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The map label for this gene is rpmH

Identifier: 78779667

GI number: 78779667

Start: 1191680

End: 1191817

Strand: Direct

Name: rpmH

Synonym: PMT9312_1284

Alternate gene names: 78779667

Gene position: 1191680-1191817 (Clockwise)

Preceding gene: 78779666

Following gene: 78779668

Centisome position: 69.72

GC content: 34.78

Gene sequence:

>138_bases
ATGACTAAAAGAACTTTTGGCGGAACTTCAAGAAAAAGAAAACGTGTATCCGGTTTTAGAGTAAGAATGCGTTCTCATAC
TGGTAGAAGAGTTATTAAAAGCAGAAGACAAAAAGGTAGAGAAAGAATAGCTGTCTAA

Upstream 100 bases:

>100_bases
CTCTTATGGGCAACCTAAAGGGAAATCGGTTTCAAGTTATTTAGGAAGCTGGACTATAGTGATCGATTAAATGATAAATT
AATTATGGATAATTAAAAAA

Downstream 100 bases:

>100_bases
CCTAAAATTCAAATGGCCTTACCTAAAGATATGCGATTGAAAGGTCATAGGACTTTTAATTATATTCATAAAAATTCCAT
AAAATATCATGGGAAATTAA

Product: 50S ribosomal protein L34

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 45; Mature: 44

Protein sequence:

>45_residues
MTKRTFGGTSRKRKRVSGFRVRMRSHTGRRVIKSRRQKGRERIAV

Sequences:

>Translated_45_residues
MTKRTFGGTSRKRKRVSGFRVRMRSHTGRRVIKSRRQKGRERIAV
>Mature_44_residues
TKRTFGGTSRKRKRVSGFRVRMRSHTGRRVIKSRRQKGRERIAV

Specific function: Unknown

COG id: COG0230

COG function: function code J; Ribosomal protein L34

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_PROM0 (A3PE32)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001091608.1
- ProteinModelPortal:   A3PE32
- SMR:   A3PE32
- STRING:   A3PE32
- GeneID:   4912301
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_13841
- eggNOG:   COG0230
- HOGENOM:   HBG729750
- ProtClustDB:   PRK00399
- BioCyc:   PMAR167546:P9301ORF_1406-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00391
- InterPro:   IPR000271
- InterPro:   IPR020939
- ProDom:   PD003101
- TIGRFAMs:   TIGR01030

Pfam domain/function: PF00468 Ribosomal_L34

EC number: NA

Molecular weight: Translated: 5373; Mature: 5241

Theoretical pI: Translated: 13.25; Mature: 13.25

Prosite motif: PS00784 RIBOSOMAL_L34

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRTFGGTSRKRKRVSGFRVRMRSHTGRRVIKSRRQKGRERIAV
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TKRTFGGTSRKRKRVSGFRVRMRSHTGRRVIKSRRQKGRERIAV
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA