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The map label for this gene is amsG [H]

Identifier: 78779688

GI number: 78779688

Start: 1212681

End: 1213412

Strand: Direct

Name: amsG [H]

Synonym: PMT9312_1305

Alternate gene names: 78779688

Gene position: 1212681-1213412 (Clockwise)

Preceding gene: 78779687

Following gene: 78779689

Centisome position: 70.95

GC content: 27.73

Gene sequence:

>732_bases
ATGAAAAGGGTTTTCGATCTCATATTTTCATTTTTAGGCCTTATTCTCCTCTTTCCGATAATCATAATTGCTTGTTTTGG
TATTTATTTACAGGATCAACATACACCATTTTACATTGCAAAAAGAACTGGCAAAAATAATAAAAACTTTAATATGATAA
AACTTAGATCAATGATAGTAAATGCTGAGAAAAATAAAGTAGATAGTACATCGAGTAATGATCCTAGAATAACTAAAATA
GGTAGGTTTATAAGAAAGTTAAAATTGGATGAACTTTCTCAACTCTTTAATGTTTTTATTGGGGAAATGAGCTTAGTAGG
TCCTAGACCAAATGTTAAAAGAGAGACTGATCTATATACGAAAGTTGAAAAAAATCTTTTAAGAGTTAAACCTGGCATTA
CTGATTTTGCCTCAATTATCTTTTCAGATGAATCGGAAATTTTGAAAAATGTTGATGATCCTGATATTTCTTATAACCAA
CTTATTAGACCATGGAAAAGTAGATTAGGTCTTTTTTATATAAAAAAACAATCAATACAGCTAGATATTTTGATTATTAT
TTTTACAATTTTAAGTTTTTTCTCAAGAGAATTTTCTCTTATCTTAATTAATAAAACTCTGTTAAAACTTGATGCTCCAA
AAGATTTATGTAAGTTATCACTTAGAAAAGATAAACTTAAACCTACACCTCCTCCAGGTTCTAATGAAATCGTTGTTACA
AGAGAAACCTGA

Upstream 100 bases:

>100_bases
AAGCATTTTTTAAAGAATGTATAATGATTCCAATGAACATGTTTATTACTAACGAAGATATAGATTATATATGTCAAAAA
ATTATTGAATTTTATCGAAA

Downstream 100 bases:

>100_bases
ATAATTAATGGAATTTTTAAAGAAAATTATAAAAAGACTTAGGTTAGATTCTTTACTTATTCCTAGTATTGATTTTCTTT
TAATATATTTTGCTTGCCAA

Product: lipopolysaccharide synthesis sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKRVFDLIFSFLGLILLFPIIIIACFGIYLQDQHTPFYIAKRTGKNNKNFNMIKLRSMIVNAEKNKVDSTSSNDPRITKI
GRFIRKLKLDELSQLFNVFIGEMSLVGPRPNVKRETDLYTKVEKNLLRVKPGITDFASIIFSDESEILKNVDDPDISYNQ
LIRPWKSRLGLFYIKKQSIQLDILIIIFTILSFFSREFSLILINKTLLKLDAPKDLCKLSLRKDKLKPTPPPGSNEIVVT
RET

Sequences:

>Translated_243_residues
MKRVFDLIFSFLGLILLFPIIIIACFGIYLQDQHTPFYIAKRTGKNNKNFNMIKLRSMIVNAEKNKVDSTSSNDPRITKI
GRFIRKLKLDELSQLFNVFIGEMSLVGPRPNVKRETDLYTKVEKNLLRVKPGITDFASIIFSDESEILKNVDDPDISYNQ
LIRPWKSRLGLFYIKKQSIQLDILIIIFTILSFFSREFSLILINKTLLKLDAPKDLCKLSLRKDKLKPTPPPGSNEIVVT
RET
>Mature_243_residues
MKRVFDLIFSFLGLILLFPIIIIACFGIYLQDQHTPFYIAKRTGKNNKNFNMIKLRSMIVNAEKNKVDSTSSNDPRITKI
GRFIRKLKLDELSQLFNVFIGEMSLVGPRPNVKRETDLYTKVEKNLLRVKPGITDFASIIFSDESEILKNVDDPDISYNQ
LIRPWKSRLGLFYIKKQSIQLDILIIIFTILSFFSREFSLILINKTLLKLDAPKDLCKLSLRKDKLKPTPPPGSNEIVVT
RET

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor. May act as a sugar transferase and may be involved in the export of the repeating unit by flipping the lipid carrier to the periplasmic face of the inner membrane [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=198, Percent_Identity=32.3232323232323, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 28071; Mature: 28071

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVFDLIFSFLGLILLFPIIIIACFGIYLQDQHTPFYIAKRTGKNNKNFNMIKLRSMIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCHHEEHHHHHH
NAEKNKVDSTSSNDPRITKIGRFIRKLKLDELSQLFNVFIGEMSLVGPRPNVKRETDLYT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
KVEKNLLRVKPGITDFASIIFSDESEILKNVDDPDISYNQLIRPWKSRLGLFYIKKQSIQ
HHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCC
LDILIIIFTILSFFSREFSLILINKTLLKLDAPKDLCKLSLRKDKLKPTPPPGSNEIVVT
HHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEE
RET
ECC
>Mature Secondary Structure
MKRVFDLIFSFLGLILLFPIIIIACFGIYLQDQHTPFYIAKRTGKNNKNFNMIKLRSMIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCHHEEHHHHHH
NAEKNKVDSTSSNDPRITKIGRFIRKLKLDELSQLFNVFIGEMSLVGPRPNVKRETDLYT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
KVEKNLLRVKPGITDFASIIFSDESEILKNVDDPDISYNQLIRPWKSRLGLFYIKKQSIQ
HHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCC
LDILIIIFTILSFFSREFSLILINKTLLKLDAPKDLCKLSLRKDKLKPTPPPGSNEIVVT
HHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEE
RET
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]