| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is pucG [H]
Identifier: 78779265
GI number: 78779265
Start: 813349
End: 814533
Strand: Direct
Name: pucG [H]
Synonym: PMT9312_0881
Alternate gene names: 78779265
Gene position: 813349-814533 (Clockwise)
Preceding gene: 78779261
Following gene: 78779267
Centisome position: 47.59
GC content: 34.6
Gene sequence:
>1185_bases TTGACAGAGGCAAAACTTATTTCTGCTTTAAATGAAGAGAATTTATCTCATTTCTCAAAGACTTATGTTCCCTCTAGACT TTTATTAGGTCCTGGTCCTTCAAACGCACATCCAGAAGTTTTAAACGCTCTTTCCCTAAATCCAATCGGTCATTTAGATG AAGCATATATTTCATTAATGTCTGATGTTCAAAAACTTCTACGATATACCTGGCAATGCAATAATCGTCTTACTCTCCCA ATGAGTGGTACTGGAAGTGCAGCTATGGAAGCTTCAATAGCGAATTTTATAGAGGAAGGAGAAACAATTCTTATCGCTAA AAAAGGATATTTTGGAGACAGACTTGTTGATATGGCTACTAGATATAAAGCAGAAGTATCTGTTATGGAAAAACCTTGGG GTGAATCTTTTTCTTATGAAGAAATCAAGTATGAAATAGAGACTAAAAAACCAGCTATATTTGCTATTGTTCATGCTGAA ACCTCTAGTGGGGTTTTACAACCTCTTGATGGAATTGGTGATGTATGTAGAAAAAATAACTCCTTGTTTTTAGTTGACGC AGTTACTTCCCTTGGCGCTTTAGAACTATTGATAGATGAATGGAAAATAGATTTAGCGTATAGTTGTAGCCAGAAAGGAT TAAGTTGCCCGCCTGGATTAAGTCCTTTTACAATGAATGAGAGAGCTGAAGAAAAACTAAGTTCAAGAAAAACAAAAGTC CCTAACTGGTATTTAGATTTATCTCTTTTAAATAAATATTGGGGTTCAGATCGTGTTTACCATCATACCGCCCCTGTAAA TATGAATTTTGCTATTAGAGAGGGTTTACGATTAATTGCAAATGAAGGTTTAGAGAATGTTTGGAATAGGCATAATACTA ATGCAAGGAAACTGTGGAATGGTTTAGAAAGTTTAGGCATGGAATTACATGTATCAAAGGATTATCGATTGCCAACTCTT ACAACAGTTAAGATTCCACCAGCAGTTGATGGAGATGGTTTTAGAAATCATCTTTTAAGAAACTTTGGAATAGAAATAGG AAATGGACTTGGAGAATTGTCAGGTAAGGTATGGCGTATAGGATTAATGGGCTTTAACTCAAGTGAAGAGAATGTCGACA GATTATTAAACCTATTTGATACTGAGTTAAAGAAATATTCTATTTTTGAGTCCTCAACTTTTTAA
Upstream 100 bases:
>100_bases TAATTGTTTACCTAAATATTTAAATTGAATGAATTTCTTTAAATAAATCTCGCTTATGTGGCGATATTAGTTTAATTTAA AAGTAATTGAATGTAATGCT
Downstream 100 bases:
>100_bases ACCATAATTGTAAAATTTGACTGCATTCTTCTTCTAAGATACCCCCTACAATTTCCATCTTGTGATGAGAACTTTTATGC TTTGATAAGTCAATTGATCC
Product: serine:pyruvate/alanine:glyoxylate aminotransferase
Products: pyruvate; glycine
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MTEAKLISALNEENLSHFSKTYVPSRLLLGPGPSNAHPEVLNALSLNPIGHLDEAYISLMSDVQKLLRYTWQCNNRLTLP MSGTGSAAMEASIANFIEEGETILIAKKGYFGDRLVDMATRYKAEVSVMEKPWGESFSYEEIKYEIETKKPAIFAIVHAE TSSGVLQPLDGIGDVCRKNNSLFLVDAVTSLGALELLIDEWKIDLAYSCSQKGLSCPPGLSPFTMNERAEEKLSSRKTKV PNWYLDLSLLNKYWGSDRVYHHTAPVNMNFAIREGLRLIANEGLENVWNRHNTNARKLWNGLESLGMELHVSKDYRLPTL TTVKIPPAVDGDGFRNHLLRNFGIEIGNGLGELSGKVWRIGLMGFNSSEENVDRLLNLFDTELKKYSIFESSTF
Sequences:
>Translated_394_residues MTEAKLISALNEENLSHFSKTYVPSRLLLGPGPSNAHPEVLNALSLNPIGHLDEAYISLMSDVQKLLRYTWQCNNRLTLP MSGTGSAAMEASIANFIEEGETILIAKKGYFGDRLVDMATRYKAEVSVMEKPWGESFSYEEIKYEIETKKPAIFAIVHAE TSSGVLQPLDGIGDVCRKNNSLFLVDAVTSLGALELLIDEWKIDLAYSCSQKGLSCPPGLSPFTMNERAEEKLSSRKTKV PNWYLDLSLLNKYWGSDRVYHHTAPVNMNFAIREGLRLIANEGLENVWNRHNTNARKLWNGLESLGMELHVSKDYRLPTL TTVKIPPAVDGDGFRNHLLRNFGIEIGNGLGELSGKVWRIGLMGFNSSEENVDRLLNLFDTELKKYSIFESSTF >Mature_393_residues TEAKLISALNEENLSHFSKTYVPSRLLLGPGPSNAHPEVLNALSLNPIGHLDEAYISLMSDVQKLLRYTWQCNNRLTLPM SGTGSAAMEASIANFIEEGETILIAKKGYFGDRLVDMATRYKAEVSVMEKPWGESFSYEEIKYEIETKKPAIFAIVHAET SSGVLQPLDGIGDVCRKNNSLFLVDAVTSLGALELLIDEWKIDLAYSCSQKGLSCPPGLSPFTMNERAEEKLSSRKTKVP NWYLDLSLLNKYWGSDRVYHHTAPVNMNFAIREGLRLIANEGLENVWNRHNTNARKLWNGLESLGMELHVSKDYRLPTLT TVKIPPAVDGDGFRNHLLRNFGIEIGNGLGELSGKVWRIGLMGFNSSEENVDRLLNLFDTELKKYSIFESSTF
Specific function: Could encode ureidoglycolase or L-alanine:glyoxylate aminotransferase, or perhaps both activities [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=367, Percent_Identity=41.9618528610354, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI17536281, Length=369, Percent_Identity=39.2953929539295, Blast_Score=294, Evalue=6e-80, Organism=Saccharomyces cerevisiae, GI6321079, Length=373, Percent_Identity=27.0777479892761, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI17530823, Length=368, Percent_Identity=39.4021739130435, Blast_Score=300, Evalue=1e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.44
Molecular weight: Translated: 44127; Mature: 43996
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAKLISALNEENLSHFSKTYVPSRLLLGPGPSNAHPEVLNALSLNPIGHLDEAYISLM CCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHH SDVQKLLRYTWQCNNRLTLPMSGTGSAAMEASIANFIEEGETILIAKKGYFGDRLVDMAT HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH RYKAEVSVMEKPWGESFSYEEIKYEIETKKPAIFAIVHAETSSGVLQPLDGIGDVCRKNN HHHHHHHHHCCCCCCCCCHHHEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCC SLFLVDAVTSLGALELLIDEWKIDLAYSCSQKGLSCPPGLSPFTMNERAEEKLSSRKTKV CEEEEECHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC PNWYLDLSLLNKYWGSDRVYHHTAPVNMNFAIREGLRLIANEGLENVWNRHNTNARKLWN CCEEEEHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHH GLESLGMELHVSKDYRLPTLTTVKIPPAVDGDGFRNHLLRNFGIEIGNGLGELSGKVWRI HHHHCCEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHCCCHHHCCCCEEEE GLMGFNSSEENVDRLLNLFDTELKKYSIFESSTF EEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure TEAKLISALNEENLSHFSKTYVPSRLLLGPGPSNAHPEVLNALSLNPIGHLDEAYISLM CHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHH SDVQKLLRYTWQCNNRLTLPMSGTGSAAMEASIANFIEEGETILIAKKGYFGDRLVDMAT HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH RYKAEVSVMEKPWGESFSYEEIKYEIETKKPAIFAIVHAETSSGVLQPLDGIGDVCRKNN HHHHHHHHHCCCCCCCCCHHHEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCC SLFLVDAVTSLGALELLIDEWKIDLAYSCSQKGLSCPPGLSPFTMNERAEEKLSSRKTKV CEEEEECHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC PNWYLDLSLLNKYWGSDRVYHHTAPVNMNFAIREGLRLIANEGLENVWNRHNTNARKLWN CCEEEEHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHH GLESLGMELHVSKDYRLPTLTTVKIPPAVDGDGFRNHLLRNFGIEIGNGLGELSGKVWRI HHHHCCEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHCCCHHHCCCCEEEE GLMGFNSSEENVDRLLNLFDTELKKYSIFESSTF EEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-alanine; glyoxylate
Specific reaction: L-alanine + glyoxylate = pyruvate + glycine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]