Click here to switch to the map view.

The map label for this gene is 78484741

Identifier: 78484741

GI number: 78484741

Start: 446959

End: 447348

Strand: Reverse

Name: 78484741

Synonym: Tcr_0396

Alternate gene names: NA

Gene position: 447348-446959 (Counterclockwise)

Preceding gene: 78484742

Following gene: 78484735

Centisome position: 18.43

GC content: 46.67

Gene sequence:

>390_bases
ATGAGAAAAATTACCATTCTGATGATTGGCCTAGGACGTATCGGCGGGAAGTTTTATGAGCAGTTTACTCAGATGAATTC
TGAGAACATTGAAATCATCGGCATCAGCGAACCGAATCGAGACAACCCGTTGCTGGACGATGCGCAAGATCGTGGCATCC
CAAACTTCCCTGATTTTGAAGAAGCCCTGGATCAGTTTGGTAGTGAAATCGACATCATCATGGACACCTCTAACCGCGCT
GAACTGAAACAAGCCATCAGACAAGCGCTACAGGAACGAAAAAACCAGCACACGGTTCTGGTCCCAATGGTGGTCGATTA
CCTCATGTGGTATCTTTTACCTGGCTCAGAAGCCATTCCACAGTCACACCACGAAAACATCGGTTACTAA

Upstream 100 bases:

>100_bases
ATGGCAGACCTATTTCAATTACCCTATACTGTGCACTGAATAAAATCATACGAAATAATATGTATTTTTAAATACAAACA
AACCATGAGGATTATGAAAC

Downstream 100 bases:

>100_bases
ACTTACCGATCATTCTCAAAAAGCCCGCTTTACGCGGGTTTTTTTATAACAGAAAAGATGTTTTTTCAGACATAAAAAAA
CCCCGACAATGCGGGGCTTT

Product: homoserine dehydrogenase, NAD-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRKITILMIGLGRIGGKFYEQFTQMNSENIEIIGISEPNRDNPLLDDAQDRGIPNFPDFEEALDQFGSEIDIIMDTSNRA
ELKQAIRQALQERKNQHTVLVPMVVDYLMWYLLPGSEAIPQSHHENIGY

Sequences:

>Translated_129_residues
MRKITILMIGLGRIGGKFYEQFTQMNSENIEIIGISEPNRDNPLLDDAQDRGIPNFPDFEEALDQFGSEIDIIMDTSNRA
ELKQAIRQALQERKNQHTVLVPMVVDYLMWYLLPGSEAIPQSHHENIGY
>Mature_129_residues
MRKITILMIGLGRIGGKFYEQFTQMNSENIEIIGISEPNRDNPLLDDAQDRGIPNFPDFEEALDQFGSEIDIIMDTSNRA
ELKQAIRQALQERKNQHTVLVPMVVDYLMWYLLPGSEAIPQSHHENIGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14805; Mature: 14805

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKITILMIGLGRIGGKFYEQFTQMNSENIEIIGISEPNRDNPLLDDAQDRGIPNFPDFE
CCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCHH
EALDQFGSEIDIIMDTSNRAELKQAIRQALQERKNQHTVLVPMVVDYLMWYLLPGSEAIP
HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCC
QSHHENIGY
CCCCCCCCC
>Mature Secondary Structure
MRKITILMIGLGRIGGKFYEQFTQMNSENIEIIGISEPNRDNPLLDDAQDRGIPNFPDFE
CCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCHH
EALDQFGSEIDIIMDTSNRAELKQAIRQALQERKNQHTVLVPMVVDYLMWYLLPGSEAIP
HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCC
QSHHENIGY
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA