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The map label for this gene is 78779974

Identifier: 78779974

GI number: 78779974

Start: 1487571

End: 1489190

Strand: Direct

Name: 78779974

Synonym: PMT9312_1590

Alternate gene names: NA

Gene position: 1487571-1489190 (Clockwise)

Preceding gene: 78779973

Following gene: 78779977

Centisome position: 87.03

GC content: 33.83

Gene sequence:

>1620_bases
ATGAATTTTAATTTGAAGTTGAAAAAATTAAATAAAAAAAGTTACCACAGAAATCACTATGGAAAAATCCTAACTGTAAG
ATTGCCATGTAATCCGATATTTCCAATAGGACCTATTTATTTAGCAGACCATATTCATAAATGTTTTCCAAATATAGAGC
AACAATTTATTGATCTAGCAATAATTCCATCTAATAAAGTTTCCAAATATTTATCGAGAAAAATTGATCAATTTAGACCT
CATCTAATCATTTTTTCATGGAGAGATATACAAATTTATGCACCTGTTGATGGCAGAAGTGGAAATCCCCTACAAAACTC
TTTTGAGGTTTTCTACTCAAAAAATATCCTTAAAAAAATCAGGGGTTCTTGGGGAGGATTAAAATTAATTGCATCTCATT
ATGGAGAAATATATAGAAATACTGCTTTAGTCAAAATGGGTCTAAAAAGAGCACAAAAATACAACAAAGATGTAACTGTA
ATTTTAGGAGGCGGAGCAGTTAGTGTCTTCTATGAACAATTAGGCAATCTACTTCCAAAAGGAACTGTAATTTCAGTTGG
AGAGGGAGAAAATCTAATAGAGAAAATTATTAGGGGAGATTCTATAGAGGAAGAAAGATGTTATTTTGCTGGACAAAAAC
CTCGGAACAAATTAATACATGAACAACCTTCAGGCACTATTAAAACTGCCTGCAACTATAAATATATCAAATCAATATGG
CCTGAATTCAATTGGTATATAGAAGGTGGAGATTACTATGTAGGGGTGCAAACAAAAAGAGGTTGTCCTCATAATTGTTG
TTTCTGTGTTTATACAGTTGTGGAGGGGAAGCAGGTTCGCGTGAATCCTGTTAAGGAAGTGATCAAAGAAATGAAGCAAT
TGTATGATCTTGGAGTGAGGGGATTTTGGTTCACAGATGCACAGTTTATTCCAGCCAAAAAACATATTGAAGATGCAAAA
ATACTTTTGCAAGCTATTAAGGATCAAGGCTGGGAAGATATTAATTGGGCTGCATACATCAGAGCAGATAATATTGATGC
TGAGCTAGCTCAGCTTATGGTGGATACAGGTATGAGCTATTTTGAAATAGGTATCACCTCAGGATCTCAAGAACTTGTTA
GAAAAATGAGATTAGCATATGACCTTGAAACAGTATTAAATAATTGCAGAATGCTAGTCGAATCAGGTTTCAAGAACCAT
GTTTCAGTCAATTATTCATTTAATGTTTTTGATGAAACGCCAAGCACCATTAGACAAACAATTGCTTACCATAGAGAATT
AGAAAAAATTTTTGGTAAAGGCTTAGTTGATCCAGCTATATTCTTTATAGGTTTGGAACCTCACACTCTTCTTGAGAAGT
ACGCCTTAGATCATAAAATTTTGAAGCCGAATTATAATCCAATGAGTATGATGCCCTGGACAGCGAGAAAACTTCTGTGG
AATCCAGGCTCATTAGGGAAAAAACTTGGTCAGGTTTGCTTAGAAGCTTTTGATAATCAAGAAGATGAATTTGGTAAAAC
AGTTATCAACATTCTTGAGAGAGAATATGGAAAGTCATCCTTAAAAGAATCCTTAAAAGTCCGTCCCTTGTCAGAACGGA
AATTAGCTCATTCTAAATAA

Upstream 100 bases:

>100_bases
TTAAATTTTCGTTAGTATTTTCTAGGGATTTTTAATTTCTCCAAATTAGTAATAAAATAGTTAGATTCTTAAAGAAAATA
AATTCATTAAATTTCATGAC

Downstream 100 bases:

>100_bases
TAAATTCAACCGTTATTAATTAATCCTCTTTCTCAATTGAACTAGAAATTCCTTTCGATTTTAATGATTCTGAGTAGAAT
TCTGCTGGCTCTAAATCACA

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MNFNLKLKKLNKKSYHRNHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPNIEQQFIDLAIIPSNKVSKYLSRKIDQFRP
HLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKIRGSWGGLKLIASHYGEIYRNTALVKMGLKRAQKYNKDVTV
ILGGGAVSVFYEQLGNLLPKGTVISVGEGENLIEKIIRGDSIEEERCYFAGQKPRNKLIHEQPSGTIKTACNYKYIKSIW
PEFNWYIEGGDYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVIKEMKQLYDLGVRGFWFTDAQFIPAKKHIEDAK
ILLQAIKDQGWEDINWAAYIRADNIDAELAQLMVDTGMSYFEIGITSGSQELVRKMRLAYDLETVLNNCRMLVESGFKNH
VSVNYSFNVFDETPSTIRQTIAYHRELEKIFGKGLVDPAIFFIGLEPHTLLEKYALDHKILKPNYNPMSMMPWTARKLLW
NPGSLGKKLGQVCLEAFDNQEDEFGKTVINILEREYGKSSLKESLKVRPLSERKLAHSK

Sequences:

>Translated_539_residues
MNFNLKLKKLNKKSYHRNHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPNIEQQFIDLAIIPSNKVSKYLSRKIDQFRP
HLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKIRGSWGGLKLIASHYGEIYRNTALVKMGLKRAQKYNKDVTV
ILGGGAVSVFYEQLGNLLPKGTVISVGEGENLIEKIIRGDSIEEERCYFAGQKPRNKLIHEQPSGTIKTACNYKYIKSIW
PEFNWYIEGGDYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVIKEMKQLYDLGVRGFWFTDAQFIPAKKHIEDAK
ILLQAIKDQGWEDINWAAYIRADNIDAELAQLMVDTGMSYFEIGITSGSQELVRKMRLAYDLETVLNNCRMLVESGFKNH
VSVNYSFNVFDETPSTIRQTIAYHRELEKIFGKGLVDPAIFFIGLEPHTLLEKYALDHKILKPNYNPMSMMPWTARKLLW
NPGSLGKKLGQVCLEAFDNQEDEFGKTVINILEREYGKSSLKESLKVRPLSERKLAHSK
>Mature_539_residues
MNFNLKLKKLNKKSYHRNHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPNIEQQFIDLAIIPSNKVSKYLSRKIDQFRP
HLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKIRGSWGGLKLIASHYGEIYRNTALVKMGLKRAQKYNKDVTV
ILGGGAVSVFYEQLGNLLPKGTVISVGEGENLIEKIIRGDSIEEERCYFAGQKPRNKLIHEQPSGTIKTACNYKYIKSIW
PEFNWYIEGGDYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVIKEMKQLYDLGVRGFWFTDAQFIPAKKHIEDAK
ILLQAIKDQGWEDINWAAYIRADNIDAELAQLMVDTGMSYFEIGITSGSQELVRKMRLAYDLETVLNNCRMLVESGFKNH
VSVNYSFNVFDETPSTIRQTIAYHRELEKIFGKGLVDPAIFFIGLEPHTLLEKYALDHKILKPNYNPMSMMPWTARKLLW
NPGSLGKKLGQVCLEAFDNQEDEFGKTVINILEREYGKSSLKESLKVRPLSERKLAHSK

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 61911; Mature: 61911

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFNLKLKKLNKKSYHRNHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPNIEQQFIDLA
CCCCEEEEECCCHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHEEEE
IIPSNKVSKYLSRKIDQFRPHLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKI
EECCHHHHHHHHHHHHHCCCCEEEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
RGSWGGLKLIASHYGEIYRNTALVKMGLKRAQKYNKDVTVILGGGAVSVFYEQLGNLLPK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCC
GTVISVGEGENLIEKIIRGDSIEEERCYFAGQKPRNKLIHEQPSGTIKTACNYKYIKSIW
CCEEEECCCHHHHHHHHCCCCCCCCHHHCCCCCCHHCCCCCCCCCCEEECCCHHHHHHHC
PEFNWYIEGGDYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVIKEMKQLYDLGVR
CCCEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCC
GFWFTDAQFIPAKKHIEDAKILLQAIKDQGWEDINWAAYIRADNIDAELAQLMVDTGMSY
EEEECCCEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCE
FEIGITSGSQELVRKMRLAYDLETVLNNCRMLVESGFKNHVSVNYSFNVFDETPSTIRQT
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHH
IAYHRELEKIFGKGLVDPAIFFIGLEPHTLLEKYALDHKILKPNYNPMSMMPWTARKLLW
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHC
NPGSLGKKLGQVCLEAFDNQEDEFGKTVINILEREYGKSSLKESLKVRPLSERKLAHSK
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MNFNLKLKKLNKKSYHRNHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPNIEQQFIDLA
CCCCEEEEECCCHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHEEEE
IIPSNKVSKYLSRKIDQFRPHLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKI
EECCHHHHHHHHHHHHHCCCCEEEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
RGSWGGLKLIASHYGEIYRNTALVKMGLKRAQKYNKDVTVILGGGAVSVFYEQLGNLLPK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCC
GTVISVGEGENLIEKIIRGDSIEEERCYFAGQKPRNKLIHEQPSGTIKTACNYKYIKSIW
CCEEEECCCHHHHHHHHCCCCCCCCHHHCCCCCCHHCCCCCCCCCCEEECCCHHHHHHHC
PEFNWYIEGGDYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVIKEMKQLYDLGVR
CCCEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCC
GFWFTDAQFIPAKKHIEDAKILLQAIKDQGWEDINWAAYIRADNIDAELAQLMVDTGMSY
EEEECCCEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCE
FEIGITSGSQELVRKMRLAYDLETVLNNCRMLVESGFKNHVSVNYSFNVFDETPSTIRQT
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHH
IAYHRELEKIFGKGLVDPAIFFIGLEPHTLLEKYALDHKILKPNYNPMSMMPWTARKLLW
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHC
NPGSLGKKLGQVCLEAFDNQEDEFGKTVINILEREYGKSSLKESLKVRPLSERKLAHSK
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]