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The map label for this gene is ydhD [C]

Identifier: 78779505

GI number: 78779505

Start: 1037922

End: 1038245

Strand: Direct

Name: ydhD [C]

Synonym: PMT9312_1122

Alternate gene names: 78779505

Gene position: 1037922-1038245 (Clockwise)

Preceding gene: 78779504

Following gene: 78779507

Centisome position: 60.73

GC content: 32.1

Gene sequence:

>324_bases
ATGGACAACTTAACAAAAGATAAAATACAAAAACTGATTGACTCTAATCCAGTTATGGTATTCATGAAAGGGACTAAATT
AATGCCTCAATGCGGTTTCTCCAACAATGTAGTTCAAATACTTAATTCCCTAGGTATTGAATTTGGTACTTTTGATGTTT
TAAGCGATTTCGAAGTACGAGAAGGTATTAAAAAATATTCCGATTGGCCAACAATTCCTCAAGTTTATTTAAAAGGAGAA
TTTCTTGGTGGATCAGACATTCTTATCGAAATGTACAACTCAGGAGCTCTGAAAGAAAAAATAGAAATTGAATTAGCGTC
TTAA

Upstream 100 bases:

>100_bases
AGTTAAACAACATCAGCTAGTCTATTCTGCATTAAAGGAAGAATTAGCTTCAGAGGCTATCCATGCACTGGCATTAAAAA
CAGAAACACCTAATTGAATT

Downstream 100 bases:

>100_bases
CACATTTAATAAGTATAAATACTGATTTGATTAATAAAAATTAATATTTTAAATCCTTTTTTTATCAAAAAAACCCTTAT
TTTCGTCTCCTTCTGGATCA

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MDNLTKDKIQKLIDSNPVMVFMKGTKLMPQCGFSNNVVQILNSLGIEFGTFDVLSDFEVREGIKKYSDWPTIPQVYLKGE
FLGGSDILIEMYNSGALKEKIEIELAS

Sequences:

>Translated_107_residues
MDNLTKDKIQKLIDSNPVMVFMKGTKLMPQCGFSNNVVQILNSLGIEFGTFDVLSDFEVREGIKKYSDWPTIPQVYLKGE
FLGGSDILIEMYNSGALKEKIEIELAS
>Mature_107_residues
MDNLTKDKIQKLIDSNPVMVFMKGTKLMPQCGFSNNVVQILNSLGIEFGTFDVLSDFEVREGIKKYSDWPTIPQVYLKGE
FLGGSDILIEMYNSGALKEKIEIELAS

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=97, Percent_Identity=52.5773195876289, Blast_Score=113, Evalue=3e-26,
Organism=Homo sapiens, GI95113651, Length=92, Percent_Identity=50, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787943, Length=100, Percent_Identity=43, Blast_Score=104, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17556042, Length=95, Percent_Identity=48.4210526315789, Blast_Score=105, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71988159, Length=86, Percent_Identity=50, Blast_Score=103, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71988153, Length=86, Percent_Identity=50, Blast_Score=102, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6325198, Length=100, Percent_Identity=45, Blast_Score=102, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6321022, Length=83, Percent_Identity=53.0120481927711, Blast_Score=100, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6320303, Length=83, Percent_Identity=50.6024096385542, Blast_Score=100, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24642023, Length=97, Percent_Identity=50.5154639175258, Blast_Score=115, Evalue=5e-27,
Organism=Drosophila melanogaster, GI19921242, Length=97, Percent_Identity=45.360824742268, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12025; Mature: 12025

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLTKDKIQKLIDSNPVMVFMKGTKLMPQCGFSNNVVQILNSLGIEFGTFDVLSDFEVR
CCCCCHHHHHHHHCCCCEEEEEECCEECCCCCCCCCHHHHHHHHCCCCCCHHHHCCCHHH
EGIKKYSDWPTIPQVYLKGEFLGGSDILIEMYNSGALKEKIEIELAS
HHHHHHCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MDNLTKDKIQKLIDSNPVMVFMKGTKLMPQCGFSNNVVQILNSLGIEFGTFDVLSDFEVR
CCCCCHHHHHHHHCCCCEEEEEECCEECCCCCCCCCHHHHHHHHCCCCCCHHHHCCCHHH
EGIKKYSDWPTIPQVYLKGEFLGGSDILIEMYNSGALKEKIEIELAS
HHHHHHCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]