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The map label for this gene is 78779371

Identifier: 78779371

GI number: 78779371

Start: 919922

End: 920263

Strand: Direct

Name: 78779371

Synonym: PMT9312_0987

Alternate gene names: NA

Gene position: 919922-920263 (Clockwise)

Preceding gene: 78779367

Following gene: 78779373

Centisome position: 53.82

GC content: 34.5

Gene sequence:

>342_bases
ATGCATAGGCAAGATGCAATTTACCTTGATCAACTATGTCCCAAGATAAGTAATAAAAGTTGGAGAGAGTCACTTCATAA
ACTTACTAAATATAAATGCATTTATTGCGGTAAACCATCAGAATCCCTTGATCATCTTCATCCAATGTCACAAGGAGGTA
AAAGCAGTACAAATAATTGCGTGCCATGTTGTTTGTCATGTAATGGCAAGAAATCAGATTCCGAAGTTCTTAGTTGGTAC
AGAAAACAAAATTTTTATGATCCTAGAAGAGCTATGGCAATACGAGCATGGCTTAATGATGATTTAAAACTAGCGTCAGT
TCTTTTGAACTACTTAAAGTAA

Upstream 100 bases:

>100_bases
CTTATTTTATAAGAAACGAACTATTTACAAAGTATTATCTTCTCTGTTTCAATCAAACTTTAAAAAAACTGTTATTATCT
AAAAAATTATCAAGAACATT

Downstream 100 bases:

>100_bases
AATTAAATAATTAATTTATTAAAATCCCTAAAAATTTATTTTATCAAGCATAAAACTAACATCCCATTTTGGTAAATAAT
TATTTTGTTTTAAATTATTC

Product: HNH nuclease

Products: NA

Alternate protein names: HNH Nuclease; McrA/HNH Family Nuclease

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MHRQDAIYLDQLCPKISNKSWRESLHKLTKYKCIYCGKPSESLDHLHPMSQGGKSSTNNCVPCCLSCNGKKSDSEVLSWY
RKQNFYDPRRAMAIRAWLNDDLKLASVLLNYLK

Sequences:

>Translated_113_residues
MHRQDAIYLDQLCPKISNKSWRESLHKLTKYKCIYCGKPSESLDHLHPMSQGGKSSTNNCVPCCLSCNGKKSDSEVLSWY
RKQNFYDPRRAMAIRAWLNDDLKLASVLLNYLK
>Mature_113_residues
MHRQDAIYLDQLCPKISNKSWRESLHKLTKYKCIYCGKPSESLDHLHPMSQGGKSSTNNCVPCCLSCNGKKSDSEVLSWY
RKQNFYDPRRAMAIRAWLNDDLKLASVLLNYLK

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13084; Mature: 13084

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRQDAIYLDQLCPKISNKSWRESLHKLTKYKCIYCGKPSESLDHLHPMSQGGKSSTNNC
CCCCHHHHHHHHCHHCCCHHHHHHHHHHHHHCEEEECCCCHHHHHHCCCCCCCCCCCCCC
VPCCLSCNGKKSDSEVLSWYRKQNFYDPRRAMAIRAWLNDDLKLASVLLNYLK
CEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHC
>Mature Secondary Structure
MHRQDAIYLDQLCPKISNKSWRESLHKLTKYKCIYCGKPSESLDHLHPMSQGGKSSTNNC
CCCCHHHHHHHHCHHCCCHHHHHHHHHHHHHCEEEECCCCHHHHHHCCCCCCCCCCCCCC
VPCCLSCNGKKSDSEVLSWYRKQNFYDPRRAMAIRAWLNDDLKLASVLLNYLK
CEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA