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The map label for this gene is 78779533

Identifier: 78779533

GI number: 78779533

Start: 1065706

End: 1067346

Strand: Direct

Name: 78779533

Synonym: PMT9312_1150

Alternate gene names: NA

Gene position: 1065706-1067346 (Clockwise)

Preceding gene: 78779532

Following gene: 78779534

Centisome position: 62.35

GC content: 35.71

Gene sequence:

>1641_bases
ATGACTACATTTACTGGAAATTTTACAAGATCAATTTCAGGATCTTCCCCTAATGATAGTTCTGTAACTTTTGGTGTTGA
TTTAGATCAAGCTCCTGTTTATCTGAATGTTGATGTTATCCCAAGTTATGCATTTGCTCGATTAATGCTTGTTTTAGGAA
ATGTAGTAAGAATGCAAGATGCAGGAATTGAAAAGGATCATTCTACTTATCAAGAATGGGTTAGAGGAGAATATTTGAAA
GAATTAAATGATGAAATTAAAGAGAAAAAAGCAAAATTACCAGCTTTATTAGAAAAGAAAAATAAAATTACAAAGCTATT
AAAATCGATTAAAGAAAAGGGTGAAAAGTATGATTCAAAGAATTTTCTTAAGGAAAGAAACACTTTTTGGAAATGGCTTT
ATACCCATAATCGACAAGCTTGGTATGTTCTCGACCCTATCGTAAGCGTCCAGCCTGATGCAACTTTTTTTGAAGCATTT
TCATTAGATGAATCTACATATGCGCGGGTATCGCTTCCTCATTCGGCAACAAAATCTAATAAAAAACCATCATGTGGAAC
TACTAATATAGATTTCAGTGTCTCGCTTGAAAGGGAACTTGCAAGGACTAGAAACTATAGACCTTTGCATCTTACTGTAG
GTTCAGATTCAGTTGGAGTCGATACTGGAGTTTCTTCTACTGTTGAGAAGAAAATAGATCTCCCAGAATCATGGGTAAGA
GGATTGGTTGAGGTGCAGGCAGCTTTATCTTTAGCACCAGTTGAGCTGACTTTATCTTCTTCTTATCTTGCTGATATTCT
TGCAAGATTAGAATCAGAAAGAGAAAGGGAAGGTCCAAGAGCATTAGTATTTAATATGAAACCCGGAGAAAAGCCTGAAA
TAGAAATACAACCTTGGGGAGAAATTCATAAAGTATCTGACAAACTTTATACAGGTGAAGAGAATCGAAAAATTAAAGTC
TGGGGAAGACGCAGACTTCGTGTTTTGAGTAATTTATTATCGATTGTTCCAGAATTGAAAGTCAGATTAATAGATTCGGG
GATGCCATCTTTTTGGAGTATTGAGATAGAGGATGTAGTTTTAACAATTGGTATATCTGGATGGACTTCACAAGACTGGG
CAGGGAGAGCAAGGTTTTCTGCTATTACTCCTGCATCTGATTTATCTCCAAATATCATTGAAAATGCATCAACTCTTCTG
AAGAAAAAAAATGCTTTATCCGTGGATGAATTAGCAAATAAAATTAATCAGAGCCCTGGAGATTGTCGTCGAATTCTTCA
GAGTTTGTGTATTAAGGGATTAGCCATGTTCGATCCTGAAAATGGAAAATATCGTTGGCGGGCTCTTTTCCCATCTCTAA
ATCTTGAAAGTCAATCTGAAGCTGGAGTAGAGGAAAGAAAAGGTTTAGAGATATTCAAGTCAAATAAAATCAAGATAATT
TCAGACCAGATAACTTCCAAGGGTCGTGAACTTAAAGGTCTCGTAGAGTCACATGAAAAAATAAATCAACCTTCCATTAT
CAAAGATTTGGATGGCCGAGTCATTAATGCGCAATGCGACTGTTCTCATTTTCGATTTCATAAACTTAGACAAGGACCTT
GTAGACATATTGTTTGCTTAAGCTTGAAGGGAGGTGGATAA

Upstream 100 bases:

>100_bases
GAGATAGAGAATGGGCTCTGAATCGGATCGCTTCCCTCAGTATCAAGGGAGTTAGATTTGATGGAATTGAAATAGAAAAG
ACTAATACAAGGAGAAATAA

Downstream 100 bases:

>100_bases
GATGTCAGAACAAGATGCGGACCAAAGTAATTCTTTGAATAATCAATGGAAAAAAAGATTACAAGAGATAGGGCAGGGGG
CTTTTGAATTTGAAGAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: Zinc Finger SWIM Domain-Containing Protein; Swim Zinc Finger Domain Protein; Zinc Finger SWIM Domain Protein; Zinc Finger SWIM-Type

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MTTFTGNFTRSISGSSPNDSSVTFGVDLDQAPVYLNVDVIPSYAFARLMLVLGNVVRMQDAGIEKDHSTYQEWVRGEYLK
ELNDEIKEKKAKLPALLEKKNKITKLLKSIKEKGEKYDSKNFLKERNTFWKWLYTHNRQAWYVLDPIVSVQPDATFFEAF
SLDESTYARVSLPHSATKSNKKPSCGTTNIDFSVSLERELARTRNYRPLHLTVGSDSVGVDTGVSSTVEKKIDLPESWVR
GLVEVQAALSLAPVELTLSSSYLADILARLESEREREGPRALVFNMKPGEKPEIEIQPWGEIHKVSDKLYTGEENRKIKV
WGRRRLRVLSNLLSIVPELKVRLIDSGMPSFWSIEIEDVVLTIGISGWTSQDWAGRARFSAITPASDLSPNIIENASTLL
KKKNALSVDELANKINQSPGDCRRILQSLCIKGLAMFDPENGKYRWRALFPSLNLESQSEAGVEERKGLEIFKSNKIKII
SDQITSKGRELKGLVESHEKINQPSIIKDLDGRVINAQCDCSHFRFHKLRQGPCRHIVCLSLKGGG

Sequences:

>Translated_546_residues
MTTFTGNFTRSISGSSPNDSSVTFGVDLDQAPVYLNVDVIPSYAFARLMLVLGNVVRMQDAGIEKDHSTYQEWVRGEYLK
ELNDEIKEKKAKLPALLEKKNKITKLLKSIKEKGEKYDSKNFLKERNTFWKWLYTHNRQAWYVLDPIVSVQPDATFFEAF
SLDESTYARVSLPHSATKSNKKPSCGTTNIDFSVSLERELARTRNYRPLHLTVGSDSVGVDTGVSSTVEKKIDLPESWVR
GLVEVQAALSLAPVELTLSSSYLADILARLESEREREGPRALVFNMKPGEKPEIEIQPWGEIHKVSDKLYTGEENRKIKV
WGRRRLRVLSNLLSIVPELKVRLIDSGMPSFWSIEIEDVVLTIGISGWTSQDWAGRARFSAITPASDLSPNIIENASTLL
KKKNALSVDELANKINQSPGDCRRILQSLCIKGLAMFDPENGKYRWRALFPSLNLESQSEAGVEERKGLEIFKSNKIKII
SDQITSKGRELKGLVESHEKINQPSIIKDLDGRVINAQCDCSHFRFHKLRQGPCRHIVCLSLKGGG
>Mature_545_residues
TTFTGNFTRSISGSSPNDSSVTFGVDLDQAPVYLNVDVIPSYAFARLMLVLGNVVRMQDAGIEKDHSTYQEWVRGEYLKE
LNDEIKEKKAKLPALLEKKNKITKLLKSIKEKGEKYDSKNFLKERNTFWKWLYTHNRQAWYVLDPIVSVQPDATFFEAFS
LDESTYARVSLPHSATKSNKKPSCGTTNIDFSVSLERELARTRNYRPLHLTVGSDSVGVDTGVSSTVEKKIDLPESWVRG
LVEVQAALSLAPVELTLSSSYLADILARLESEREREGPRALVFNMKPGEKPEIEIQPWGEIHKVSDKLYTGEENRKIKVW
GRRRLRVLSNLLSIVPELKVRLIDSGMPSFWSIEIEDVVLTIGISGWTSQDWAGRARFSAITPASDLSPNIIENASTLLK
KKNALSVDELANKINQSPGDCRRILQSLCIKGLAMFDPENGKYRWRALFPSLNLESQSEAGVEERKGLEIFKSNKIKIIS
DQITSKGRELKGLVESHEKINQPSIIKDLDGRVINAQCDCSHFRFHKLRQGPCRHIVCLSLKGGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61513; Mature: 61382

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFTGNFTRSISGSSPNDSSVTFGVDLDQAPVYLNVDVIPSYAFARLMLVLGNVVRMQD
CCCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHC
AGIEKDHSTYQEWVRGEYLKELNDEIKEKKAKLPALLEKKNKITKLLKSIKEKGEKYDSK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHH
NFLKERNTFWKWLYTHNRQAWYVLDPIVSVQPDATFFEAFSLDESTYARVSLPHSATKSN
HHHHHHCHHEEEEEECCCCEEEEECCCEECCCCCHHHHEECCCCCCEEEEECCCCCCCCC
KKPSCGTTNIDFSVSLERELARTRNYRPLHLTVGSDSVGVDTGVSSTVEKKIDLPESWVR
CCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHH
GLVEVQAALSLAPVELTLSSSYLADILARLESEREREGPRALVFNMKPGEKPEIEIQPWG
HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCC
EIHKVSDKLYTGEENRKIKVWGRRRLRVLSNLLSIVPELKVRLIDSGMPSFWSIEIEDVV
HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE
LTIGISGWTSQDWAGRARFSAITPASDLSPNIIENASTLLKKKNALSVDELANKINQSPG
EEEEECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH
DCRRILQSLCIKGLAMFDPENGKYRWRALFPSLNLESQSEAGVEERKGLEIFKSNKIKII
HHHHHHHHHHHCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCEECCCCEEEE
SDQITSKGRELKGLVESHEKINQPSIIKDLDGRVINAQCDCSHFRFHKLRQGPCRHIVCL
EHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCCEEEEEECCCCHHHHHHHCCCCCCEEEEE
SLKGGG
EECCCC
>Mature Secondary Structure 
TTFTGNFTRSISGSSPNDSSVTFGVDLDQAPVYLNVDVIPSYAFARLMLVLGNVVRMQD
CCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHC
AGIEKDHSTYQEWVRGEYLKELNDEIKEKKAKLPALLEKKNKITKLLKSIKEKGEKYDSK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHH
NFLKERNTFWKWLYTHNRQAWYVLDPIVSVQPDATFFEAFSLDESTYARVSLPHSATKSN
HHHHHHCHHEEEEEECCCCEEEEECCCEECCCCCHHHHEECCCCCCEEEEECCCCCCCCC
KKPSCGTTNIDFSVSLERELARTRNYRPLHLTVGSDSVGVDTGVSSTVEKKIDLPESWVR
CCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHH
GLVEVQAALSLAPVELTLSSSYLADILARLESEREREGPRALVFNMKPGEKPEIEIQPWG
HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCC
EIHKVSDKLYTGEENRKIKVWGRRRLRVLSNLLSIVPELKVRLIDSGMPSFWSIEIEDVV
HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE
LTIGISGWTSQDWAGRARFSAITPASDLSPNIIENASTLLKKKNALSVDELANKINQSPG
EEEEECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH
DCRRILQSLCIKGLAMFDPENGKYRWRALFPSLNLESQSEAGVEERKGLEIFKSNKIKII
HHHHHHHHHHHCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCEECCCCEEEE
SDQITSKGRELKGLVESHEKINQPSIIKDLDGRVINAQCDCSHFRFHKLRQGPCRHIVCL
EHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCCEEEEEECCCCHHHHHHHCCCCCCEEEEE
SLKGGG
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA