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The map label for this gene is 78484761

Identifier: 78484761

GI number: 78484761

Start: 466599

End: 467432

Strand: Reverse

Name: 78484761

Synonym: Tcr_0416

Alternate gene names: NA

Gene position: 467432-466599 (Counterclockwise)

Preceding gene: 78484762

Following gene: 78484760

Centisome position: 19.25

GC content: 46.4

Gene sequence:

>834_bases
ATGATGCCAACACTTGCTAAACGAATGAGACCTCTACTCGGAACCTTTGTTGAAATCGGTGCGTTTATGCACGACCAGAA
GGAAGGCATTTTAAATCAGATATTCAATAAAATAGAATGCATTCATAATCAAATGAGTTTTCACAATCCCAATAGTGCGT
TGTCCAACCTCAACAAGTCACCTGGTAAATGGATCGACCTGCCGAATGAAACGCTCTCAGTTATGCGCAAAGCCAAACAG
CTGAGCTTGGATTCCGACCATCTTTTTAACTGCACGCTTGGCGGGTATCTGGTAAAGAAAAACATACTCCCGAACCACTT
CGTGCACTCTTTTCAACCGAGCGGCAAAGCATCGGATATTGAGATACGAAATCATCAGGCCCGACTCACAGCGCCGGTTT
TAATTTCGTTGGACGGAATTGCAAAGGGTTACGCCGTTGATCTAGCCATTGATGTTATGAAACAACACAACATTGTGGCG
GGCTGGGTGAATGCCGGTGGAGACATGAAAGTCTTTGGCGACCTGACATTACCTGTCAGCCAGCGCCAGAAACACACAAG
CCTTCAGCCACTTGTTCAACTTAACAATCAAGCGCTTGCCTCTTCAGAAGTTCACTCGCAAAGCAACGCACGTTTTCCTG
GTCAAATTCTTGATAACACAGGTCAGCAACCAAACCCCGGAGTCATCAGTGTCATGGCAAAAGACTCTTGGCTGGCCGAC
GGCTTGACCAAAGTCTTGGCTTTGCAACCCGAATCAGAACGGCACACAACAGCAAAACGCTTTAATGCGATATATCTCGC
TTCGTCAACGTCAATCAACAGGACCGCTTTATGA

Upstream 100 bases:

>100_bases
CGGAAGACATCCCTAATATCAGCGGTGCGACACTGTCTTGTCGGAATGTCACAAATGGCGTTAAACGATTACTTGCACTG
TATGAGGTGGTACTCAAGCC

Downstream 100 bases:

>100_bases
ATGGCTATCCTAAACACTTTTTATTGTTTGTACTCGCCATAATTGTAATATTACTGATCAGTGGCGTCCTTTTAGTGCCG
GCTTTTTTATTTTTCCGTAT

Product: ApbE-like lipoprotein

Products: NA

Alternate protein names: ApbE Family Protein; ApbE-Like Lipoprotein; Thiamine Biosynthesis Lipoprotein ApbE Transmembrane; Thiamine Biosynthesis Lipoprotein APBE Transmembrane; Thiamine Biosynthesis Lipoprotein; Abpe Family Protein

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MMPTLAKRMRPLLGTFVEIGAFMHDQKEGILNQIFNKIECIHNQMSFHNPNSALSNLNKSPGKWIDLPNETLSVMRKAKQ
LSLDSDHLFNCTLGGYLVKKNILPNHFVHSFQPSGKASDIEIRNHQARLTAPVLISLDGIAKGYAVDLAIDVMKQHNIVA
GWVNAGGDMKVFGDLTLPVSQRQKHTSLQPLVQLNNQALASSEVHSQSNARFPGQILDNTGQQPNPGVISVMAKDSWLAD
GLTKVLALQPESERHTTAKRFNAIYLASSTSINRTAL

Sequences:

>Translated_277_residues
MMPTLAKRMRPLLGTFVEIGAFMHDQKEGILNQIFNKIECIHNQMSFHNPNSALSNLNKSPGKWIDLPNETLSVMRKAKQ
LSLDSDHLFNCTLGGYLVKKNILPNHFVHSFQPSGKASDIEIRNHQARLTAPVLISLDGIAKGYAVDLAIDVMKQHNIVA
GWVNAGGDMKVFGDLTLPVSQRQKHTSLQPLVQLNNQALASSEVHSQSNARFPGQILDNTGQQPNPGVISVMAKDSWLAD
GLTKVLALQPESERHTTAKRFNAIYLASSTSINRTAL
>Mature_277_residues
MMPTLAKRMRPLLGTFVEIGAFMHDQKEGILNQIFNKIECIHNQMSFHNPNSALSNLNKSPGKWIDLPNETLSVMRKAKQ
LSLDSDHLFNCTLGGYLVKKNILPNHFVHSFQPSGKASDIEIRNHQARLTAPVLISLDGIAKGYAVDLAIDVMKQHNIVA
GWVNAGGDMKVFGDLTLPVSQRQKHTSLQPLVQLNNQALASSEVHSQSNARFPGQILDNTGQQPNPGVISVMAKDSWLAD
GLTKVLALQPESERHTTAKRFNAIYLASSTSINRTAL

Specific function: Unknown

COG id: COG1477

COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30506; Mature: 30506

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPTLAKRMRPLLGTFVEIGAFMHDQKEGILNQIFNKIECIHNQMSFHNPNSALSNLNKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC
PGKWIDLPNETLSVMRKAKQLSLDSDHLFNCTLGGYLVKKNILPNHFVHSFQPSGKASDI
CCCEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCHHHHHCCCCCCCCCCE
EIRNHQARLTAPVLISLDGIAKGYAVDLAIDVMKQHNIVAGWVNAGGDMKVFGDLTLPVS
EEECCCEEECEEEEEEECCCCCCEEHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCHH
QRQKHTSLQPLVQLNNQALASSEVHSQSNARFPGQILDNTGQQPNPGVISVMAKDSWLAD
HHHHHCCHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCHHHH
GLTKVLALQPESERHTTAKRFNAIYLASSTSINRTAL
HHHHHHCCCCCHHHHHHHHHHCEEEEEECCCCCCCCC
>Mature Secondary Structure
MMPTLAKRMRPLLGTFVEIGAFMHDQKEGILNQIFNKIECIHNQMSFHNPNSALSNLNKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC
PGKWIDLPNETLSVMRKAKQLSLDSDHLFNCTLGGYLVKKNILPNHFVHSFQPSGKASDI
CCCEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCHHHHHCCCCCCCCCCE
EIRNHQARLTAPVLISLDGIAKGYAVDLAIDVMKQHNIVAGWVNAGGDMKVFGDLTLPVS
EEECCCEEECEEEEEEECCCCCCEEHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCHH
QRQKHTSLQPLVQLNNQALASSEVHSQSNARFPGQILDNTGQQPNPGVISVMAKDSWLAD
HHHHHCCHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCHHHH
GLTKVLALQPESERHTTAKRFNAIYLASSTSINRTAL
HHHHHHCCCCCHHHHHHHHHHCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA