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The map label for this gene is 66044471

Identifier: 66044471

GI number: 66044471

Start: 1379091

End: 1380239

Strand: Direct

Name: 66044471

Synonym: Psyr_1220

Alternate gene names: NA

Gene position: 1379091-1380239 (Clockwise)

Preceding gene: 79093592

Following gene: 66044475

Centisome position: 22.63

GC content: 57.88

Gene sequence:

>1149_bases
ATGAGAATTCACAGTTCCGGTCATGGCATCTCCGGACCAGTATCCTCTGCAGAAACCGTTGAAAAGGCCGTGCAATCATC
GGCCCAAGCGCAGAATGAAGCGTCTCACAGCGGTCCATCAGAACATCCTGAATCCCGCTCCTGTCAGGCACGCCCGAACT
ACCCTTATTCGTCAGTCAAAACACGGTTACCCCCTGTTGCGTCTGCAGGGCAGTCGCTGTCTGAGACACCCTCTTCATTG
CCTGGCTACCTGCTGTTACGTCGGCTTGATCGTCGTCCGCTGGACCAGGACGCAATAAAGGGGCTTATTCCTGCTGATGA
AGCAGTGGGCGAAGCGCGCCGCGCGTTGCCCTTCGGCAGGGGCAACATTGATGTGGATGCGCAACGCTCCAACCTGGAAA
GCGGGGCCCGCACGCTCGCCGCAAGACGCCTGAGAAAAGACGCCGAGACGGCGGGTCATGAGCCGATGCCCGAGAACGAA
GACATGAACTGGCATGTGCTGGTTGCCATGTCGGGTCAGGTGTTCGGGGCTGGCAACTGTGGCGAACATGCCCGTATAGC
GAGCTTTGCCTACGGTGCATCGGCTCAGGAAAAAGGACGCGCTGGCGATGAAAATATTCATCTGGCTGCGCAGAGCGGGG
AAGATCATGTCTGGGCTGAAACGGATGATTCCAGCGCTGGCTCTTCGCCTATTGTCATGGACCCCTGGTCAAACGGTCCT
GCCGTTTTTGCAGAGGACAGTCGGTTTGCTAAAGATAGGCGCGCGGTAGAGCGAACGGATTCGTTCACGCTTTCAACCGC
TGCCAAAGCAGGCAAGATTACACGAGAGACAGCCGAGAAGGCGCTGACCCAAGCGACCAGCCGTTTGCAGCAACGTCTTG
CTGATCAGCAGGCGCAAGTCTCGCCGGTTGAAGGTGGTCGCTATCGGCAAGAAAACTCGGTGCTTGATGATGCGTTCGCC
CGACGAGTCAGTGACATGTTGAACAATGCCGATCCACGGCGTGCATTGCAGGTGGAAATCGAGGCGTCCGGAGTTGCAAT
GTCGCTGGGTGCCCAAGGCGTCAAGACGGTCGTCCGACAGGCGCCAAAAGTGGTCAGGCAAGCCAGAGGCGTCGCATCTG
CTAAAGGTATGTCTCCGCGAGCAACCTGA

Upstream 100 bases:

>100_bases
TGCTTTTAATGAGACGGGCCAACGTTCCATTTGTGTGGAACGTTGGCAGTGATTGGTTTGAGTAAGCTTTTCCAGGTACG
ACGAGTGCAGCGAGGTAACA

Downstream 100 bases:

>100_bases
AAACCGGTTGAGTATGCGTGGTATTCAGGGCATACGGAAAGTACGCGCGGCAGGACGCGACAGCATTTTTCATGACTTCG
TAATTGTTTAATGGTATCCG

Product: type III effector HopX1

Products: NA

Alternate protein names: Avirulence Protein; Hypothethical Protein

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MRIHSSGHGISGPVSSAETVEKAVQSSAQAQNEASHSGPSEHPESRSCQARPNYPYSSVKTRLPPVASAGQSLSETPSSL
PGYLLLRRLDRRPLDQDAIKGLIPADEAVGEARRALPFGRGNIDVDAQRSNLESGARTLAARRLRKDAETAGHEPMPENE
DMNWHVLVAMSGQVFGAGNCGEHARIASFAYGASAQEKGRAGDENIHLAAQSGEDHVWAETDDSSAGSSPIVMDPWSNGP
AVFAEDSRFAKDRRAVERTDSFTLSTAAKAGKITRETAEKALTQATSRLQQRLADQQAQVSPVEGGRYRQENSVLDDAFA
RRVSDMLNNADPRRALQVEIEASGVAMSLGAQGVKTVVRQAPKVVRQARGVASAKGMSPRAT

Sequences:

>Translated_382_residues
MRIHSSGHGISGPVSSAETVEKAVQSSAQAQNEASHSGPSEHPESRSCQARPNYPYSSVKTRLPPVASAGQSLSETPSSL
PGYLLLRRLDRRPLDQDAIKGLIPADEAVGEARRALPFGRGNIDVDAQRSNLESGARTLAARRLRKDAETAGHEPMPENE
DMNWHVLVAMSGQVFGAGNCGEHARIASFAYGASAQEKGRAGDENIHLAAQSGEDHVWAETDDSSAGSSPIVMDPWSNGP
AVFAEDSRFAKDRRAVERTDSFTLSTAAKAGKITRETAEKALTQATSRLQQRLADQQAQVSPVEGGRYRQENSVLDDAFA
RRVSDMLNNADPRRALQVEIEASGVAMSLGAQGVKTVVRQAPKVVRQARGVASAKGMSPRAT
>Mature_382_residues
MRIHSSGHGISGPVSSAETVEKAVQSSAQAQNEASHSGPSEHPESRSCQARPNYPYSSVKTRLPPVASAGQSLSETPSSL
PGYLLLRRLDRRPLDQDAIKGLIPADEAVGEARRALPFGRGNIDVDAQRSNLESGARTLAARRLRKDAETAGHEPMPENE
DMNWHVLVAMSGQVFGAGNCGEHARIASFAYGASAQEKGRAGDENIHLAAQSGEDHVWAETDDSSAGSSPIVMDPWSNGP
AVFAEDSRFAKDRRAVERTDSFTLSTAAKAGKITRETAEKALTQATSRLQQRLADQQAQVSPVEGGRYRQENSVLDDAFA
RRVSDMLNNADPRRALQVEIEASGVAMSLGAQGVKTVVRQAPKVVRQARGVASAKGMSPRAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40811; Mature: 40811

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIHSSGHGISGPVSSAETVEKAVQSSAQAQNEASHSGPSEHPESRSCQARPNYPYSSVK
CEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
TRLPPVASAGQSLSETPSSLPGYLLLRRLDRRPLDQDAIKGLIPADEAVGEARRALPFGR
HCCCCHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHCCCCC
GNIDVDAQRSNLESGARTLAARRLRKDAETAGHEPMPENEDMNWHVLVAMSGQVFGAGNC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEECCCC
GEHARIASFAYGASAQEKGRAGDENIHLAAQSGEDHVWAETDDSSAGSSPIVMDPWSNGP
CCHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCEEECCCCCCC
AVFAEDSRFAKDRRAVERTDSFTLSTAAKAGKITRETAEKALTQATSRLQQRLADQQAQV
EEEECCHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPVEGGRYRQENSVLDDAFARRVSDMLNNADPRRALQVEIEASGVAMSLGAQGVKTVVRQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEHHCHHHHHHHHHH
APKVVRQARGVASAKGMSPRAT
HHHHHHHHCCHHHHCCCCCCCC
>Mature Secondary Structure
MRIHSSGHGISGPVSSAETVEKAVQSSAQAQNEASHSGPSEHPESRSCQARPNYPYSSVK
CEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
TRLPPVASAGQSLSETPSSLPGYLLLRRLDRRPLDQDAIKGLIPADEAVGEARRALPFGR
HCCCCHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHCCCCC
GNIDVDAQRSNLESGARTLAARRLRKDAETAGHEPMPENEDMNWHVLVAMSGQVFGAGNC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEECCCC
GEHARIASFAYGASAQEKGRAGDENIHLAAQSGEDHVWAETDDSSAGSSPIVMDPWSNGP
CCHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCEEECCCCCCC
AVFAEDSRFAKDRRAVERTDSFTLSTAAKAGKITRETAEKALTQATSRLQQRLADQQAQV
EEEECCHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPVEGGRYRQENSVLDDAFARRVSDMLNNADPRRALQVEIEASGVAMSLGAQGVKTVVRQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEHHCHHHHHHHHHH
APKVVRQARGVASAKGMSPRAT
HHHHHHHHCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA