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The map label for this gene is petH [H]

Identifier: 78779469

GI number: 78779469

Start: 997640

End: 998752

Strand: Reverse

Name: petH [H]

Synonym: PMT9312_1086

Alternate gene names: 78779469

Gene position: 998752-997640 (Counterclockwise)

Preceding gene: 78779471

Following gene: 78779468

Centisome position: 58.43

GC content: 36.12

Gene sequence:

>1113_bases
ATGTATTCACAATCAACAGTTATCGCAGGCGGCTTAGCTCATATACCAGTAGTAATAGGAGTTTTTTATTTTATTCTAAA
AACTTTTAGTAAAAGGGCCTCAAACTTCCCTCAAGATACAGAGCCAAAAAAATCTCAGGTAAAATCTGTTGAACAAAAAT
CAGTTCCTAAGCCTGCACCTGTTGCAAAGGGAGTAACGAATAATGTTGTTAAGAAGAAGAAGCATGCTGATGTACCAGTA
AATATCTATAGACCAAAGACACCTTATGAAGGCACAGTAATAGAAAACTACAGTCTTCTTAAAGAAGGAGCTATTGGTAG
AGTAAATCATATAACTTTCGACCTCAAAGATAGTGATCCATTCTTAAATTATGTTGAAGGCCAAAGCATTGGTATCATGC
CTGCTGGAGAGGATGCTAATGGAAAGCCTCATAAATTAAGACTTTACTCAATAGCTAGCACCAGACATGGAGATGATTAT
AAAGGAAATACTGTTTCTCTTTGTGTTAGACAGCTTCAGTACGAAAAAGATGGTGAAACGATCAATGGAGTTTGTTCCAC
TTACTTATGCGATATTAAGCCTGGAGATAAAGTTAAAATAACAGGCCCTGTAGGTAAGGAGATGCTTCTTCCAGATGAAG
AGGATGCAAACATAGTTATGTTAGCTACTGGAACTGGAATAGCCCCCATGAGAGCTTATTTAAGAAGAATGTTTGAAGCA
ACTGAAAAAGAAAAAAATAAATGGAATTTCAAAGGTAAAGCTTGGTTATTTATGGGTGCTCCTAAATCAGCTAATTTGTT
ATACGAGGAAGATCTTCAGAGATATCTAACTGATTATCCAGATAATTTCACATATACAAAAGCTATTAGCCGTGAACAGC
AAAATACAAAAGGTGGAAGAATGTATATTCAAGACAGAGTTTTAGAATCAGCTAACGAGCTTTTCAATATGATTGAAGAT
GAGAAGACTCATATATATCTTTGCGGATTAAAGGGTATGGAGCCTGGAATAGATGAAGCTATGACAAAGGCGGCTGAAGA
AAAAGGATTGAACTGGTCAGAATTAAGACCTCAACTAAAAAAAGCAGGAAGATGGCACGTAGAAACCTACTAA

Upstream 100 bases:

>100_bases
TTTGATTAAATTATTCCGATCTCAAAACGTAACCATTTTTATAAAATCACTACAAATTAAACTACAAATTGATAATCTTT
TATATAAAGAAAACTAAAAA

Downstream 100 bases:

>100_bases
ATCATAAGATTTAGATATAAGTTTCTCCTACTAAATACTTTTTGGTTTAGACACAATATGTAGCTAATCTTAGAAAAAAA
GAGGATTTTAAAAAAAGAAT

Product: ferredoxin-NADP oxidoreductase (FNR)

Products: NA

Alternate protein names: FNR [H]

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MYSQSTVIAGGLAHIPVVIGVFYFILKTFSKRASNFPQDTEPKKSQVKSVEQKSVPKPAPVAKGVTNNVVKKKKHADVPV
NIYRPKTPYEGTVIENYSLLKEGAIGRVNHITFDLKDSDPFLNYVEGQSIGIMPAGEDANGKPHKLRLYSIASTRHGDDY
KGNTVSLCVRQLQYEKDGETINGVCSTYLCDIKPGDKVKITGPVGKEMLLPDEEDANIVMLATGTGIAPMRAYLRRMFEA
TEKEKNKWNFKGKAWLFMGAPKSANLLYEEDLQRYLTDYPDNFTYTKAISREQQNTKGGRMYIQDRVLESANELFNMIED
EKTHIYLCGLKGMEPGIDEAMTKAAEEKGLNWSELRPQLKKAGRWHVETY

Sequences:

>Translated_370_residues
MYSQSTVIAGGLAHIPVVIGVFYFILKTFSKRASNFPQDTEPKKSQVKSVEQKSVPKPAPVAKGVTNNVVKKKKHADVPV
NIYRPKTPYEGTVIENYSLLKEGAIGRVNHITFDLKDSDPFLNYVEGQSIGIMPAGEDANGKPHKLRLYSIASTRHGDDY
KGNTVSLCVRQLQYEKDGETINGVCSTYLCDIKPGDKVKITGPVGKEMLLPDEEDANIVMLATGTGIAPMRAYLRRMFEA
TEKEKNKWNFKGKAWLFMGAPKSANLLYEEDLQRYLTDYPDNFTYTKAISREQQNTKGGRMYIQDRVLESANELFNMIED
EKTHIYLCGLKGMEPGIDEAMTKAAEEKGLNWSELRPQLKKAGRWHVETY
>Mature_370_residues
MYSQSTVIAGGLAHIPVVIGVFYFILKTFSKRASNFPQDTEPKKSQVKSVEQKSVPKPAPVAKGVTNNVVKKKKHADVPV
NIYRPKTPYEGTVIENYSLLKEGAIGRVNHITFDLKDSDPFLNYVEGQSIGIMPAGEDANGKPHKLRLYSIASTRHGDDY
KGNTVSLCVRQLQYEKDGETINGVCSTYLCDIKPGDKVKITGPVGKEMLLPDEEDANIVMLATGTGIAPMRAYLRRMFEA
TEKEKNKWNFKGKAWLFMGAPKSANLLYEEDLQRYLTDYPDNFTYTKAISREQQNTKGGRMYIQDRVLESANELFNMIED
EKTHIYLCGLKGMEPGIDEAMTKAAEEKGLNWSELRPQLKKAGRWHVETY

Specific function: Essential for growth [H]

COG id: COG0369

COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=May be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789123, Length=227, Percent_Identity=29.9559471365639, Blast_Score=86, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17554134, Length=210, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6321143, Length=237, Percent_Identity=29.535864978903, Blast_Score=70, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6321832, Length=168, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24582192, Length=269, Percent_Identity=27.5092936802974, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24583543, Length=207, Percent_Identity=28.0193236714976, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI78706876, Length=207, Percent_Identity=28.0193236714976, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI78706872, Length=207, Percent_Identity=28.0193236714976, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17137192, Length=269, Percent_Identity=27.5092936802974, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017927
- InterPro:   IPR001709
- InterPro:   IPR012146
- InterPro:   IPR015701
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR008213
- InterPro:   IPR017938 [H]

Pfam domain/function: PF01383 CpcD; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.2 [H]

Molecular weight: Translated: 41633; Mature: 41633

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSQSTVIAGGLAHIPVVIGVFYFILKTFSKRASNFPQDTEPKKSQVKSVEQKSVPKPAP
CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC
VAKGVTNNVVKKKKHADVPVNIYRPKTPYEGTVIENYSLLKEGAIGRVNHITFDLKDSDP
HHCCCHHHHHHHHHCCCCCEEEECCCCCCCCEEECCHHHHHCCCCCEEEEEEEEECCCCC
FLNYVEGQSIGIMPAGEDANGKPHKLRLYSIASTRHGDDYKGNTVSLCVRQLQYEKDGET
CCEEECCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCH
INGVCSTYLCDIKPGDKVKITGPVGKEMLLPDEEDANIVMLATGTGIAPMRAYLRRMFEA
HHHHHHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
TEKEKNKWNFKGKAWLFMGAPKSANLLYEEDLQRYLTDYPDNFTYTKAISREQQNTKGGR
HHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCE
MYIQDRVLESANELFNMIEDEKTHIYLCGLKGMEPGIDEAMTKAAEEKGLNWSELRPQLK
EEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
KAGRWHVETY
HCCCEEECCC
>Mature Secondary Structure
MYSQSTVIAGGLAHIPVVIGVFYFILKTFSKRASNFPQDTEPKKSQVKSVEQKSVPKPAP
CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC
VAKGVTNNVVKKKKHADVPVNIYRPKTPYEGTVIENYSLLKEGAIGRVNHITFDLKDSDP
HHCCCHHHHHHHHHCCCCCEEEECCCCCCCCEEECCHHHHHCCCCCEEEEEEEEECCCCC
FLNYVEGQSIGIMPAGEDANGKPHKLRLYSIASTRHGDDYKGNTVSLCVRQLQYEKDGET
CCEEECCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCH
INGVCSTYLCDIKPGDKVKITGPVGKEMLLPDEEDANIVMLATGTGIAPMRAYLRRMFEA
HHHHHHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
TEKEKNKWNFKGKAWLFMGAPKSANLLYEEDLQRYLTDYPDNFTYTKAISREQQNTKGGR
HHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCE
MYIQDRVLESANELFNMIEDEKTHIYLCGLKGMEPGIDEAMTKAAEEKGLNWSELRPQLK
EEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
KAGRWHVETY
HCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]