Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is ydeV [C]

Identifier: 78778701

GI number: 78778701

Start: 301054

End: 302283

Strand: Reverse

Name: ydeV [C]

Synonym: PMT9312_0316

Alternate gene names: 78778701

Gene position: 302283-301054 (Counterclockwise)

Preceding gene: 78778702

Following gene: 78778700

Centisome position: 17.69

GC content: 33.33

Gene sequence:

>1230_bases
ATGCCTGATAATTATTATGGAGGGTTAGATTTTGGAACTAGTGGTGCGAGAATATCTATAATTGATCTTTATAAAGAATC
AGTATATTCGGATTCAGTTACTTATCTGTATGGCTTTAAAAATCCAAATTCTTGGATCAATTCTTGTGAAAAGCTCTTAG
ATAGTTTACCTATTGAGATTAAAAAGAACCTAAGTAAATTGGCTATATCTGGTACCTCAGGAACTTTAACAGCATTCGAT
TTCAAAGGGGAGCCATTAGGGGAAGCTATACCATATGACCAAGCATGTAATGACCATCAAATCCTTCTTGAATCATTAAC
TTCTGGAGAAGATCATTTACGAACTGCATACAGTAGTCTTGCAAAAGCATTAAACCTAGTTGAAAAATATGGGACTAATA
TACTTTTAAGACATCAATCGGATTGGATAACTGGCTGGTTTTTAAAAGATTGGACTCATGGAGAAGAAGGTAATAATCTC
AAACTTGGTTGGGATCTTCAAAAAGAATCTTGGCCAAAAAGCTTCCTTAATACTTCATGGAAAAAATGCTTGCCTCACAT
AATAAAAAGTGGAAAAATTATTGGGCAAGTAAATTCTGATTTAGCAAAAAGATTTAACTTGAATAAAAAATTAAAATTAA
TCTCTGGCACCACTGATTCTAATGCAGGTATATTAGCTGCAGGTTTAGGGAAAGAAGATGGTCTTACAGTTTTAGGAACA
ACAATTGTTGTTAAGAAAATTATTGAAAACCCTATAAAGAAACAGGGCATTACAATCCATAGAGTAAACGACGATTGGAT
ATGTGGAGGAGCATCAAATGCTGGATGCGGTATCTTGTCTAAGTTCTTTTCTGATTTAGAAATAAAGGAACTCAGTCGAC
AAATTAATCCATCAAAAAACAGTTCTTTGGATCTTTTACCTCTTAATAGTAAAGGAGAGAGATTTCCTATTAATAATTCT
GAATTAGAACCGATACTTGGTCCTAGACCAGTAAGCGACTCACTTTATTTACATGCATTATTTGAGGGGCTAGCTAAGAT
CGAATTGAAAGGATGGGAAGAACTAGGCAAACTAACAGGTTCACTTCCAAAAAAAATTATTACTATTGGTGGAGGTTCAA
AAAACCCTCAGTGGAGAAAAATAAGAGAAAAAATTATAAATATACCAATAGTTTCATGCAATAAAACCACTTCTTTTGGT
ACTGCATTATTAGCGATTAATTCAAGGTAA

Upstream 100 bases:

>100_bases
TTTTGGCAGGCGAGATCTCCAGCTCCCTTGGGAAAATGTCGAAGAAAAAGCAGCCAAATTAGAAGAGGCATCCAAAATAT
TTTTATAAGGTATTGCTTCT

Downstream 100 bases:

>100_bases
TAATTTTTGAATATTTGATAAAGATATAAAATTTTTAATGAAAAGGGTTTCACAAACTACACATCTTAATTTAGAGTGTA
TAGGTTAGAGCCGGGATAGC

Product: carbohydrate kinase

Products: NA

Alternate protein names: Carbohydrate Kinase; Sugar Kinase; Xylulose Kinase; Carbohydrate Kinase FGGY-Like Protein; FGGY Family Sugar Kinase; Carbohydrate Kinase Fggy Family; Carbohydrate Kinase FGGY Family; Carbohydrate Kinase FGGY Family Protein; Carbohydrate Kinase Fggy; FGGY Family Carbohydrate Kinase N- Domain Protein; D-Xylulose Kinase; FGGY Family Carbohydrate Kinase; Carbohydrate Kinase Protein; Pentulose/Hexulose Kinase

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MPDNYYGGLDFGTSGARISIIDLYKESVYSDSVTYLYGFKNPNSWINSCEKLLDSLPIEIKKNLSKLAISGTSGTLTAFD
FKGEPLGEAIPYDQACNDHQILLESLTSGEDHLRTAYSSLAKALNLVEKYGTNILLRHQSDWITGWFLKDWTHGEEGNNL
KLGWDLQKESWPKSFLNTSWKKCLPHIIKSGKIIGQVNSDLAKRFNLNKKLKLISGTTDSNAGILAAGLGKEDGLTVLGT
TIVVKKIIENPIKKQGITIHRVNDDWICGGASNAGCGILSKFFSDLEIKELSRQINPSKNSSLDLLPLNSKGERFPINNS
ELEPILGPRPVSDSLYLHALFEGLAKIELKGWEELGKLTGSLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFG
TALLAINSR

Sequences:

>Translated_409_residues
MPDNYYGGLDFGTSGARISIIDLYKESVYSDSVTYLYGFKNPNSWINSCEKLLDSLPIEIKKNLSKLAISGTSGTLTAFD
FKGEPLGEAIPYDQACNDHQILLESLTSGEDHLRTAYSSLAKALNLVEKYGTNILLRHQSDWITGWFLKDWTHGEEGNNL
KLGWDLQKESWPKSFLNTSWKKCLPHIIKSGKIIGQVNSDLAKRFNLNKKLKLISGTTDSNAGILAAGLGKEDGLTVLGT
TIVVKKIIENPIKKQGITIHRVNDDWICGGASNAGCGILSKFFSDLEIKELSRQINPSKNSSLDLLPLNSKGERFPINNS
ELEPILGPRPVSDSLYLHALFEGLAKIELKGWEELGKLTGSLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFG
TALLAINSR
>Mature_408_residues
PDNYYGGLDFGTSGARISIIDLYKESVYSDSVTYLYGFKNPNSWINSCEKLLDSLPIEIKKNLSKLAISGTSGTLTAFDF
KGEPLGEAIPYDQACNDHQILLESLTSGEDHLRTAYSSLAKALNLVEKYGTNILLRHQSDWITGWFLKDWTHGEEGNNLK
LGWDLQKESWPKSFLNTSWKKCLPHIIKSGKIIGQVNSDLAKRFNLNKKLKLISGTTDSNAGILAAGLGKEDGLTVLGTT
IVVKKIIENPIKKQGITIHRVNDDWICGGASNAGCGILSKFFSDLEIKELSRQINPSKNSSLDLLPLNSKGERFPINNSE
LEPILGPRPVSDSLYLHALFEGLAKIELKGWEELGKLTGSLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFGT
ALLAINSR

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45090; Mature: 44959

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDNYYGGLDFGTSGARISIIDLYKESVYSDSVTYLYGFKNPNSWINSCEKLLDSLPIEI
CCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHH
KKNLSKLAISGTSGTLTAFDFKGEPLGEAIPYDQACNDHQILLESLTSGEDHLRTAYSSL
HCCCHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
AKALNLVEKYGTNILLRHQSDWITGWFLKDWTHGEEGNNLKLGWDLQKESWPKSFLNTSW
HHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCHHHCCHHHHCCCH
KKCLPHIIKSGKIIGQVNSDLAKRFNLNKKLKLISGTTDSNAGILAAGLGKEDGLTVLGT
HHHHHHHHHCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCEEEHHH
TIVVKKIIENPIKKQGITIHRVNDDWICGGASNAGCGILSKFFSDLEIKELSRQINPSKN
HHHHHHHHHCHHHHCCEEEEECCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCC
SSLDLLPLNSKGERFPINNSELEPILGPRPVSDSLYLHALFEGLAKIELKGWEELGKLTG
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCHHHHHHHHC
SLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFGTALLAINSR
CCCCEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure 
PDNYYGGLDFGTSGARISIIDLYKESVYSDSVTYLYGFKNPNSWINSCEKLLDSLPIEI
CCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHH
KKNLSKLAISGTSGTLTAFDFKGEPLGEAIPYDQACNDHQILLESLTSGEDHLRTAYSSL
HCCCHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
AKALNLVEKYGTNILLRHQSDWITGWFLKDWTHGEEGNNLKLGWDLQKESWPKSFLNTSW
HHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCHHHCCHHHHCCCH
KKCLPHIIKSGKIIGQVNSDLAKRFNLNKKLKLISGTTDSNAGILAAGLGKEDGLTVLGT
HHHHHHHHHCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCEEEHHH
TIVVKKIIENPIKKQGITIHRVNDDWICGGASNAGCGILSKFFSDLEIKELSRQINPSKN
HHHHHHHHHCHHHHCCEEEEECCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCC
SSLDLLPLNSKGERFPINNSELEPILGPRPVSDSLYLHALFEGLAKIELKGWEELGKLTG
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCHHHHHHHHC
SLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFGTALLAINSR
CCCCEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA