| Definition | Thiomicrospira crunogena XCL-2, complete genome. |
|---|---|
| Accession | NC_007520 |
| Length | 2,427,734 |
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The map label for this gene is yhhP [C]
Identifier: 78484698
GI number: 78484698
Start: 401945
End: 402178
Strand: Reverse
Name: yhhP [C]
Synonym: Tcr_0353
Alternate gene names: 78484698
Gene position: 402178-401945 (Counterclockwise)
Preceding gene: 78484706
Following gene: 78484697
Centisome position: 16.57
GC content: 40.6
Gene sequence:
>234_bases ATGGCTGAAACAACGCGTATTGATGCAAAAGGATTAAAATGTCCAATGCCTGTCATTAAGTTGCAGCAACAGACACGTAA AAGTGATGAAGGAGATCGCATCTTAATCGAATGCACCGACCCGGGAGCAGAGAAAGACATCTCCAGTTGGTGCAAGGTCA ATAAACATAAAATCATTGAAATAAACGCAACCGATACTGGATGCGTAATCGAAATTGAAGTGCATTCGTTATAA
Upstream 100 bases:
>100_bases TTTTCCAATCGTTGGAAAGCCATTGTAAAAATAACGTTTTAAAATCCAGACATTCCTAGCGTAAAATACCGCTAATTATA ACAACTTATTGGTAAAAAAA
Downstream 100 bases:
>100_bases ATTTTATCGATCACCAACCTCAATTATTTAACTCGCACAAACCCAATTTCTTTAGGTATAATCGAAGACAGGTCTAAGTT AAAACGCGTTAACTTAATTA
Product: SirA-like
Products: NA
Alternate protein names: SirA-Like
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MAETTRIDAKGLKCPMPVIKLQQQTRKSDEGDRILIECTDPGAEKDISSWCKVNKHKIIEINATDTGCVIEIEVHSL
Sequences:
>Translated_77_residues MAETTRIDAKGLKCPMPVIKLQQQTRKSDEGDRILIECTDPGAEKDISSWCKVNKHKIIEINATDTGCVIEIEVHSL >Mature_76_residues AETTRIDAKGLKCPMPVIKLQQQTRKSDEGDRILIECTDPGAEKDISSWCKVNKHKIIEINATDTGCVIEIEVHSL
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8594; Mature: 8463
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETTRIDAKGLKCPMPVIKLQQQTRKSDEGDRILIECTDPGAEKDISSWCKVNKHKIIE CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCEEEE INATDTGCVIEIEVHSL EECCCCCEEEEEEEECC >Mature Secondary Structure AETTRIDAKGLKCPMPVIKLQQQTRKSDEGDRILIECTDPGAEKDISSWCKVNKHKIIE CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCEEEE INATDTGCVIEIEVHSL EECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA