| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is ahcY [H]
Identifier: 78780103
GI number: 78780103
Start: 1605223
End: 1606641
Strand: Reverse
Name: ahcY [H]
Synonym: PMT9312_1718
Alternate gene names: 78780103
Gene position: 1606641-1605223 (Counterclockwise)
Preceding gene: 78780105
Following gene: 78780102
Centisome position: 94.0
GC content: 35.38
Gene sequence:
>1419_bases ATGGTTATCGCAAATTCAGTTAAAAGCTCCACAACTAATTACGTAGTTGCTGATATATCTTTATCAGATTTTGGTCGTAA AGAAATTAAAATTGCCGAAACGGAAATGCCTGGATTAATGGCACTTAGAGATAAATATCAATCTGAAAAGCCACTAAAAG GGGCAAAAATAGCTGGAAGTCTTCATATGACTATTCAGACAGCAGTCTTAATAGAAACTCTTGTTGATCTTGGTGCAGAA GTGAAATGGGCTTCATGCAATATTTTTTCAACTCAAGATCATGCTGCAGCAGCTATTGCAGATCAAGGAATTTCTGTGTA TGCAAAAAAAGGTGAGACTCTTGATGAATATTGGCAATATACCCACTGTATCCTTGATTGGGGTGCAGACTCTCCAAATA TGATTCTTGATGATGGGGGAGATGCAACTGGCTTATTGATACTTGGTAGTAAAGCAGAAAAAGATTTATCTGTTTTAGAT AATCCCGGTAATGAAGAAGAAATTGCTTTATTCAATTCTATCAAGTATAAGTTGGAAACTGATAGTGACTTCTATTCTAG AATTAAGAGTAATATCATTGGTGTCACTGAAGAAACTACAACGGGAGTTGCAAGACTTTATCAACTGCAAAAGCAAAATG CTCTACCTTTCCCTGCTATCAATGTTAATGATTCAGTAACTAAGAGCAAATTTGATAATTTATATGGTTGCCGAGAATCT CTAGTTGACAGCATAAAGCGTGCAACTGACGTGATGATTGCAGGTAAGGTCGCTTTAGTAATGGGTTTTGGAGATGTAGG TAAAGGTTCAGCCCAGTCTCTAAGAGGACTTGGTGCAATTGTAAAAGTTGCTGAAGTTGATCCAATTTGTGCTCTTCAAG CGGCAATGGAAGGTTTTAGCGTTGTTACATTAGACGATGTTGTGGAAGATATAGATATATTTGTTACAGCTACTGGGAAC TATCAGGTTATAACAAACAAAAATCTTGTCAAGATGAAAGACGAGGCCATAGTCTGTAATATCGGCCATTTCGATAATGA AATTGATGTGGCTTCATTGAAAGATTATCCATGGGAAAATATTAAGCCGCAGGTTGATCACATAACTTTACCGAGTGGTA ATAAAATAATCCTTTTAGCTGAAGGTAGATTAGTTAATTTAGGTTGTGCCACTGGACATCCAAGCTTTGTTATGAGTAAT TCGTTTACTAATCAAGTACTAGCTCAAATTGAACTTTTCAATAAGTCAGAAAAATATGCTAAGGAGGTTTATGTTTTACC AAAACATTTAGATGAAATGGTAGCTAGATTACATCTTGATAAAATTGGTGCAAAATTAACAAAATTAACTGAAGAACAGG CTGATTATATTAATGTTTCTGTTGAAGGTCCTTATAAACCAGAGCTTTATAGATACTAA
Upstream 100 bases:
>100_bases AGAGTTTTTTTCCTAAATTTAAAGTCTCTTTTAAATTCTCAATAAACACAAAATTACACAAGAATCATTTATAGTTTAGT AGAGAAAGTATTTACTAGAT
Downstream 100 bases:
>100_bases GTTTGAATTTAATTTTTATAAATTTTCTTACTTCAATCCCTGACTATATTAGTTTGGCTGTTGAAAAGAATTCAACAATT GCATACCTAACAATTTGTTT
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MVIANSVKSSTTNYVVADISLSDFGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAE VKWASCNIFSTQDHAAAAIADQGISVYAKKGETLDEYWQYTHCILDWGADSPNMILDDGGDATGLLILGSKAEKDLSVLD NPGNEEEIALFNSIKYKLETDSDFYSRIKSNIIGVTEETTTGVARLYQLQKQNALPFPAINVNDSVTKSKFDNLYGCRES LVDSIKRATDVMIAGKVALVMGFGDVGKGSAQSLRGLGAIVKVAEVDPICALQAAMEGFSVVTLDDVVEDIDIFVTATGN YQVITNKNLVKMKDEAIVCNIGHFDNEIDVASLKDYPWENIKPQVDHITLPSGNKIILLAEGRLVNLGCATGHPSFVMSN SFTNQVLAQIELFNKSEKYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTEEQADYINVSVEGPYKPELYRY
Sequences:
>Translated_472_residues MVIANSVKSSTTNYVVADISLSDFGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAE VKWASCNIFSTQDHAAAAIADQGISVYAKKGETLDEYWQYTHCILDWGADSPNMILDDGGDATGLLILGSKAEKDLSVLD NPGNEEEIALFNSIKYKLETDSDFYSRIKSNIIGVTEETTTGVARLYQLQKQNALPFPAINVNDSVTKSKFDNLYGCRES LVDSIKRATDVMIAGKVALVMGFGDVGKGSAQSLRGLGAIVKVAEVDPICALQAAMEGFSVVTLDDVVEDIDIFVTATGN YQVITNKNLVKMKDEAIVCNIGHFDNEIDVASLKDYPWENIKPQVDHITLPSGNKIILLAEGRLVNLGCATGHPSFVMSN SFTNQVLAQIELFNKSEKYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTEEQADYINVSVEGPYKPELYRY >Mature_472_residues MVIANSVKSSTTNYVVADISLSDFGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAE VKWASCNIFSTQDHAAAAIADQGISVYAKKGETLDEYWQYTHCILDWGADSPNMILDDGGDATGLLILGSKAEKDLSVLD NPGNEEEIALFNSIKYKLETDSDFYSRIKSNIIGVTEETTTGVARLYQLQKQNALPFPAINVNDSVTKSKFDNLYGCRES LVDSIKRATDVMIAGKVALVMGFGDVGKGSAQSLRGLGAIVKVAEVDPICALQAAMEGFSVVTLDDVVEDIDIFVTATGN YQVITNKNLVKMKDEAIVCNIGHFDNEIDVASLKDYPWENIKPQVDHITLPSGNKIILLAEGRLVNLGCATGHPSFVMSN SFTNQVLAQIELFNKSEKYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTEEQADYINVSVEGPYKPELYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=463, Percent_Identity=59.1792656587473, Blast_Score=514, Evalue=1e-146, Organism=Homo sapiens, GI239937451, Length=441, Percent_Identity=59.1836734693878, Blast_Score=490, Evalue=1e-138, Organism=Homo sapiens, GI195539337, Length=465, Percent_Identity=49.247311827957, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI24308043, Length=465, Percent_Identity=49.247311827957, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI298286489, Length=465, Percent_Identity=49.247311827957, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI195539349, Length=465, Percent_Identity=49.247311827957, Blast_Score=458, Evalue=1e-129, Organism=Homo sapiens, GI21361647, Length=465, Percent_Identity=48.3870967741936, Blast_Score=439, Evalue=1e-123, Organism=Caenorhabditis elegans, GI17506425, Length=473, Percent_Identity=57.9281183932347, Blast_Score=507, Evalue=1e-144, Organism=Saccharomyces cerevisiae, GI6320882, Length=484, Percent_Identity=55.5785123966942, Blast_Score=488, Evalue=1e-139, Organism=Drosophila melanogaster, GI24642172, Length=466, Percent_Identity=60.5150214592275, Blast_Score=521, Evalue=1e-148, Organism=Drosophila melanogaster, GI24656245, Length=466, Percent_Identity=49.7854077253219, Blast_Score=454, Evalue=1e-128, Organism=Drosophila melanogaster, GI45553387, Length=463, Percent_Identity=50.1079913606911, Blast_Score=437, Evalue=1e-123, Organism=Drosophila melanogaster, GI45553385, Length=462, Percent_Identity=50, Blast_Score=435, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 51709; Mature: 51709
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIANSVKSSTTNYVVADISLSDFGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGS CEECCCCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCEEECE LHMTIQTAVLIETLVDLGAEVKWASCNIFSTQDHAAAAIADQGISVYAKKGETLDEYWQY EEEHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHCCCCEEEEECCCCHHHHHHH THCILDWGADSPNMILDDGGDATGLLILGSKAEKDLSVLDNPGNEEEIALFNSIKYKLET EEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCEEEEEEEEEEEEEC DSDFYSRIKSNIIGVTEETTTGVARLYQLQKQNALPFPAINVNDSVTKSKFDNLYGCRES CHHHHHHHHHCEEECCCCHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHH LVDSIKRATDVMIAGKVALVMGFGDVGKGSAQSLRGLGAIVKVAEVDPICALQAAMEGFS HHHHHHHHHHEEEECEEEEEEECCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHCCCE VVTLDDVVEDIDIFVTATGNYQVITNKNLVKMKDEAIVCNIGHFDNEIDVASLKDYPWEN EEEHHHHHCCEEEEEEECCCEEEEECCCEEEEECCEEEEEECCCCCCCCEEECCCCCCCC IKPQVDHITLPSGNKIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSEKYA CCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCHHHH KEVYVLPKHLDEMVARLHLDKIGAKLTKLTEEQADYINVSVEGPYKPELYRY HHHEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MVIANSVKSSTTNYVVADISLSDFGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGS CEECCCCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCEEECE LHMTIQTAVLIETLVDLGAEVKWASCNIFSTQDHAAAAIADQGISVYAKKGETLDEYWQY EEEHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHCCCCEEEEECCCCHHHHHHH THCILDWGADSPNMILDDGGDATGLLILGSKAEKDLSVLDNPGNEEEIALFNSIKYKLET EEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCEEEEEEEEEEEEEC DSDFYSRIKSNIIGVTEETTTGVARLYQLQKQNALPFPAINVNDSVTKSKFDNLYGCRES CHHHHHHHHHCEEECCCCHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHH LVDSIKRATDVMIAGKVALVMGFGDVGKGSAQSLRGLGAIVKVAEVDPICALQAAMEGFS HHHHHHHHHHEEEECEEEEEEECCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHCCCE VVTLDDVVEDIDIFVTATGNYQVITNKNLVKMKDEAIVCNIGHFDNEIDVASLKDYPWEN EEEHHHHHCCEEEEEEECCCEEEEECCCEEEEECCEEEEEECCCCCCCCEEECCCCCCCC IKPQVDHITLPSGNKIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSEKYA CCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCHHHH KEVYVLPKHLDEMVARLHLDKIGAKLTKLTEEQADYINVSVEGPYKPELYRY HHHEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA