| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is pyk2 [H]
Identifier: 78779272
GI number: 78779272
Start: 820354
End: 822147
Strand: Reverse
Name: pyk2 [H]
Synonym: PMT9312_0888
Alternate gene names: 78779272
Gene position: 822147-820354 (Counterclockwise)
Preceding gene: 78779274
Following gene: 78779271
Centisome position: 48.1
GC content: 33.22
Gene sequence:
>1794_bases ATGTCGAATATTGATTTAAAAAGAAGAACAAAAATAGTAGCAACTATTGGACCTGCAACTCAGTCTGAAGAGATAATTAC AAATTTAATTAAAGCAGGAGTAACAACATTCAGATTAAATTTCTCACATGGAGATCATAATGATCACGCTGAGAGAATTA AAACTATAAGGGAGGTTTCACAAAAGCTAGATATTGATATTGGTATTCTGCAAGATCTTCAAGGACCTAAAATTAGGTTA GGACGATTCAAGGATGGTCCAGTAAAAGTAAAAAAAGGGGATAAATTTACACTAACCTCCAATGAAGTTGAATGTTCAAA TACTATTGCGAATGTAACTTACGAGAATCTTTCTCAAGAAGTTAGTGAAGGGAAAAGAATACTATTAGATGATGGTAAAA TTGAAATGATTGTTGAAAAAGTAGATACTAAAGCTAATCTTTTAGAATGTTTGGTTACTGTAGGTGGTGTTTTATCAAAT AATAAAGGTGTAAATTTCCCAGATGTTCAATTATCTGTAAAAGCATTAACAGAAAAAGATAAAGAGGATTTAAAATTTGG TTTATCTGAGGGAGTTGACTGGATAGCTCTGAGTTTCGTAAGAAATCCTTCCGATATTAATGAAATTAAAGATTTAATAA ACAAAAATGGTCATTCAACTCCAGTAGTTGCAAAAATAGAAAAATTTGAAGCAATAGATCAAATTGATGCTGTATTACCT TTATGTGATGGAGTTATGGTTGCAAGAGGGGATTTGGGAGTAGAAATGCCTGCTGAAGAAGTTCCACTTTTACAAAAGGA TTTAATAAGAAAAGCTAATTCATTAGGTATACCAATAATTACCGCGACTCAAATGCTTGATTCCATGGCTTCTAATCCAA GACCGACTAGAGCCGAAGTAAGCGATGTCGCCAATGCAATACTGGATGGAACAGATGCAGTAATGCTTTCAAACGAAACT GCCGTTGGCGATTATCCTGTAGAGGCAGTACAAACGATGGCAACAATAGCAAGAAGAATTGAGAGGGATTATCCTCTTAA AGCTATTGAGAGCCACTTACCTAGCACGATACCAAATGCTATTAGTGGAGCTGTAAGTAATATAGCTAGACAACTAGATG CAGGAGCAATAATTCCTTTAACAAAATCAGGTTCTACTGCTCGAAATGTAAGTAAATTTAGACCGCCAACTCCTATTTTG GCAACTACAACTGAAAGGAGTGTAGCGAGAAGACTTCAACTTGTTTGGGGAGTCACCCCGATAGTAGTAAATAATGATGA AAGAACAGCAAAAACATTTAGTTTAGCTATGCAAATTGCTCAAGAAATGGGAATATTAAAACAAGGAGATTTAGTCGTTC AAACTGCAGGTACACTAACTGGTATAAGTGGCTCTACAGATTTAATAAAAGTTGGTTTAGTAAGGAAGATACTTTCAAGA GGGATCTCAATAGGTGAAATTGGAGTTACAGGTAAAGCAAGAAAAATAAATACTAAACTTGATTTGTCATTAATTTGCCC TGGCGAAATTTTATTTGTTAATAAAGAATTATTGGAAAATGTTCCATTGAGCAAAAATATTGCAGGTATTGTTACGAACC AAAATGTAGATGATGTTTATGCCTTTTTTAACAAAAACAATAAGAAGATTTCTACAATCTGTAATGTAGAAAACATTGAT AATAATCAAATTATTAATGGTGATCTAGTAACTTTACAGCTTAACGAAGGTGTAATTTATATGGGACAAATTGAAGATGA TGAAGAAGCTATAGATAAATATAAATATGTCTAG
Upstream 100 bases:
>100_bases TGTTTCTCTTGCTTTTTTCTGATAAGTTTTAAAATCCATAACTTAAACAACTAACTTTGGGTATGGTAAATTTATTTATA TCTAGCAATATTATTTATAT
Downstream 100 bases:
>100_bases GAATATCTCAATAAAGGAAGCCCTAGGCATGGCGACCAAAACATTAGTCTCAAACAAATTAAGAAGTTCGTTGACTATGC TAGGAATAATTATAGGAAAT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK 2 [H]
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MSNIDLKRRTKIVATIGPATQSEEIITNLIKAGVTTFRLNFSHGDHNDHAERIKTIREVSQKLDIDIGILQDLQGPKIRL GRFKDGPVKVKKGDKFTLTSNEVECSNTIANVTYENLSQEVSEGKRILLDDGKIEMIVEKVDTKANLLECLVTVGGVLSN NKGVNFPDVQLSVKALTEKDKEDLKFGLSEGVDWIALSFVRNPSDINEIKDLINKNGHSTPVVAKIEKFEAIDQIDAVLP LCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSMASNPRPTRAEVSDVANAILDGTDAVMLSNET AVGDYPVEAVQTMATIARRIERDYPLKAIESHLPSTIPNAISGAVSNIARQLDAGAIIPLTKSGSTARNVSKFRPPTPIL ATTTERSVARRLQLVWGVTPIVVNNDERTAKTFSLAMQIAQEMGILKQGDLVVQTAGTLTGISGSTDLIKVGLVRKILSR GISIGEIGVTGKARKINTKLDLSLICPGEILFVNKELLENVPLSKNIAGIVTNQNVDDVYAFFNKNNKKISTICNVENID NNQIINGDLVTLQLNEGVIYMGQIEDDEEAIDKYKYV
Sequences:
>Translated_597_residues MSNIDLKRRTKIVATIGPATQSEEIITNLIKAGVTTFRLNFSHGDHNDHAERIKTIREVSQKLDIDIGILQDLQGPKIRL GRFKDGPVKVKKGDKFTLTSNEVECSNTIANVTYENLSQEVSEGKRILLDDGKIEMIVEKVDTKANLLECLVTVGGVLSN NKGVNFPDVQLSVKALTEKDKEDLKFGLSEGVDWIALSFVRNPSDINEIKDLINKNGHSTPVVAKIEKFEAIDQIDAVLP LCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSMASNPRPTRAEVSDVANAILDGTDAVMLSNET AVGDYPVEAVQTMATIARRIERDYPLKAIESHLPSTIPNAISGAVSNIARQLDAGAIIPLTKSGSTARNVSKFRPPTPIL ATTTERSVARRLQLVWGVTPIVVNNDERTAKTFSLAMQIAQEMGILKQGDLVVQTAGTLTGISGSTDLIKVGLVRKILSR GISIGEIGVTGKARKINTKLDLSLICPGEILFVNKELLENVPLSKNIAGIVTNQNVDDVYAFFNKNNKKISTICNVENID NNQIINGDLVTLQLNEGVIYMGQIEDDEEAIDKYKYV >Mature_596_residues SNIDLKRRTKIVATIGPATQSEEIITNLIKAGVTTFRLNFSHGDHNDHAERIKTIREVSQKLDIDIGILQDLQGPKIRLG RFKDGPVKVKKGDKFTLTSNEVECSNTIANVTYENLSQEVSEGKRILLDDGKIEMIVEKVDTKANLLECLVTVGGVLSNN KGVNFPDVQLSVKALTEKDKEDLKFGLSEGVDWIALSFVRNPSDINEIKDLINKNGHSTPVVAKIEKFEAIDQIDAVLPL CDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSMASNPRPTRAEVSDVANAILDGTDAVMLSNETA VGDYPVEAVQTMATIARRIERDYPLKAIESHLPSTIPNAISGAVSNIARQLDAGAIIPLTKSGSTARNVSKFRPPTPILA TTTERSVARRLQLVWGVTPIVVNNDERTAKTFSLAMQIAQEMGILKQGDLVVQTAGTLTGISGSTDLIKVGLVRKILSRG ISIGEIGVTGKARKINTKLDLSLICPGEILFVNKELLENVPLSKNIAGIVTNQNVDDVYAFFNKNNKKISTICNVENIDN NQIINGDLVTLQLNEGVIYMGQIEDDEEAIDKYKYV
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=488, Percent_Identity=39.9590163934426, Blast_Score=334, Evalue=1e-91, Organism=Homo sapiens, GI33286422, Length=489, Percent_Identity=39.8773006134969, Blast_Score=331, Evalue=1e-90, Organism=Homo sapiens, GI33286420, Length=489, Percent_Identity=39.8773006134969, Blast_Score=331, Evalue=1e-90, Organism=Homo sapiens, GI10835121, Length=490, Percent_Identity=39.5918367346939, Blast_Score=325, Evalue=6e-89, Organism=Homo sapiens, GI32967597, Length=490, Percent_Identity=39.5918367346939, Blast_Score=325, Evalue=9e-89, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=40.1384083044983, Blast_Score=203, Evalue=4e-52, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=40.1384083044983, Blast_Score=203, Evalue=4e-52, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=37.1308016877637, Blast_Score=152, Evalue=1e-36, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=37.1308016877637, Blast_Score=152, Evalue=1e-36, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=36.1111111111111, Blast_Score=131, Evalue=2e-30, Organism=Escherichia coli, GI1787965, Length=469, Percent_Identity=43.7100213219616, Blast_Score=357, Evalue=2e-99, Organism=Escherichia coli, GI1788160, Length=473, Percent_Identity=42.2832980972516, Blast_Score=322, Evalue=5e-89, Organism=Caenorhabditis elegans, GI17544584, Length=485, Percent_Identity=38.5567010309278, Blast_Score=325, Evalue=6e-89, Organism=Caenorhabditis elegans, GI71984413, Length=487, Percent_Identity=40.2464065708419, Blast_Score=304, Evalue=7e-83, Organism=Caenorhabditis elegans, GI17506829, Length=487, Percent_Identity=40.2464065708419, Blast_Score=304, Evalue=9e-83, Organism=Caenorhabditis elegans, GI71984406, Length=487, Percent_Identity=40.2464065708419, Blast_Score=303, Evalue=1e-82, Organism=Caenorhabditis elegans, GI17506831, Length=487, Percent_Identity=40.2464065708419, Blast_Score=303, Evalue=1e-82, Organism=Saccharomyces cerevisiae, GI6319279, Length=486, Percent_Identity=39.3004115226337, Blast_Score=304, Evalue=3e-83, Organism=Saccharomyces cerevisiae, GI6324923, Length=478, Percent_Identity=38.4937238493724, Blast_Score=295, Evalue=1e-80, Organism=Drosophila melanogaster, GI24648964, Length=491, Percent_Identity=39.5112016293279, Blast_Score=316, Evalue=3e-86, Organism=Drosophila melanogaster, GI28571814, Length=491, Percent_Identity=39.5112016293279, Blast_Score=315, Evalue=5e-86, Organism=Drosophila melanogaster, GI24648966, Length=408, Percent_Identity=40.4411764705882, Blast_Score=286, Evalue=2e-77, Organism=Drosophila melanogaster, GI24581235, Length=486, Percent_Identity=33.3333333333333, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24646914, Length=329, Percent_Identity=37.6899696048632, Blast_Score=190, Evalue=3e-48,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 65036; Mature: 64904
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIDLKRRTKIVATIGPATQSEEIITNLIKAGVTTFRLNFSHGDHNDHAERIKTIREVS CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHH QKLDIDIGILQDLQGPKIRLGRFKDGPVKVKKGDKFTLTSNEVECSNTIANVTYENLSQE HHCCCCEEHHHCCCCCCEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHH VSEGKRILLDDGKIEMIVEKVDTKANLLECLVTVGGVLSNNKGVNFPDVQLSVKALTEKD HHCCCEEEEECCCEEEEEEHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHCCC KEDLKFGLSEGVDWIALSFVRNPSDINEIKDLINKNGHSTPVVAKIEKFEAIDQIDAVLP HHHHHHHHHCCCCEEEHEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSMASNPRPTRAEV HHCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHH SDVANAILDGTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPLKAIESHLPSTIPNA HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHH ISGAVSNIARQLDAGAIIPLTKSGSTARNVSKFRPPTPILATTTERSVARRLQLVWGVTP HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCE IVVNNDERTAKTFSLAMQIAQEMGILKQGDLVVQTAGTLTGISGSTDLIKVGLVRKILSR EEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHC GISIGEIGVTGKARKINTKLDLSLICPGEILFVNKELLENVPLSKNIAGIVTNQNVDDVY CCCEEEECCCCCCEEECCEEEEEEECCCEEEEEEHHHHHCCCCCCCCEEEEECCCHHHHH AFFNKNNKKISTICNVENIDNNQIINGDLVTLQLNEGVIYMGQIEDDEEAIDKYKYV HHHCCCCCEEEEEECCCCCCCCEEECCEEEEEEECCCEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure SNIDLKRRTKIVATIGPATQSEEIITNLIKAGVTTFRLNFSHGDHNDHAERIKTIREVS CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHH QKLDIDIGILQDLQGPKIRLGRFKDGPVKVKKGDKFTLTSNEVECSNTIANVTYENLSQE HHCCCCEEHHHCCCCCCEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHH VSEGKRILLDDGKIEMIVEKVDTKANLLECLVTVGGVLSNNKGVNFPDVQLSVKALTEKD HHCCCEEEEECCCEEEEEEHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHCCC KEDLKFGLSEGVDWIALSFVRNPSDINEIKDLINKNGHSTPVVAKIEKFEAIDQIDAVLP HHHHHHHHHCCCCEEEHEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSMASNPRPTRAEV HHCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHH SDVANAILDGTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPLKAIESHLPSTIPNA HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHH ISGAVSNIARQLDAGAIIPLTKSGSTARNVSKFRPPTPILATTTERSVARRLQLVWGVTP HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCE IVVNNDERTAKTFSLAMQIAQEMGILKQGDLVVQTAGTLTGISGSTDLIKVGLVRKILSR EEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHC GISIGEIGVTGKARKINTKLDLSLICPGEILFVNKELLENVPLSKNIAGIVTNQNVDDVY CCCEEEECCCCCCEEECCEEEEEEECCCEEEEEEHHHHHCCCCCCCCEEEEECCCHHHHH AFFNKNNKKISTICNVENIDNNQIINGDLVTLQLNEGVIYMGQIEDDEEAIDKYKYV HHHCCCCCEEEEEECCCCCCCCEEECCEEEEEEECCCEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]