Click here to switch to the map view.

The map label for this gene is 78779301

Identifier: 78779301

GI number: 78779301

Start: 849724

End: 850212

Strand: Direct

Name: 78779301

Synonym: PMT9312_0917

Alternate gene names: NA

Gene position: 849724-850212 (Clockwise)

Preceding gene: 78779299

Following gene: 78779302

Centisome position: 49.71

GC content: 35.17

Gene sequence:

>489_bases
ATGACATTAAATCTAGAAGCAAAAAAAATCTTATTAAGAAAAATACCTCACGGATTATTTATTTGTGGCGTTAGAGACGA
GGTTAAAAATGAAGTGAATGGATTTACTGCAAGTTGGGTGACTCAAGGTTCCTTCACCCCACCATTAGTTGTAATGGCTG
TTAGAGCAGAGGGTTCAAGTCATGAAATAATAAAGTCCACCAATAAGTTCTCATTAAATGTTCTAAAAAGTGATCAAAAG
GATCTAGCAGCTGTTTTCTTTAAACCTCAAAAAGCATTAGGAGGTAGATTTGAATCTGTTGAATTTAAATTAGGTGAGCT
TGGATTGCCTATTTTAGTTGATAGTGTTGGTGGGGTTGAATGTAATGTTGTTGGAAGTGTTATGCATGGAGATCATACCG
TTTTTGTAGGAGAGGTTCAATCTGCTTATCTGAATAATGATGTTGACTCACTAAATTTATCTTCAACTGGCTGGAATTAT
GGAGGGTAA

Upstream 100 bases:

>100_bases
TTTGTTAAAGGATCAAATGTACCTGGATAAAGAATTTTCATGAATTTATTATGATCGAATAAGAAATTTAGTTAAAATAA
GATTATTAGATAAATCAATT

Downstream 100 bases:

>100_bases
TCATTATAAATGAGTAATTCCTCTATCGAAAAAATAGATAACAAATATAATTTTAAAATTGAATATAAATTAATTAATAA
TAAGGAATTATTAAAATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTLNLEAKKILLRKIPHGLFICGVRDEVKNEVNGFTASWVTQGSFTPPLVVMAVRAEGSSHEIIKSTNKFSLNVLKSDQK
DLAAVFFKPQKALGGRFESVEFKLGELGLPILVDSVGGVECNVVGSVMHGDHTVFVGEVQSAYLNNDVDSLNLSSTGWNY
GG

Sequences:

>Translated_162_residues
MTLNLEAKKILLRKIPHGLFICGVRDEVKNEVNGFTASWVTQGSFTPPLVVMAVRAEGSSHEIIKSTNKFSLNVLKSDQK
DLAAVFFKPQKALGGRFESVEFKLGELGLPILVDSVGGVECNVVGSVMHGDHTVFVGEVQSAYLNNDVDSLNLSSTGWNY
GG
>Mature_161_residues
TLNLEAKKILLRKIPHGLFICGVRDEVKNEVNGFTASWVTQGSFTPPLVVMAVRAEGSSHEIIKSTNKFSLNVLKSDQKD
LAAVFFKPQKALGGRFESVEFKLGELGLPILVDSVGGVECNVVGSVMHGDHTVFVGEVQSAYLNNDVDSLNLSSTGWNYG
G

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 17511; Mature: 17380

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNLEAKKILLRKIPHGLFICGVRDEVKNEVNGFTASWVTQGSFTPPLVVMAVRAEGSS
CCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHCCEEEEEEECCCCCCCEEEEEEECCCCC
HEIIKSTNKFSLNVLKSDQKDLAAVFFKPQKALGGRFESVEFKLGELGLPILVDSVGGVE
CCEEECCCCEEEEEECCCCCCEEEEEECCCHHHCCCEEEEEEEECCCCCEEEEECCCCEE
CNVVGSVMHGDHTVFVGEVQSAYLNNDVDSLNLSSTGWNYGG
EEEEEEEECCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLNLEAKKILLRKIPHGLFICGVRDEVKNEVNGFTASWVTQGSFTPPLVVMAVRAEGSS
CCCCHHHHHHHHHCCCCEEEEECHHHHHHHHCCEEEEEEECCCCCCCEEEEEEECCCCC
HEIIKSTNKFSLNVLKSDQKDLAAVFFKPQKALGGRFESVEFKLGELGLPILVDSVGGVE
CCEEECCCCEEEEEECCCCCCEEEEEECCCHHHCCCEEEEEEEECCCCCEEEEECCCCEE
CNVVGSVMHGDHTVFVGEVQSAYLNNDVDSLNLSSTGWNYGG
EEEEEEEECCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]