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The map label for this gene is cytM [H]

Identifier: 78779451

GI number: 78779451

Start: 977992

End: 978378

Strand: Reverse

Name: cytM [H]

Synonym: PMT9312_1068

Alternate gene names: 78779451

Gene position: 978378-977992 (Counterclockwise)

Preceding gene: 78779453

Following gene: 78779450

Centisome position: 57.24

GC content: 30.49

Gene sequence:

>387_bases
GTGTCAACATCTTCATCATCTGCAGCAGAAAGAGACATTAAAAGAGAATTTTTCAAAAAGTTTTTTATTGTTTTTATAGT
TTCATTGTTATGTTTTTCAATATTTTTCTTAAATAATCATGAAAATAATAAATATATTATTGATACTCTTGAGCTTAATG
GATCTGCTAAGGAAGGAGATGCTCTTTTTAAGATAAATTGTGTTGGATGTCATGGAATTACAGCAAGAGGATTAGTGGGG
CCAGACTTGCATTCAATAACTCAACGATTGAATGATAAAGAGATAATAAAACAAGTTACTGGTGGGCTTACTCCTCCCAT
GCCAAGTTTTGAAATTGATCCTGTAAATATGTCCAATTTGTTAAAATATCTACATAGCCTTGAATGA

Upstream 100 bases:

>100_bases
TGGAACTAACCCTAAAACAATTCCACATAGAAGAGGCTCGATCATTTTTTTGCCTTTTTTGAATTTCTTACTAACAATTT
TTACATAGAGACTATTTTTT

Downstream 100 bases:

>100_bases
TTTTGGGGAAAAATTTTTCTAATTTAAAAGTAATATTAGTTGAACCAAACGGCCCTTTAAATGTTGGGAGTGTAGCAAGG
TTATGCTCCAATTTTGAAGT

Product: cytochrome cM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSTSSSSAAERDIKREFFKKFFIVFIVSLLCFSIFFLNNHENNKYIIDTLELNGSAKEGDALFKINCVGCHGITARGLVG
PDLHSITQRLNDKEIIKQVTGGLTPPMPSFEIDPVNMSNLLKYLHSLE

Sequences:

>Translated_128_residues
MSTSSSSAAERDIKREFFKKFFIVFIVSLLCFSIFFLNNHENNKYIIDTLELNGSAKEGDALFKINCVGCHGITARGLVG
PDLHSITQRLNDKEIIKQVTGGLTPPMPSFEIDPVNMSNLLKYLHSLE
>Mature_127_residues
STSSSSAAERDIKREFFKKFFIVFIVSLLCFSIFFLNNHENNKYIIDTLELNGSAKEGDALFKINCVGCHGITARGLVGP
DLHSITQRLNDKEIIKQVTGGLTPPMPSFEIDPVNMSNLLKYLHSLE

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 14339; Mature: 14208

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSSSSAAERDIKREFFKKFFIVFIVSLLCFSIFFLNNHENNKYIIDTLELNGSAKEGD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCC
ALFKINCVGCHGITARGLVGPDLHSITQRLNDKEIIKQVTGGLTPPMPSFEIDPVNMSNL
EEEEEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEECCCCHHHH
LKYLHSLE
HHHHHHCC
>Mature Secondary Structure 
STSSSSAAERDIKREFFKKFFIVFIVSLLCFSIFFLNNHENNKYIIDTLELNGSAKEGD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCC
ALFKINCVGCHGITARGLVGPDLHSITQRLNDKEIIKQVTGGLTPPMPSFEIDPVNMSNL
EEEEEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEECCCCHHHH
LKYLHSLE
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]