Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is fur [H]

Identifier: 78779424

GI number: 78779424

Start: 954057

End: 954491

Strand: Direct

Name: fur [H]

Synonym: PMT9312_1041

Alternate gene names: 78779424

Gene position: 954057-954491 (Clockwise)

Preceding gene: 78779422

Following gene: 78779426

Centisome position: 55.82

GC content: 37.01

Gene sequence:

>435_bases
ATGATCAAAAATACGGGACAAAAAAAGATTTCGGAAACAATGGTAACTAATTCTGACATTACCAAAAGACAAGAACAACT
TCTTGAAGAACTTAATAAATGCGAGGATGAATTGACTGGTCAAAAGTTGCATAGACAATTGATAGAAAGAGGAAAGGTTA
TGGGACTGACGACTGTTTACAGGAATCTTCAAGTTCTGATAAAGCATGGCTTAATACGTTCTAGACATCTCCCAACTGGA
GAGGTTCTGTACACTCCCGTAGATAGAGATATTCATCATTTGACCTGTGTTCAATGTGGTGAGACATCAAAAATGGAAGG
ATGCCCGGTAAAAGATATTCATACACCCAAAACAAATCCAAAGAAATTCCAATTGTTGTTTCATACCCTCGAGTATTTCG
GGCTTTGCCAAAACTGTTATCAAGCTCAGAATTAA

Upstream 100 bases:

>100_bases
GTTCCCATAGCTGGGCATAAAATCCCGGAGAATATAGTTATTATTAATGGAACCAGCCACCAGTTGTTATTAATAAAAGA
CATTATTCGAATGATTCGGT

Downstream 100 bases:

>100_bases
AAAGGAACATTCTCTAATCACAGAAATTATTTTCGTTTATAGAGCTAATGTTTATTGCCTCTAATTTATCTTTTATTTGG
TCAGGACTACCAACTGCCAA

Product: ferric uptake regulator family protein

Products: NA

Alternate protein names: Ferric uptake regulator [H]

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MIKNTGQKKISETMVTNSDITKRQEQLLEELNKCEDELTGQKLHRQLIERGKVMGLTTVYRNLQVLIKHGLIRSRHLPTG
EVLYTPVDRDIHHLTCVQCGETSKMEGCPVKDIHTPKTNPKKFQLLFHTLEYFGLCQNCYQAQN

Sequences:

>Translated_144_residues
MIKNTGQKKISETMVTNSDITKRQEQLLEELNKCEDELTGQKLHRQLIERGKVMGLTTVYRNLQVLIKHGLIRSRHLPTG
EVLYTPVDRDIHHLTCVQCGETSKMEGCPVKDIHTPKTNPKKFQLLFHTLEYFGLCQNCYQAQN
>Mature_144_residues
MIKNTGQKKISETMVTNSDITKRQEQLLEELNKCEDELTGQKLHRQLIERGKVMGLTTVYRNLQVLIKHGLIRSRHLPTG
EVLYTPVDRDIHHLTCVQCGETSKMEGCPVKDIHTPKTNPKKFQLLFHTLEYFGLCQNCYQAQN

Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of the fbp protein [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

None

Paralogues:

None

Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 16636; Mature: 16636

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNTGQKKISETMVTNSDITKRQEQLLEELNKCEDELTGQKLHRQLIERGKVMGLTTVY
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RNLQVLIKHGLIRSRHLPTGEVLYTPVDRDIHHLTCVQCGETSKMEGCPVKDIHTPKTNP
HHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
KKFQLLFHTLEYFGLCQNCYQAQN
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKNTGQKKISETMVTNSDITKRQEQLLEELNKCEDELTGQKLHRQLIERGKVMGLTTVY
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RNLQVLIKHGLIRSRHLPTGEVLYTPVDRDIHHLTCVQCGETSKMEGCPVKDIHTPKTNP
HHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
KKFQLLFHTLEYFGLCQNCYQAQN
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8406856 [H]