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The map label for this gene is dmpD [H]

Identifier: 78779480

GI number: 78779480

Start: 1009282

End: 1010181

Strand: Reverse

Name: dmpD [H]

Synonym: PMT9312_1097

Alternate gene names: 78779480

Gene position: 1010181-1009282 (Counterclockwise)

Preceding gene: 78779481

Following gene: 78779477

Centisome position: 59.1

GC content: 32.33

Gene sequence:

>900_bases
TTGACTAAAAACCATTTTGAACAATTAAATAATTTAAATGTGGAATTTTTCGAAAGTGCCAAATTGTCACTATTAGACCC
ATTAGGTCTTTATTTGGCAAATGATGTTAAGTGGATAAAACTCAATGAAAATTGGAACTCTTTAAAATTTCCTGTGGTTA
TGGGAGGAGAAGGTCAACCTATACTTCTTCTACATGGCTTTGATAGTAGTTTTTTAGAGTTTAGGAGAATATATAAATCA
TTAAAAAGAAATTTCCAAGTTATAATTCCTGATCTATTAGGTTTTGGTTTTAGTCCTAGGTGCGCAACAAATGAATACAA
TTCCTCGAAAATAATTTCGTATTTAATTGATCTTCTTAAGACCTTACAAATAACTAAGAATCTAAAAATTATTGGTGCCT
CTATGGGTGGCTCAACATCTTTAAAACTTGCTTTCGAAATTCCTGATTCTATTGATAAAATTATCCTTTTATCCCCGGCT
GGATTATTCGGAGAACCTAAGAGTATCCCTTTCCCTCTTAACCAAATTGGGGCCTCATTTCTTGGATTGCCGCAGGTCAG
AAAAAGTCTTTGTAGGCAAGCATTTGCTTTTCCAGATGAATGTGTTGGTGAGATGGAAGAGCAAATTGCTTCAATTCATT
TAGGTTGTAAAGGATGGAGGAATTCACTTGCATCATTTGCAAAAAGTGGAGGGTTTGCTGGAACACATAAATATATCCAA
AACATCCCTATTAAAACATTATGTGGAGAAAATGATCGCATTCTAGGAAAAAAAGAGATTAAAAATATAAGTAAAATTGA
AAAATTAAATTTTGTAGGCTTGCAAAATTGTGGTCATCTTCCTCATGTCGATCTACCATCATTATCTAGTAAAATTATCC
AAGATTATTTTTTGGAATAA

Upstream 100 bases:

>100_bases
AATCTGAGATTCATTTTTTGCCTTTTGAAATTTTTAAACAGGACATAATAGAGGTCATTACAAATTTTGAACAACAAAAA
ATTAAAATATAATCATTTTT

Downstream 100 bases:

>100_bases
AAGATTTTTAATTAATTTAGATATTTGAGAATTATAAAAATATAATATAAAACAGATGGAGTAAAGATGTAACTGTCAAT
TCTGTCAAGAATACCTCCAT

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: HMSH [H]

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTKNHFEQLNNLNVEFFESAKLSLLDPLGLYLANDVKWIKLNENWNSLKFPVVMGGEGQPILLLHGFDSSFLEFRRIYKS
LKRNFQVIIPDLLGFGFSPRCATNEYNSSKIISYLIDLLKTLQITKNLKIIGASMGGSTSLKLAFEIPDSIDKIILLSPA
GLFGEPKSIPFPLNQIGASFLGLPQVRKSLCRQAFAFPDECVGEMEEQIASIHLGCKGWRNSLASFAKSGGFAGTHKYIQ
NIPIKTLCGENDRILGKKEIKNISKIEKLNFVGLQNCGHLPHVDLPSLSSKIIQDYFLE

Sequences:

>Translated_299_residues
MTKNHFEQLNNLNVEFFESAKLSLLDPLGLYLANDVKWIKLNENWNSLKFPVVMGGEGQPILLLHGFDSSFLEFRRIYKS
LKRNFQVIIPDLLGFGFSPRCATNEYNSSKIISYLIDLLKTLQITKNLKIIGASMGGSTSLKLAFEIPDSIDKIILLSPA
GLFGEPKSIPFPLNQIGASFLGLPQVRKSLCRQAFAFPDECVGEMEEQIASIHLGCKGWRNSLASFAKSGGFAGTHKYIQ
NIPIKTLCGENDRILGKKEIKNISKIEKLNFVGLQNCGHLPHVDLPSLSSKIIQDYFLE
>Mature_298_residues
TKNHFEQLNNLNVEFFESAKLSLLDPLGLYLANDVKWIKLNENWNSLKFPVVMGGEGQPILLLHGFDSSFLEFRRIYKSL
KRNFQVIIPDLLGFGFSPRCATNEYNSSKIISYLIDLLKTLQITKNLKIIGASMGGSTSLKLAFEIPDSIDKIILLSPAG
LFGEPKSIPFPLNQIGASFLGLPQVRKSLCRQAFAFPDECVGEMEEQIASIHLGCKGWRNSLASFAKSGGFAGTHKYIQN
IPIKTLCGENDRILGKKEIKNISKIEKLNFVGLQNCGHLPHVDLPSLSSKIIQDYFLE

Specific function: Conversion of 2-hydroxymuconic acid semialdehyde to 2- hydroxypent-2,4-dienoate [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 33380; Mature: 33249

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNHFEQLNNLNVEFFESAKLSLLDPLGLYLANDVKWIKLNENWNSLKFPVVMGGEGQP
CCHHHHHHHHCCCEEEECCCCHHHHCHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCE
ILLLHGFDSSFLEFRRIYKSLKRNFQVIIPDLLGFGFSPRCATNEYNSSKIISYLIDLLK
EEEEECCCHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
TLQITKNLKIIGASMGGSTSLKLAFEIPDSIDKIILLSPAGLFGEPKSIPFPLNQIGASF
HHHHHCCCEEEEECCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
LGLPQVRKSLCRQAFAFPDECVGEMEEQIASIHLGCKGWRNSLASFAKSGGFAGTHKYIQ
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH
NIPIKTLCGENDRILGKKEIKNISKIEKLNFVGLQNCGHLPHVDLPSLSSKIIQDYFLE
CCCCCEECCCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKNHFEQLNNLNVEFFESAKLSLLDPLGLYLANDVKWIKLNENWNSLKFPVVMGGEGQP
CHHHHHHHHCCCEEEECCCCHHHHCHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCE
ILLLHGFDSSFLEFRRIYKSLKRNFQVIIPDLLGFGFSPRCATNEYNSSKIISYLIDLLK
EEEEECCCHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
TLQITKNLKIIGASMGGSTSLKLAFEIPDSIDKIILLSPAGLFGEPKSIPFPLNQIGASF
HHHHHCCCEEEEECCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
LGLPQVRKSLCRQAFAFPDECVGEMEEQIASIHLGCKGWRNSLASFAKSGGFAGTHKYIQ
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH
NIPIKTLCGENDRILGKKEIKNISKIEKLNFVGLQNCGHLPHVDLPSLSSKIIQDYFLE
CCCCCEECCCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2194577 [H]