| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is metK [H]
Identifier: 78778702
GI number: 78778702
Start: 302296
End: 303537
Strand: Reverse
Name: metK [H]
Synonym: PMT9312_0317
Alternate gene names: 78778702
Gene position: 303537-302296 (Counterclockwise)
Preceding gene: 78778703
Following gene: 78778701
Centisome position: 17.76
GC content: 36.71
Gene sequence:
>1242_bases ATGAGTGATTTCATTTTCACTTCTGAATCCGTTACTGAAGGTCATCCTGACAAAATATGTGATCAAATTAGTGACGCAGT TTTAGATGCTTTATTAACAGAAGATCCAGAAAGCAGAGTTGCATGCGAAACTGTCGTTAACACTGGTCTATGTCTACTTA CTGGAGAAATAACTTCAAAAGCGAAAGTCGATTATATAAAACTTGTTAGAAATGTAATTAAAGAAATTGGATATGAAGGC TATAGAGCAGGTGGTTTTGACGCAAATAGTTGTGCTGTTTTAGTAGCACTTGACGAGCAATCACCAGATATTTCACAAGG AGTAAACTACGCAGATGATGTTAACGATGATTTAGAAGATAATACCGGAGCTGGTGACCAAGGCATAATGTTCGGCTATG CATGCGATGAGACGCCTGAATTAATGCCATTACCAATTAGCTTGGCTCATAGATTAGCCATTCAACTTGCCAAAGTGAGA CATGAAGAAGTCCTTAATTATCTACTCCCAGATGGTAAAACGCAAGTAAGCATTGATTACGAAAAAGGGTTACCAGTCTC TATTAATACGATTTTAATTTCAACTCAACATAATCCTGAGATTGATGGAATAACAAATGAAGAAGAAATTCGTCAAAGAA TAAAAGAAGATTTATGGACGCATGTTGTAATTCCTGCTACTGAAGATTTAAAAATCAAACCAAACATTAGCAAAACAAGA TTTCTAGTAAACCCGACGGGCAAATTTGTAGTAGGCGGTCCTCAAGGAGATGCTGGGCTCACTGGTAGAAAAATTATTGT AGATACTTATGGTGGATATGCAAGGCACGGAGGTGGTGCATTTTCTGGTAAAGATCCCACAAAAGTAGATAGATCAGCCG CTTATGCAGCACGTTATGTAGCTAAAAGCATAGTTAAGGCAAAATTGGCAAAAAAAGCAGAAGTACAATTAAGTTATGCA ATTGGAGTAGCAAAACCAATTTCCATTCTGGTGGAAACTTTTGATACTGGTGTTATTTCACAAGCTAATTTGACTGAGCT AATTAAAGAGCACTTTGATTTAAGACCCGCAGCAATAATAAAAGAATTTAACTTAAGAAATTTACCAAAAAAAATGGGGG GAAATTTTTTCAGAAAGACTGCATCCTATGGACATTTTGGCAGGCGAGATCTCCAGCTCCCTTGGGAAAATGTCGAAGAA AAAGCAGCCAAATTAGAAGAGGCATCCAAAATATTTTTATAA
Upstream 100 bases:
>100_bases TACAAACAAGTTCTTACAGGACAAATTTTTATTTACAATCATTGATTACAAACAACAGTTTAACTTAGGATAAGCCTTAG TCTTAAAAAATTATATTTAA
Downstream 100 bases:
>100_bases GGTATTGCTTCTATGCCTGATAATTATTATGGAGGGTTAGATTTTGGAACTAGTGGTGCGAGAATATCTATAATTGATCT TTATAAAGAATCAGTATATT
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEG YRAGGFDANSCAVLVALDEQSPDISQGVNYADDVNDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVR HEEVLNYLLPDGKTQVSIDYEKGLPVSINTILISTQHNPEIDGITNEEEIRQRIKEDLWTHVVIPATEDLKIKPNISKTR FLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKSIVKAKLAKKAEVQLSYA IGVAKPISILVETFDTGVISQANLTELIKEHFDLRPAAIIKEFNLRNLPKKMGGNFFRKTASYGHFGRRDLQLPWENVEE KAAKLEEASKIFL
Sequences:
>Translated_413_residues MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEG YRAGGFDANSCAVLVALDEQSPDISQGVNYADDVNDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVR HEEVLNYLLPDGKTQVSIDYEKGLPVSINTILISTQHNPEIDGITNEEEIRQRIKEDLWTHVVIPATEDLKIKPNISKTR FLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKSIVKAKLAKKAEVQLSYA IGVAKPISILVETFDTGVISQANLTELIKEHFDLRPAAIIKEFNLRNLPKKMGGNFFRKTASYGHFGRRDLQLPWENVEE KAAKLEEASKIFL >Mature_412_residues SDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGY RAGGFDANSCAVLVALDEQSPDISQGVNYADDVNDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRH EEVLNYLLPDGKTQVSIDYEKGLPVSINTILISTQHNPEIDGITNEEEIRQRIKEDLWTHVVIPATEDLKIKPNISKTRF LVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKSIVKAKLAKKAEVQLSYAI GVAKPISILVETFDTGVISQANLTELIKEHFDLRPAAIIKEFNLRNLPKKMGGNFFRKTASYGHFGRRDLQLPWENVEEK AAKLEEASKIFL
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI4557737, Length=397, Percent_Identity=54.4080604534005, Blast_Score=389, Evalue=1e-108, Organism=Homo sapiens, GI5174529, Length=397, Percent_Identity=54.1561712846348, Blast_Score=388, Evalue=1e-108, Organism=Escherichia coli, GI1789311, Length=411, Percent_Identity=54.5012165450122, Blast_Score=424, Evalue=1e-120, Organism=Caenorhabditis elegans, GI25145633, Length=403, Percent_Identity=54.3424317617866, Blast_Score=393, Evalue=1e-110, Organism=Caenorhabditis elegans, GI17551082, Length=411, Percent_Identity=53.2846715328467, Blast_Score=390, Evalue=1e-109, Organism=Caenorhabditis elegans, GI17538498, Length=400, Percent_Identity=54, Blast_Score=388, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17538494, Length=414, Percent_Identity=52.4154589371981, Blast_Score=387, Evalue=1e-108, Organism=Caenorhabditis elegans, GI32565905, Length=414, Percent_Identity=45.8937198067633, Blast_Score=321, Evalue=4e-88, Organism=Caenorhabditis elegans, GI25145635, Length=357, Percent_Identity=51.5406162464986, Blast_Score=316, Evalue=1e-86, Organism=Caenorhabditis elegans, GI32565911, Length=354, Percent_Identity=51.1299435028249, Blast_Score=311, Evalue=4e-85, Organism=Caenorhabditis elegans, GI32565903, Length=354, Percent_Identity=46.6101694915254, Blast_Score=277, Evalue=7e-75, Organism=Caenorhabditis elegans, GI32565909, Length=81, Percent_Identity=70.3703703703704, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI32565907, Length=39, Percent_Identity=76.9230769230769, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323209, Length=398, Percent_Identity=51.2562814070352, Blast_Score=384, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6320710, Length=407, Percent_Identity=50.8599508599509, Blast_Score=382, Evalue=1e-107, Organism=Drosophila melanogaster, GI45552159, Length=397, Percent_Identity=52.896725440806, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580529, Length=397, Percent_Identity=52.896725440806, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580537, Length=397, Percent_Identity=52.896725440806, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580533, Length=397, Percent_Identity=52.896725440806, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580535, Length=397, Percent_Identity=52.896725440806, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580531, Length=397, Percent_Identity=52.896725440806, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580527, Length=397, Percent_Identity=52.6448362720403, Blast_Score=358, Evalue=3e-99, Organism=Drosophila melanogaster, GI24580525, Length=397, Percent_Identity=52.6448362720403, Blast_Score=358, Evalue=3e-99, Organism=Drosophila melanogaster, GI24580541, Length=384, Percent_Identity=51.5625, Blast_Score=335, Evalue=3e-92, Organism=Drosophila melanogaster, GI24580539, Length=124, Percent_Identity=58.0645161290323, Blast_Score=139, Evalue=3e-33,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 45271; Mature: 45140
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSK CCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCCC AKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVNYADDVNDDLED HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCC NTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRHEEVLNYLLPDGKTQVSIDY CCCCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE EKGLPVSINTILISTQHNPEIDGITNEEEIRQRIKEDLWTHVVIPATEDLKIKPNISKTR CCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCEECCCCCCEE FLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYV EEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AKSIVKAKLAKKAEVQLSYAIGVAKPISILVETFDTGVISQANLTELIKEHFDLRPAAII HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHH KEFNLRNLPKKMGGNFFRKTASYGHFGRRDLQLPWENVEEKAAKLEEASKIFL HHCCHHCCCHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSK CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCCC AKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVNYADDVNDDLED HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCC NTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRHEEVLNYLLPDGKTQVSIDY CCCCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE EKGLPVSINTILISTQHNPEIDGITNEEEIRQRIKEDLWTHVVIPATEDLKIKPNISKTR CCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCEECCCCCCEE FLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYV EEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AKSIVKAKLAKKAEVQLSYAIGVAKPISILVETFDTGVISQANLTELIKEHFDLRPAAII HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHH KEFNLRNLPKKMGGNFFRKTASYGHFGRRDLQLPWENVEEKAAKLEEASKIFL HHCCHHCCCHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA