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The map label for this gene is rsmI [H]

Identifier: 78779677

GI number: 78779677

Start: 1201422

End: 1202285

Strand: Direct

Name: rsmI [H]

Synonym: PMT9312_1294

Alternate gene names: 78779677

Gene position: 1201422-1202285 (Clockwise)

Preceding gene: 78779675

Following gene: 78779678

Centisome position: 70.29

GC content: 29.98

Gene sequence:

>864_bases
ATGCAAAATATTTCCCTATTATCTCATAGAAAAGAAGAACCTGAGGAAGGAATTTTATATTTAGTTGGTACGCCAATTGG
GAATTTAAATGATATCTCCCCTAGAGCAATTAATATTCTTGCTAATGTCTCTTTAATTGCTTGCGAAGACACGAGACAAA
CCAGAAAAATAATGAATAAATTTAGTATTTCTAATAATTTAGTAAGCTTTAATAAGGAAAATTCTTTAAAAAGAATTCCT
AAGTTAATTAACGATCTAAAAGCAGGCAAGTCAATTGCGCTTGTAAGTGATGCGGGAATGCCAGGAATTTGTGATCCCGG
AGAAAAGATAGTTAGTCAAGCCAAATCTCAAGGATATGATGTTATTTGTATCCCAGGTGCTTGTGCCGCAATAACAGCTC
TCGTATCAAGTGGAATGCCATCTTCTAAATTTATATTCGAAGGTTTTCTTCCTAAAAAAAAAGTTGATAGAGACAAAATT
CTTTTTGAAATTAGTAAGAATGAGAAAACAACAATAGTTTATGAATCACCCCATCGTCTTAAGAAATTGTTGAGAGAATT
ATTAGATTTCTGTGGGGGTGAAAGAGAAATTGTTGTAGCAAGAGAATTAACTAAAAAATTTGAAGAACATGTGGGCAATA
ATATTGATAGTACAATAGAATTTTTTAAAGATAAAGAAGTGATTGGGGAAATAACAATAGTAATAAAAGGTATTCAAAAA
GAGAAAAATGAAGAAATTAATAAGTCAGATTTAAAAAAGGATCTTAATGAATTAACTAATGCAGGTTTAAGTTTAACCGC
GGCTTCAAAGTATTTAGCAAAAAAATATGGCATCAAAAAAAGCATAATTTATAATTTAAATTAG

Upstream 100 bases:

>100_bases
TGGCATAGTACAACAAGATATCTGCAGCTTCCCAACTCAAACTCTTCAGATTATCTATTAGATTATTAATTTCTACTCCG
AAAGGTAATTTAATCACTTA

Downstream 100 bases:

>100_bases
AGTTTAAAAAAGTTAAATTTATGTCAGTTATATTAAAAAAAATAGTTTTTGCAACTACTTTCAATTCTTGTTTATTCCTA
TTATTGATGATTGGGATACA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MQNISLLSHRKEEPEEGILYLVGTPIGNLNDISPRAINILANVSLIACEDTRQTRKIMNKFSISNNLVSFNKENSLKRIP
KLINDLKAGKSIALVSDAGMPGICDPGEKIVSQAKSQGYDVICIPGACAAITALVSSGMPSSKFIFEGFLPKKKVDRDKI
LFEISKNEKTTIVYESPHRLKKLLRELLDFCGGEREIVVARELTKKFEEHVGNNIDSTIEFFKDKEVIGEITIVIKGIQK
EKNEEINKSDLKKDLNELTNAGLSLTAASKYLAKKYGIKKSIIYNLN

Sequences:

>Translated_287_residues
MQNISLLSHRKEEPEEGILYLVGTPIGNLNDISPRAINILANVSLIACEDTRQTRKIMNKFSISNNLVSFNKENSLKRIP
KLINDLKAGKSIALVSDAGMPGICDPGEKIVSQAKSQGYDVICIPGACAAITALVSSGMPSSKFIFEGFLPKKKVDRDKI
LFEISKNEKTTIVYESPHRLKKLLRELLDFCGGEREIVVARELTKKFEEHVGNNIDSTIEFFKDKEVIGEITIVIKGIQK
EKNEEINKSDLKKDLNELTNAGLSLTAASKYLAKKYGIKKSIIYNLN
>Mature_287_residues
MQNISLLSHRKEEPEEGILYLVGTPIGNLNDISPRAINILANVSLIACEDTRQTRKIMNKFSISNNLVSFNKENSLKRIP
KLINDLKAGKSIALVSDAGMPGICDPGEKIVSQAKSQGYDVICIPGACAAITALVSSGMPSSKFIFEGFLPKKKVDRDKI
LFEISKNEKTTIVYESPHRLKKLLRELLDFCGGEREIVVARELTKKFEEHVGNNIDSTIEFFKDKEVIGEITIVIKGIQK
EKNEEINKSDLKKDLNELTNAGLSLTAASKYLAKKYGIKKSIIYNLN

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=279, Percent_Identity=38.7096774193548, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31899; Mature: 31899

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNISLLSHRKEEPEEGILYLVGTPIGNLNDISPRAINILANVSLIACEDTRQTRKIMNK
CCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHEECCEEEEECCHHHHHHHHHH
FSISNNLVSFNKENSLKRIPKLINDLKAGKSIALVSDAGMPGICDPGEKIVSQAKSQGYD
HHHCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCE
VICIPGACAAITALVSSGMPSSKFIFEGFLPKKKVDRDKILFEISKNEKTTIVYESPHRL
EEEECCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCHHHH
KKLLRELLDFCGGEREIVVARELTKKFEEHVGNNIDSTIEFFKDKEVIGEITIVIKGIQK
HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECHHH
EKNEEINKSDLKKDLNELTNAGLSLTAASKYLAKKYGIKKSIIYNLN
HCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHEEEECC
>Mature Secondary Structure
MQNISLLSHRKEEPEEGILYLVGTPIGNLNDISPRAINILANVSLIACEDTRQTRKIMNK
CCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHEECCEEEEECCHHHHHHHHHH
FSISNNLVSFNKENSLKRIPKLINDLKAGKSIALVSDAGMPGICDPGEKIVSQAKSQGYD
HHHCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCE
VICIPGACAAITALVSSGMPSSKFIFEGFLPKKKVDRDKILFEISKNEKTTIVYESPHRL
EEEECCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCHHHH
KKLLRELLDFCGGEREIVVARELTKKFEEHVGNNIDSTIEFFKDKEVIGEITIVIKGIQK
HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECHHH
EKNEEINKSDLKKDLNELTNAGLSLTAASKYLAKKYGIKKSIIYNLN
HCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]