| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is ydeV [C]
Identifier: 78778701
GI number: 78778701
Start: 301054
End: 302283
Strand: Reverse
Name: ydeV [C]
Synonym: PMT9312_0316
Alternate gene names: 78778701
Gene position: 302283-301054 (Counterclockwise)
Preceding gene: 78778702
Following gene: 78778700
Centisome position: 17.69
GC content: 33.33
Gene sequence:
>1230_bases ATGCCTGATAATTATTATGGAGGGTTAGATTTTGGAACTAGTGGTGCGAGAATATCTATAATTGATCTTTATAAAGAATC AGTATATTCGGATTCAGTTACTTATCTGTATGGCTTTAAAAATCCAAATTCTTGGATCAATTCTTGTGAAAAGCTCTTAG ATAGTTTACCTATTGAGATTAAAAAGAACCTAAGTAAATTGGCTATATCTGGTACCTCAGGAACTTTAACAGCATTCGAT TTCAAAGGGGAGCCATTAGGGGAAGCTATACCATATGACCAAGCATGTAATGACCATCAAATCCTTCTTGAATCATTAAC TTCTGGAGAAGATCATTTACGAACTGCATACAGTAGTCTTGCAAAAGCATTAAACCTAGTTGAAAAATATGGGACTAATA TACTTTTAAGACATCAATCGGATTGGATAACTGGCTGGTTTTTAAAAGATTGGACTCATGGAGAAGAAGGTAATAATCTC AAACTTGGTTGGGATCTTCAAAAAGAATCTTGGCCAAAAAGCTTCCTTAATACTTCATGGAAAAAATGCTTGCCTCACAT AATAAAAAGTGGAAAAATTATTGGGCAAGTAAATTCTGATTTAGCAAAAAGATTTAACTTGAATAAAAAATTAAAATTAA TCTCTGGCACCACTGATTCTAATGCAGGTATATTAGCTGCAGGTTTAGGGAAAGAAGATGGTCTTACAGTTTTAGGAACA ACAATTGTTGTTAAGAAAATTATTGAAAACCCTATAAAGAAACAGGGCATTACAATCCATAGAGTAAACGACGATTGGAT ATGTGGAGGAGCATCAAATGCTGGATGCGGTATCTTGTCTAAGTTCTTTTCTGATTTAGAAATAAAGGAACTCAGTCGAC AAATTAATCCATCAAAAAACAGTTCTTTGGATCTTTTACCTCTTAATAGTAAAGGAGAGAGATTTCCTATTAATAATTCT GAATTAGAACCGATACTTGGTCCTAGACCAGTAAGCGACTCACTTTATTTACATGCATTATTTGAGGGGCTAGCTAAGAT CGAATTGAAAGGATGGGAAGAACTAGGCAAACTAACAGGTTCACTTCCAAAAAAAATTATTACTATTGGTGGAGGTTCAA AAAACCCTCAGTGGAGAAAAATAAGAGAAAAAATTATAAATATACCAATAGTTTCATGCAATAAAACCACTTCTTTTGGT ACTGCATTATTAGCGATTAATTCAAGGTAA
Upstream 100 bases:
>100_bases TTTTGGCAGGCGAGATCTCCAGCTCCCTTGGGAAAATGTCGAAGAAAAAGCAGCCAAATTAGAAGAGGCATCCAAAATAT TTTTATAAGGTATTGCTTCT
Downstream 100 bases:
>100_bases TAATTTTTGAATATTTGATAAAGATATAAAATTTTTAATGAAAAGGGTTTCACAAACTACACATCTTAATTTAGAGTGTA TAGGTTAGAGCCGGGATAGC
Product: carbohydrate kinase
Products: NA
Alternate protein names: Carbohydrate Kinase; Sugar Kinase; Xylulose Kinase; Carbohydrate Kinase FGGY-Like Protein; FGGY Family Sugar Kinase; Carbohydrate Kinase Fggy Family; Carbohydrate Kinase FGGY Family; Carbohydrate Kinase FGGY Family Protein; Carbohydrate Kinase Fggy; FGGY Family Carbohydrate Kinase N- Domain Protein; D-Xylulose Kinase; FGGY Family Carbohydrate Kinase; Carbohydrate Kinase Protein; Pentulose/Hexulose Kinase
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MPDNYYGGLDFGTSGARISIIDLYKESVYSDSVTYLYGFKNPNSWINSCEKLLDSLPIEIKKNLSKLAISGTSGTLTAFD FKGEPLGEAIPYDQACNDHQILLESLTSGEDHLRTAYSSLAKALNLVEKYGTNILLRHQSDWITGWFLKDWTHGEEGNNL KLGWDLQKESWPKSFLNTSWKKCLPHIIKSGKIIGQVNSDLAKRFNLNKKLKLISGTTDSNAGILAAGLGKEDGLTVLGT TIVVKKIIENPIKKQGITIHRVNDDWICGGASNAGCGILSKFFSDLEIKELSRQINPSKNSSLDLLPLNSKGERFPINNS ELEPILGPRPVSDSLYLHALFEGLAKIELKGWEELGKLTGSLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFG TALLAINSR
Sequences:
>Translated_409_residues MPDNYYGGLDFGTSGARISIIDLYKESVYSDSVTYLYGFKNPNSWINSCEKLLDSLPIEIKKNLSKLAISGTSGTLTAFD FKGEPLGEAIPYDQACNDHQILLESLTSGEDHLRTAYSSLAKALNLVEKYGTNILLRHQSDWITGWFLKDWTHGEEGNNL KLGWDLQKESWPKSFLNTSWKKCLPHIIKSGKIIGQVNSDLAKRFNLNKKLKLISGTTDSNAGILAAGLGKEDGLTVLGT TIVVKKIIENPIKKQGITIHRVNDDWICGGASNAGCGILSKFFSDLEIKELSRQINPSKNSSLDLLPLNSKGERFPINNS ELEPILGPRPVSDSLYLHALFEGLAKIELKGWEELGKLTGSLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFG TALLAINSR >Mature_408_residues PDNYYGGLDFGTSGARISIIDLYKESVYSDSVTYLYGFKNPNSWINSCEKLLDSLPIEIKKNLSKLAISGTSGTLTAFDF KGEPLGEAIPYDQACNDHQILLESLTSGEDHLRTAYSSLAKALNLVEKYGTNILLRHQSDWITGWFLKDWTHGEEGNNLK LGWDLQKESWPKSFLNTSWKKCLPHIIKSGKIIGQVNSDLAKRFNLNKKLKLISGTTDSNAGILAAGLGKEDGLTVLGTT IVVKKIIENPIKKQGITIHRVNDDWICGGASNAGCGILSKFFSDLEIKELSRQINPSKNSSLDLLPLNSKGERFPINNSE LEPILGPRPVSDSLYLHALFEGLAKIELKGWEELGKLTGSLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFGT ALLAINSR
Specific function: Unknown
COG id: COG1070
COG function: function code G; Sugar (pentulose and hexulose) kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45090; Mature: 44959
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNYYGGLDFGTSGARISIIDLYKESVYSDSVTYLYGFKNPNSWINSCEKLLDSLPIEI CCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHH KKNLSKLAISGTSGTLTAFDFKGEPLGEAIPYDQACNDHQILLESLTSGEDHLRTAYSSL HCCCHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH AKALNLVEKYGTNILLRHQSDWITGWFLKDWTHGEEGNNLKLGWDLQKESWPKSFLNTSW HHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCHHHCCHHHHCCCH KKCLPHIIKSGKIIGQVNSDLAKRFNLNKKLKLISGTTDSNAGILAAGLGKEDGLTVLGT HHHHHHHHHCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCEEEHHH TIVVKKIIENPIKKQGITIHRVNDDWICGGASNAGCGILSKFFSDLEIKELSRQINPSKN HHHHHHHHHCHHHHCCEEEEECCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCC SSLDLLPLNSKGERFPINNSELEPILGPRPVSDSLYLHALFEGLAKIELKGWEELGKLTG CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCHHHHHHHHC SLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFGTALLAINSR CCCCEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECC >Mature Secondary Structure PDNYYGGLDFGTSGARISIIDLYKESVYSDSVTYLYGFKNPNSWINSCEKLLDSLPIEI CCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHH KKNLSKLAISGTSGTLTAFDFKGEPLGEAIPYDQACNDHQILLESLTSGEDHLRTAYSSL HCCCHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH AKALNLVEKYGTNILLRHQSDWITGWFLKDWTHGEEGNNLKLGWDLQKESWPKSFLNTSW HHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCHHHCCHHHHCCCH KKCLPHIIKSGKIIGQVNSDLAKRFNLNKKLKLISGTTDSNAGILAAGLGKEDGLTVLGT HHHHHHHHHCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCEEEHHH TIVVKKIIENPIKKQGITIHRVNDDWICGGASNAGCGILSKFFSDLEIKELSRQINPSKN HHHHHHHHHCHHHHCCEEEEECCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCC SSLDLLPLNSKGERFPINNSELEPILGPRPVSDSLYLHALFEGLAKIELKGWEELGKLTG CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCHHHHHHHHC SLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFGTALLAINSR CCCCEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA