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The map label for this gene is 78779957

Identifier: 78779957

GI number: 78779957

Start: 1463802

End: 1464569

Strand: Reverse

Name: 78779957

Synonym: PMT9312_1573

Alternate gene names: NA

Gene position: 1464569-1463802 (Counterclockwise)

Preceding gene: 78779958

Following gene: 78779956

Centisome position: 85.69

GC content: 35.03

Gene sequence:

>768_bases
ATGACAAAAAATAAGGATCCTAAAAAAGAAAGTCTAGCTGAAATTGCAGTTGATCCAGATGTTTTAGCGAGAGAATTGGC
TTTAGAGATTGAAATAGATCCTTTAGAGCAAATTGATGAAGATGCTTTTTCAAAAGGTTTCAATATAACTCAAGAGTGCA
ATGAAGCTTTAAAAATGCTTGAAGGTAACAGAGAAGAAAGAATACAGGGGTTAAGAATATTTTGTGAATATAGAGATAAA
AGATCTTTTCCCCTTTTGTTACCATTACTTGATCAACCTTGCCCTGTTGAAAGAATGAGTGCGGTATATGCTTTAGGTCG
TAATCCATGTCCTAGCGCAGTAAAGAAACTTGTCAGCCTTTTGGAGACTGATGATAATGCTTATGTTAGGAGGGCGACTG
CATGGAGCTTAGCTAATTATGATGACCAAATTGTTTTACAGCCATTAATTAGTGCTTTAAAGAACGATGTAGCTGCAGTA
AGGTTATGGTCATCTAGTTCTTTAGCTGAAATTGGAAATGTTTCTCTGGAAAACGCTCAATTAGCAGCAGAACAGCTTTT
AATAAGTTTAAAGATAGATAATGAATCAGGTGTAAGAAGTAATTGCATTTGGTCATTGTGTAGGTTGTACGAAAAATTAA
ACAATACATTTCAAGAAAGTTTCGTTGATGAATGTACCAAGATAGCCCTTTTCGATAAAGAGCCATCCGTTATGGAAGAA
GCAAAAACTGCCTTGGATTCAATGGGGATGCAAGGTTTTTATAATTAA

Upstream 100 bases:

>100_bases
ACTTTTTGGGATTGCTTTCTTTGCAGTTAGTGCAAGAATTTGGTTGCCAGGAGATATGATGTCGCCTGCTCCCATAAATT
AATATTTTTAGTTTTTGAAA

Downstream 100 bases:

>100_bases
ATTTCTTAATTTATTTTTCGTAGAATGTAGCTCAAAATAAATATATCAGATATTCAATATAAAAATTAAAAATTAATTAA
CTTGTACCAACTGAAACAAA

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTKNKDPKKESLAEIAVDPDVLARELALEIEIDPLEQIDEDAFSKGFNITQECNEALKMLEGNREERIQGLRIFCEYRDK
RSFPLLLPLLDQPCPVERMSAVYALGRNPCPSAVKKLVSLLETDDNAYVRRATAWSLANYDDQIVLQPLISALKNDVAAV
RLWSSSSLAEIGNVSLENAQLAAEQLLISLKIDNESGVRSNCIWSLCRLYEKLNNTFQESFVDECTKIALFDKEPSVMEE
AKTALDSMGMQGFYN

Sequences:

>Translated_255_residues
MTKNKDPKKESLAEIAVDPDVLARELALEIEIDPLEQIDEDAFSKGFNITQECNEALKMLEGNREERIQGLRIFCEYRDK
RSFPLLLPLLDQPCPVERMSAVYALGRNPCPSAVKKLVSLLETDDNAYVRRATAWSLANYDDQIVLQPLISALKNDVAAV
RLWSSSSLAEIGNVSLENAQLAAEQLLISLKIDNESGVRSNCIWSLCRLYEKLNNTFQESFVDECTKIALFDKEPSVMEE
AKTALDSMGMQGFYN
>Mature_254_residues
TKNKDPKKESLAEIAVDPDVLARELALEIEIDPLEQIDEDAFSKGFNITQECNEALKMLEGNREERIQGLRIFCEYRDKR
SFPLLLPLLDQPCPVERMSAVYALGRNPCPSAVKKLVSLLETDDNAYVRRATAWSLANYDDQIVLQPLISALKNDVAAVR
LWSSSSLAEIGNVSLENAQLAAEQLLISLKIDNESGVRSNCIWSLCRLYEKLNNTFQESFVDECTKIALFDKEPSVMEEA
KTALDSMGMQGFYN

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28688; Mature: 28557

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNKDPKKESLAEIAVDPDVLARELALEIEIDPLEQIDEDAFSKGFNITQECNEALKML
CCCCCCCCHHHHHHHHCCHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
EGNREERIQGLRIFCEYRDKRSFPLLLPLLDQPCPVERMSAVYALGRNPCPSAVKKLVSL
HCCHHHHHHHHHHHHHHCCCCCCCEEHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
LETDDNAYVRRATAWSLANYDDQIVLQPLISALKNDVAAVRLWSSSSLAEIGNVSLENAQ
HHCCCCHHEEHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEEEECCCCHHHHCCCCHHHHH
LAAEQLLISLKIDNESGVRSNCIWSLCRLYEKLNNTFQESFVDECTKIALFDKEPSVMEE
HHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH
AKTALDSMGMQGFYN
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKNKDPKKESLAEIAVDPDVLARELALEIEIDPLEQIDEDAFSKGFNITQECNEALKML
CCCCCCCHHHHHHHHCCHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
EGNREERIQGLRIFCEYRDKRSFPLLLPLLDQPCPVERMSAVYALGRNPCPSAVKKLVSL
HCCHHHHHHHHHHHHHHCCCCCCCEEHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
LETDDNAYVRRATAWSLANYDDQIVLQPLISALKNDVAAVRLWSSSSLAEIGNVSLENAQ
HHCCCCHHEEHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEEEECCCCHHHHCCCCHHHHH
LAAEQLLISLKIDNESGVRSNCIWSLCRLYEKLNNTFQESFVDECTKIALFDKEPSVMEE
HHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH
AKTALDSMGMQGFYN
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA