| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is arnT [H]
Identifier: 78779694
GI number: 78779694
Start: 1220026
End: 1221573
Strand: Direct
Name: arnT [H]
Synonym: PMT9312_1311
Alternate gene names: 78779694
Gene position: 1220026-1221573 (Clockwise)
Preceding gene: 78779693
Following gene: 78779695
Centisome position: 71.38
GC content: 24.68
Gene sequence:
>1548_bases TTGAATATAGAAAATACAAAGAGCAAACTTAAATATTTACTTTTTCTTCCATTACTTATTTATTTTGGGAAAAGAAGCCT TATTGCCTATGATGAAGGATTTTACGCTTTGCAAGCAAGATGGATAATTGAAAAATCTAATTGGATTGGTCCAATGTGGT GGGATGAAGTGACTTCAGATAGGACAATTGGAATTCAGTTTTTAATTGCCATATCAAAGAAATTATTTGGAGATTCAATA TTTGTAATTTACATCCCAATTATTTTTGCTGCTATTTTAATGATTTATTGTACTTATCAATTACATAAAGAATTAATAAA AGATAAAAATCCAATTTATTCAGCATTTATTTTATCCACAACATTTCTATGGATAAATTATGCACATATGGCTACTCAAG ATATCGTTTTTTCATCATTAGTATCATTAGGCTTAGTATCTACAATAAAAGCCTATAAAACTAATAATAAAAATCAAATA TTAATCTCAGGATCTTGGATAGGTCTCGCATTTATGATGAAGACATATTTAACAGCTATACCTTTATTAGGACTATTTCC TTTTTTAATTAGATCAAAATTAATTTATAAAAGGAATTTCTGGGTCGGTACTATTTTGGGATTCATGCCTTTTTTGTTAT GGAGTTATAAATACATCCTTTTATACAGCTTTTCAACTTATAGTGGTCTTTTTGAAAAATTAATTTTTCTCTCTAAGAAT AATCATTTTACTAATCCTTTCTATTATTATTTATGGAACTTATCAATTAATATTTTTCCATGGACAATTCCTTCTTTTGT TGGGTTATTTAAAGCATCAAGAGTTAATATAATTTCAAGGTATTTTTTATTCTATTACCCGATTTTTATTTTAGTCTTAC TTAGTTTATTCTCTACTAAAACACCTTATTATCCTATACAGATTCTATCCTTAATATCTATAAATACATATATTGGAATT AAATGCTTTATTGAAAATAATAATAAAAATATTATCTTTTATCTTGAGAAAATCAACTTCCTTATTATTCCTATATTAAC TATTGCATTTATCCTAATTATAAATTTTTCAGAAATAATATCTCTAGATAATAGAACTAAACCTTTTATTTTTATAGGAG CAGGGTTATTTAGTTTGATATGGATAACATATAATCTCCTCAAAAATAAAAAAAGAAAATTAAATTTCGCAATTATAGGA CCTTATCTTTTGATTTTATTTCTAGTACAATCTGGTCTCATAACAGATAAATCAAAAGAATTAAGAATTGCAATTGAAAA TTTAGTTAAAAATGAAAACCTATCAAACATATCAATTGAAATCATAAAACCTGAATTTAATGATGATGAAGTATTATCCA AAATAATAAAAATAATGGTTAAAACACCCAAGATTGGGAAAAGAAGATTAGATAATTTAAGTGTATTGAGCGGGGACAGT TATGCTTGGACAACAAAAGATTTTAATAAAAATATTAAACTAAAAAAATACCAAATTGTAAATGAAGACAAAGTATTCTA TCCCTGGAAATTAATTTATAAGAAATGA
Upstream 100 bases:
>100_bases TAGAAGAATCGCAAAGATAATTTTATAGATTTAATAATAAGAAAAGAATTAAGAAAATTGCCAATAATCATATAATCTTT TATAAAGAAGATTTTCCAAA
Downstream 100 bases:
>100_bases TTCCATTTTTAAAAAATCTGAAAGATAAAATTAAGAAATTCGTTTTTAAAAGTAAACCTTTTTTGAAAAAAATTATTATG AGTAATATCTTGTTGATAAG
Product: dolichyl-phosphate-mannose-protein mannosyltransferase
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MNIENTKSKLKYLLFLPLLIYFGKRSLIAYDEGFYALQARWIIEKSNWIGPMWWDEVTSDRTIGIQFLIAISKKLFGDSI FVIYIPIIFAAILMIYCTYQLHKELIKDKNPIYSAFILSTTFLWINYAHMATQDIVFSSLVSLGLVSTIKAYKTNNKNQI LISGSWIGLAFMMKTYLTAIPLLGLFPFLIRSKLIYKRNFWVGTILGFMPFLLWSYKYILLYSFSTYSGLFEKLIFLSKN NHFTNPFYYYLWNLSINIFPWTIPSFVGLFKASRVNIISRYFLFYYPIFILVLLSLFSTKTPYYPIQILSLISINTYIGI KCFIENNNKNIIFYLEKINFLIIPILTIAFILIINFSEIISLDNRTKPFIFIGAGLFSLIWITYNLLKNKKRKLNFAIIG PYLLILFLVQSGLITDKSKELRIAIENLVKNENLSNISIEIIKPEFNDDEVLSKIIKIMVKTPKIGKRRLDNLSVLSGDS YAWTTKDFNKNIKLKKYQIVNEDKVFYPWKLIYKK
Sequences:
>Translated_515_residues MNIENTKSKLKYLLFLPLLIYFGKRSLIAYDEGFYALQARWIIEKSNWIGPMWWDEVTSDRTIGIQFLIAISKKLFGDSI FVIYIPIIFAAILMIYCTYQLHKELIKDKNPIYSAFILSTTFLWINYAHMATQDIVFSSLVSLGLVSTIKAYKTNNKNQI LISGSWIGLAFMMKTYLTAIPLLGLFPFLIRSKLIYKRNFWVGTILGFMPFLLWSYKYILLYSFSTYSGLFEKLIFLSKN NHFTNPFYYYLWNLSINIFPWTIPSFVGLFKASRVNIISRYFLFYYPIFILVLLSLFSTKTPYYPIQILSLISINTYIGI KCFIENNNKNIIFYLEKINFLIIPILTIAFILIINFSEIISLDNRTKPFIFIGAGLFSLIWITYNLLKNKKRKLNFAIIG PYLLILFLVQSGLITDKSKELRIAIENLVKNENLSNISIEIIKPEFNDDEVLSKIIKIMVKTPKIGKRRLDNLSVLSGDS YAWTTKDFNKNIKLKKYQIVNEDKVFYPWKLIYKK >Mature_515_residues MNIENTKSKLKYLLFLPLLIYFGKRSLIAYDEGFYALQARWIIEKSNWIGPMWWDEVTSDRTIGIQFLIAISKKLFGDSI FVIYIPIIFAAILMIYCTYQLHKELIKDKNPIYSAFILSTTFLWINYAHMATQDIVFSSLVSLGLVSTIKAYKTNNKNQI LISGSWIGLAFMMKTYLTAIPLLGLFPFLIRSKLIYKRNFWVGTILGFMPFLLWSYKYILLYSFSTYSGLFEKLIFLSKN NHFTNPFYYYLWNLSINIFPWTIPSFVGLFKASRVNIISRYFLFYYPIFILVLLSLFSTKTPYYPIQILSLISINTYIGI KCFIENNNKNIIFYLEKINFLIIPILTIAFILIINFSEIISLDNRTKPFIFIGAGLFSLIWITYNLLKNKKRKLNFAIIG PYLLILFLVQSGLITDKSKELRIAIENLVKNENLSNISIEIIKPEFNDDEVLSKIIKIMVKTPKIGKRRLDNLSVLSGDS YAWTTKDFNKNIKLKKYQIVNEDKVFYPWKLIYKK
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 60367; Mature: 60367
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS00636 DNAJ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIENTKSKLKYLLFLPLLIYFGKRSLIAYDEGFYALQARWIIEKSNWIGPMWWDEVTSD CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEEECCCCCCCCCHHHCCCC RTIGIQFLIAISKKLFGDSIFVIYIPIIFAAILMIYCTYQLHKELIKDKNPIYSAFILST CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH TFLWINYAHMATQDIVFSSLVSLGLVSTIKAYKTNNKNQILISGSWIGLAFMMKTYLTAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH PLLGLFPFLIRSKLIYKRNFWVGTILGFMPFLLWSYKYILLYSFSTYSGLFEKLIFLSKN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEHEEEECHHHHHHHHHHHHEECC NHFTNPFYYYLWNLSINIFPWTIPSFVGLFKASRVNIISRYFLFYYPIFILVLLSLFSTK CCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TPYYPIQILSLISINTYIGIKCFIENNNKNIIFYLEKINFLIIPILTIAFILIINFSEII CCCCHHHHHHHHHCCEEEEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHCHHHHH SLDNRTKPFIFIGAGLFSLIWITYNLLKNKKRKLNFAIIGPYLLILFLVQSGLITDKSKE CCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCH LRIAIENLVKNENLSNISIEIIKPEFNDDEVLSKIIKIMVKTPKIGKRRLDNLSVLSGDS HHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCC YAWTTKDFNKNIKLKKYQIVNEDKVFYPWKLIYKK EEEEECCCCCCCEEEEEEEECCCCEEECEEEEECC >Mature Secondary Structure MNIENTKSKLKYLLFLPLLIYFGKRSLIAYDEGFYALQARWIIEKSNWIGPMWWDEVTSD CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEEECCCCCCCCCHHHCCCC RTIGIQFLIAISKKLFGDSIFVIYIPIIFAAILMIYCTYQLHKELIKDKNPIYSAFILST CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH TFLWINYAHMATQDIVFSSLVSLGLVSTIKAYKTNNKNQILISGSWIGLAFMMKTYLTAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH PLLGLFPFLIRSKLIYKRNFWVGTILGFMPFLLWSYKYILLYSFSTYSGLFEKLIFLSKN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEHEEEECHHHHHHHHHHHHEECC NHFTNPFYYYLWNLSINIFPWTIPSFVGLFKASRVNIISRYFLFYYPIFILVLLSLFSTK CCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TPYYPIQILSLISINTYIGIKCFIENNNKNIIFYLEKINFLIIPILTIAFILIINFSEII CCCCHHHHHHHHHCCEEEEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHCHHHHH SLDNRTKPFIFIGAGLFSLIWITYNLLKNKKRKLNFAIIGPYLLILFLVQSGLITDKSKE CCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCH LRIAIENLVKNENLSNISIEIIKPEFNDDEVLSKIIKIMVKTPKIGKRRLDNLSVLSGDS HHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCC YAWTTKDFNKNIKLKKYQIVNEDKVFYPWKLIYKK EEEEECCCCCCCEEEEEEEECCCCEEECEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA