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The map label for this gene is 78484762

Identifier: 78484762

GI number: 78484762

Start: 467429

End: 467968

Strand: Reverse

Name: 78484762

Synonym: Tcr_0417

Alternate gene names: NA

Gene position: 467968-467429 (Counterclockwise)

Preceding gene: 78484763

Following gene: 78484761

Centisome position: 19.28

GC content: 44.63

Gene sequence:

>540_bases
ATGAAACAGATTATCCCCATACTCGGACTTCCGATCCTCTGTTCAAGCCCAATAGCCTATGCGGTGCAATATTTAAATGA
AGATCAGGTTCAAGTGGCTTTATTTGGACAACAGGCCTCGTTCACCCCCACTCTCATCAAACTAAATGAAGAGCAACGAG
ATCAAATCGAAACAATCAGTGATGTCCGCCAACGTTGGAAAACCCAAAAAGCTTGGCAAGCCTTCACTCCTGAGAAAGAT
TTTCTCGGCTGGGTCATTATCGATAAAGTCATCGGAAAACACGAATTCATAACCTATGCGACAGCCATTTCACCCGAAGG
AAAGATTCTAGGCATTGAAATTATGGACTACCGTGAAACTTATGGCGGTGAAGTGCGTCATACTGAGTGGCGAACGCATT
TTGTCGGAACGAATAAAAACAGCCCTTTAGAGTTGGCGGAAGACATCCCTAATATCAGCGGTGCGACACTGTCTTGTCGG
AATGTCACAAATGGCGTTAAACGATTACTTGCACTGTATGAGGTGGTACTCAAGCCATGA

Upstream 100 bases:

>100_bases
TTGAAAAAACCAAATATGAAACGAAGTTGAAGCTCGGCTACAACTTCTAAGATTTTTACGGCGCGTTGGTCGCGCCTTAA
ATCACTCAAGGAATACGTCA

Downstream 100 bases:

>100_bases
TGCCAACACTTGCTAAACGAATGAGACCTCTACTCGGAACCTTTGTTGAAATCGGTGCGTTTATGCACGACCAGAAGGAA
GGCATTTTAAATCAGATATT

Product: FMN-binding

Products: NA

Alternate protein names: Na(+)-Translocating NADH-Quinone Reductase Subunit C

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKQIIPILGLPILCSSPIAYAVQYLNEDQVQVALFGQQASFTPTLIKLNEEQRDQIETISDVRQRWKTQKAWQAFTPEKD
FLGWVIIDKVIGKHEFITYATAISPEGKILGIEIMDYRETYGGEVRHTEWRTHFVGTNKNSPLELAEDIPNISGATLSCR
NVTNGVKRLLALYEVVLKP

Sequences:

>Translated_179_residues
MKQIIPILGLPILCSSPIAYAVQYLNEDQVQVALFGQQASFTPTLIKLNEEQRDQIETISDVRQRWKTQKAWQAFTPEKD
FLGWVIIDKVIGKHEFITYATAISPEGKILGIEIMDYRETYGGEVRHTEWRTHFVGTNKNSPLELAEDIPNISGATLSCR
NVTNGVKRLLALYEVVLKP
>Mature_179_residues
MKQIIPILGLPILCSSPIAYAVQYLNEDQVQVALFGQQASFTPTLIKLNEEQRDQIETISDVRQRWKTQKAWQAFTPEKD
FLGWVIIDKVIGKHEFITYATAISPEGKILGIEIMDYRETYGGEVRHTEWRTHFVGTNKNSPLELAEDIPNISGATLSCR
NVTNGVKRLLALYEVVLKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20318; Mature: 20318

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIIPILGLPILCSSPIAYAVQYLNEDQVQVALFGQQASFTPTLIKLNEEQRDQIETIS
CCCCCCHHCCHHHHCCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHH
DVRQRWKTQKAWQAFTPEKDFLGWVIIDKVIGKHEFITYATAISPEGKILGIEIMDYRET
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHEEEEEEECCCCCEEEEEEEECHHH
YGGEVRHTEWRTHFVGTNKNSPLELAEDIPNISGATLSCRNVTNGVKRLLALYEVVLKP
CCCCEEECEEEEEEECCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQIIPILGLPILCSSPIAYAVQYLNEDQVQVALFGQQASFTPTLIKLNEEQRDQIETIS
CCCCCCHHCCHHHHCCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHH
DVRQRWKTQKAWQAFTPEKDFLGWVIIDKVIGKHEFITYATAISPEGKILGIEIMDYRET
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHEEEEEEECCCCCEEEEEEEECHHH
YGGEVRHTEWRTHFVGTNKNSPLELAEDIPNISGATLSCRNVTNGVKRLLALYEVVLKP
CCCCEEECEEEEEEECCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA