGTGATGTTGCACACCCAAGCCGAGTATGTGCCCAAAATTATGCAACATGTGGAGCATCTTTATAAGGCC
GCTACGGATGCTGCATTGTCCGATGCCAATGCGCTGAAAAAACTCGCAGAGATACATTGGTGGACGGTACAAGCTGTTCC
CGACTTTCGTGGAAGTGCAGCTAAGGCTGAGCTCTGCGTGCGCTCCATTGCCCAGGCAAGGGGCATGGACCTGCCGCCGA
TGAGACTCGGCATCGTGCCGGATCTGGAAGCGCTTACGATGCCTTTGAAAGACTTTGTGAAAAGTTACGAAGGGTTCTTC
GAACATAACTGA

Upstream 100 bases:

>100_bases
AAGCGTTAGCGCTAGACGCTAAAAAATCGAGGCTATTTGACAAATATCGGACTTTTGTCAGGCCTGACATTCAATTAAAT
AGTTAAAAAAGGTGAGCCCG

Downstream 100 bases:

>100_bases
TCGTTGCAGCGTTACTGGCGTTTGAACGCTGCCAGTAACGTACTGCGCTGCTTTTAATGAGACGGGCCAACGTTCCATTT
GTGTGGAACGTTGGCAGTGA

Product: type III effector protein AvrB3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MGCVSSKASVISSDSFRASYTNSPEASSVHQRARTPRCGELQGPQVSRLMPYQQALVGVARWPNPHFNRDDAPHQMEYGE
SFYHKSRELGASVANGEIETFQELWSEARDWRASRAGQDARLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHK
MLDFLPHSNTFRFHGKIDGERLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHLYKA
ATDAALSDANALKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLGIVPDLEALTMPLKDFVKSYEGFF
EHN

Sequences:

>Translated_323_residues
MGCVSSKASVISSDSFRASYTNSPEASSVHQRARTPRCGELQGPQVSRLMPYQQALVGVARWPNPHFNRDDAPHQMEYGE
SFYHKSRELGASVANGEIETFQELWSEARDWRASRAGQDARLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHK
MLDFLPHSNTFRFHGKIDGERLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHLYKA
ATDAALSDANALKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLGIVPDLEALTMPLKDFVKSYEGFF
EHN
>Mature_322_residues
GCVSSKASVISSDSFRASYTNSPEASSVHQRARTPRCGELQGPQVSRLMPYQQALVGVARWPNPHFNRDDAPHQMEYGES
FYHKSRELGASVANGEIETFQELWSEARDWRASRAGQDARLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHKM
LDFLPHSNTFRFHGKIDGERLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHLYKAA
TDAALSDANALKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLGIVPDLEALTMPLKDFVKSYEGFFE
HN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To avirulence B protein of the same strain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008798 [H]

Pfam domain/function: PF05394 AvrB_AvrC [H]

EC number: NA

Molecular weight: Translated: 36597; Mature: 36466

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCVSSKASVISSDSFRASYTNSPEASSVHQRARTPRCGELQGPQVSRLMPYQQALVGVA
CCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHHH
RWPNPHFNRDDAPHQMEYGESFYHKSRELGASVANGEIETFQELWSEARDWRASRAGQDA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
RLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHKMLDFLPHSNTFRFHGKIDGE
HHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCCC
RLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHLYKA
CCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHH
ATDAALSDANALKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLGIVP
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCC
DLEALTMPLKDFVKSYEGFFEHN
CHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GCVSSKASVISSDSFRASYTNSPEASSVHQRARTPRCGELQGPQVSRLMPYQQALVGVA
CCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHHH
RWPNPHFNRDDAPHQMEYGESFYHKSRELGASVANGEIETFQELWSEARDWRASRAGQDA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
RLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHKMLDFLPHSNTFRFHGKIDGE
HHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCCC
RLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHLYKA
CCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHH
ATDAALSDANALKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLGIVP
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCC
DLEALTMPLKDFVKSYEGFFEHN
CHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3049552 [H]