| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is 78780127
Identifier: 78780127
GI number: 78780127
Start: 1631394
End: 1632170
Strand: Reverse
Name: 78780127
Synonym: PMT9312_1742
Alternate gene names: NA
Gene position: 1632170-1631394 (Counterclockwise)
Preceding gene: 78780129
Following gene: 78780126
Centisome position: 95.49
GC content: 35.26
Gene sequence:
>777_bases ATGAGTCTGATTAATCTTTTGCCACAAAAAATTCAAGAAGAGTTGAGAAGTAAATCTTTACTCAAAGTTATTTCAGGATT GAATAATTTTGATGTTAAATCTGTGAAAACAATTGTTGAGGCTGCTTCATTAGGAGGTGCAGACTTTGTAGATATTGCTT GTAAACCTGAACTTGTTGATTTAGCACTTGCGAATTCTTCATTACCTGTTTGCGTTAGTTCAGTAGTGCCAAGATTTTTT CTGGAGTCTGTAGAAGCAGGCGCCTCATTAATTGAGATAGGGAATTACGATACTTTTTATGAAAAAGGCATTAATTTTTC AGAAGAAAAAGTCTTAAACATTACAAAAGAGACGAGAGATTTATTGCCTAATGTCCCTTTATCAGTAACTGTTCCTCATA CTATGCCTATTGATAAACAAGTCGATCTTGCTATTAAGCTTGTGGAAGAAAGAGTTGATATTATTCAAACGGAAGGTGGC ACGAGTTCTAGTCCTTATTCGTCTGGAATTAAGGGCTTTTTCGAAAAGTCAGTACCAACTCTTGCTGCTACCTATGCTAT TCATCAAGAATTTAAGAAACAAGCTTTGGAGATACCAATTATGAGTGCCTCTGGATTAAGCCAAGTAACTTGCCCACTAG CAATATCTTGCGGAGCCTCAGCAGTTGGTGTTGGATCTGCAGTTAACAAATTAGATGATTTAATCTCAATGATCGCGGTT GTTAGGGGTTTAAAAGAATCTTTGAAAAATTCAATAATTGGAGAAAAAATTTCTTAA
Upstream 100 bases:
>100_bases ATTTTTATCAGACATTTTGTGTTGCTCAGATAATATTTTTTAAAAAATGCACTGTTTTACTAAAACAATGTCACAATCAG GTAATAAATTCATTAATTAA
Downstream 100 bases:
>100_bases AATATTAATACCCTTCGGCTATTAGCTTGATGAAAAACTATAAGCTTCAAGCTCCTTACGAACCAAATGGAGATCAACCT GAAGCTATAAAAAAATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSLINLLPQKIQEELRSKSLLKVISGLNNFDVKSVKTIVEAASLGGADFVDIACKPELVDLALANSSLPVCVSSVVPRFF LESVEAGASLIEIGNYDTFYEKGINFSEEKVLNITKETRDLLPNVPLSVTVPHTMPIDKQVDLAIKLVEERVDIIQTEGG TSSSPYSSGIKGFFEKSVPTLAATYAIHQEFKKQALEIPIMSASGLSQVTCPLAISCGASAVGVGSAVNKLDDLISMIAV VRGLKESLKNSIIGEKIS
Sequences:
>Translated_258_residues MSLINLLPQKIQEELRSKSLLKVISGLNNFDVKSVKTIVEAASLGGADFVDIACKPELVDLALANSSLPVCVSSVVPRFF LESVEAGASLIEIGNYDTFYEKGINFSEEKVLNITKETRDLLPNVPLSVTVPHTMPIDKQVDLAIKLVEERVDIIQTEGG TSSSPYSSGIKGFFEKSVPTLAATYAIHQEFKKQALEIPIMSASGLSQVTCPLAISCGASAVGVGSAVNKLDDLISMIAV VRGLKESLKNSIIGEKIS >Mature_257_residues SLINLLPQKIQEELRSKSLLKVISGLNNFDVKSVKTIVEAASLGGADFVDIACKPELVDLALANSSLPVCVSSVVPRFFL ESVEAGASLIEIGNYDTFYEKGINFSEEKVLNITKETRDLLPNVPLSVTVPHTMPIDKQVDLAIKLVEERVDIIQTEGGT SSSPYSSGIKGFFEKSVPTLAATYAIHQEFKKQALEIPIMSASGLSQVTCPLAISCGASAVGVGSAVNKLDDLISMIAVV RGLKESLKNSIIGEKIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27583; Mature: 27452
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLINLLPQKIQEELRSKSLLKVISGLNNFDVKSVKTIVEAASLGGADFVDIACKPELVD CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHH LALANSSLPVCVSSVVPRFFLESVEAGASLIEIGNYDTFYEKGINFSEEKVLNITKETRD HHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHH LLPNVPLSVTVPHTMPIDKQVDLAIKLVEERVDIIQTEGGTSSSPYSSGIKGFFEKSVPT HCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHH LAATYAIHQEFKKQALEIPIMSASGLSQVTCPLAISCGASAVGVGSAVNKLDDLISMIAV HHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH VRGLKESLKNSIIGEKIS HHHHHHHHHHHHCCCCCC >Mature Secondary Structure SLINLLPQKIQEELRSKSLLKVISGLNNFDVKSVKTIVEAASLGGADFVDIACKPELVD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHH LALANSSLPVCVSSVVPRFFLESVEAGASLIEIGNYDTFYEKGINFSEEKVLNITKETRD HHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHH LLPNVPLSVTVPHTMPIDKQVDLAIKLVEERVDIIQTEGGTSSSPYSSGIKGFFEKSVPT HCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHH LAATYAIHQEFKKQALEIPIMSASGLSQVTCPLAISCGASAVGVGSAVNKLDDLISMIAV HHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH VRGLKESLKNSIIGEKIS HHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA