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The map label for this gene is ycgL [C]

Identifier: 78484583

GI number: 78484583

Start: 283180

End: 283473

Strand: Reverse

Name: ycgL [C]

Synonym: Tcr_0238

Alternate gene names: 78484583

Gene position: 283473-283180 (Counterclockwise)

Preceding gene: 78484606

Following gene: 78484582

Centisome position: 11.68

GC content: 41.16

Gene sequence:

>294_bases
ATGGCTTTATTGGTTTCAGCCTATAAAAGTGCAAAAAAAGACGAACTCTATTTATTTGTGCCTAAAGAAGATGGTTTGGA
AAAATTATCCGATGAACTGTTAGTCATGTTCGGAGAACCACAACATGTCATTGATTTTGATCTGACAGAAAAACGTAAGC
TGGCACGAGTGGACGCCGAAGAAGTAAAGAAAGCCCTCGAAACCAAAGGCTACTTCATGCAAATGCCGCCTTCGGAAATT
GAAAAAATGGGTGACATGCCGCCGCCGCCGGAACATCTTGACAACATTTTTTAA

Upstream 100 bases:

>100_bases
AAATCGGCCACAAGGTCAAGAAATTGCCGAAGATTCTCCTTAAAGTGTTTGGTCTCAATTTGATAAAATACCCCCATCTC
GAATTTAAAAGGAAGACATT

Downstream 100 bases:

>100_bases
ACGAATTCAGGCAAAGTTCGACACGCTGTTTTAAAATGAATACCCGATTATTTCAGTCGGGTATTGATAATTCGTCGTTT
GTCGTTAAAATGAACGTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MALLVSAYKSAKKDELYLFVPKEDGLEKLSDELLVMFGEPQHVIDFDLTEKRKLARVDAEEVKKALETKGYFMQMPPSEI
EKMGDMPPPPEHLDNIF

Sequences:

>Translated_97_residues
MALLVSAYKSAKKDELYLFVPKEDGLEKLSDELLVMFGEPQHVIDFDLTEKRKLARVDAEEVKKALETKGYFMQMPPSEI
EKMGDMPPPPEHLDNIF
>Mature_96_residues
ALLVSAYKSAKKDELYLFVPKEDGLEKLSDELLVMFGEPQHVIDFDLTEKRKLARVDAEEVKKALETKGYFMQMPPSEIE
KMGDMPPPPEHLDNIF

Specific function: Unknown

COG id: COG3100

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0745 family

Homologues:

Organism=Escherichia coli, GI308199518, Length=75, Percent_Identity=38.6666666666667, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y238_THICR (Q31J39)

Other databases:

- EMBL:   CP000109
- RefSeq:   YP_390508.1
- ProteinModelPortal:   Q31J39
- SMR:   Q31J39
- STRING:   Q31J39
- GeneID:   3761638
- GenomeReviews:   CP000109_GR
- KEGG:   tcx:Tcr_0238
- NMPDR:   fig|317025.3.peg.424
- eggNOG:   COG3100
- HOGENOM:   HBG754037
- OMA:   TNESKLA
- PhylomeDB:   Q31J39
- BioCyc:   TCRU317025:TCR_0238-MONOMER
- HAMAP:   MF_01866
- InterPro:   IPR007840
- ProDom:   PD030374

Pfam domain/function: PF05166 YcgL

EC number: NA

Molecular weight: Translated: 11142; Mature: 11011

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLVSAYKSAKKDELYLFVPKEDGLEKLSDELLVMFGEPQHVIDFDLTEKRKLARVDAE
CCEEECHHCCCCCCCEEEEECCCCCHHHHHHHEEEEECCCCEEEECCCCCHHHHHCCCHH
EVKKALETKGYFMQMPPSEIEKMGDMPPPPEHLDNIF
HHHHHHHCCCCEEECCHHHHHHCCCCCCCHHHCCCCC
>Mature Secondary Structure 
ALLVSAYKSAKKDELYLFVPKEDGLEKLSDELLVMFGEPQHVIDFDLTEKRKLARVDAE
CEEECHHCCCCCCCEEEEECCCCCHHHHHHHEEEEECCCCEEEECCCCCHHHHHCCCHH
EVKKALETKGYFMQMPPSEIEKMGDMPPPPEHLDNIF
HHHHHHHCCCCEEECCHHHHHHCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA