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The map label for this gene is bepC [H]

Identifier: 78484549

GI number: 78484549

Start: 240816

End: 242141

Strand: Reverse

Name: bepC [H]

Synonym: Tcr_0204

Alternate gene names: 78484549

Gene position: 242141-240816 (Counterclockwise)

Preceding gene: 78484550

Following gene: 78484545

Centisome position: 9.97

GC content: 42.99

Gene sequence:

>1326_bases
ATGTCACCGACTCAAAAACCATTACAACTGACCGTAATAGCCTGTACGGCTTTACTTACTTTTTCATTTAATGCTTACGC
CATTAATTTAAAAGAAGCCGTTGAAGACGCTGTTCTCCATAACCCTGAATTTCGACAAGAAGTGAAAGCGTACCAAGCCA
TAGAAGCTGAAGTGAAAGGAGCCAAAGGCGGATATTATCCCAGTCTCGACTTAAATGCCGGGATGGGATATGAAGAAGTC
GATCGCCCAGGCATTGACAACATTGGCAATGGCTTAACGCGCAGAGAAACGTCCGTTAAATTAACTCAAAATCTGTTCGA
AGGATTTGGCACGCAAGATGAAATCAAACGCTTGCAATATCGTCTTGATGCACAAGCCTACAAAACGCTTTCCAAAGCAA
ATGATGTCGCCTTACAAATGATTCAAGCTTATATTAATTTATTAAAAGAAAAAAAATTATTGAATTTGGCGCAAACGAAT
TTAGAAACCCACTTAAAACTGCTGGACCAAATCGAACGCCGTACCGAAGCGGGCATCGGGAATCAGGTTGAAGTTGACCA
AGCTAAAGCACGTTTGGCTTTAGCTCGATCAAACTATGGCGCGGTTGAAAATAGGTTCTTTGATGCCCGAGCCAAGTTTC
AACGTATCTTGGGACGAATGCCAGAAGACAACCTAATTGAGCCGAAAGCGGAATTTCCATTGCCTAAAACACAGGAAGAG
GCCATCAATGTTGCCCTAATGGACCACCCGACCTTAAAATCAGCCAGTGCGGACATCGCTGCGGCCAAAATGCAATATGA
CTTATCAGGTTCCAACTACTATCCACGCGTTGATTTGGAAGTTGAAAAGACGTTTGACAATAACTTATCCGGCATTGAAG
GCAACAACGAATACCTTCAAGCCATGGTGCGTTTTAAATACAACCTCTACAATGGGGGGCGAGACAGTGCCAACCGAGAA
AGAACAGCGAGCAATTTTCAACAAGCGACCGAAGTTCGGAACAACACGCACCGACAAGTGATTGAAAATTTAAAATACGC
TTGGAACGCCAAGGTCTACATCAACAACCAACTTGATTACATGCGTCAGCATATTAAACTTACACGAGATACGCTGAATG
GATATCGTAAACAGTTCAGTCTCGGGCGTCGCTCTTTATTAGACTTACTGAATACCGAAAATGAATACATTAATGGGCTC
AATACCTTGGTGAGCAGTGAAGCAGATCAACTAACGGCCAAATACCGCATTTTAAATGCTACCGGGCACTTATTAAGCAC
CATGGGAGTTAATTATGACTTCATCCAACCCTCTGAGACGCCATAA

Upstream 100 bases:

>100_bases
CAGCTTACTAGAAAAACTCGATGCCAAAGACCGCTTAAACTTAGTCATAAAAATACAAAATTGGCACAAAAATGCACTCT
AACAGAAAAGATAAAACTCT

Downstream 100 bases:

>100_bases
ACTTATAAAGCCATTCACCATGAATCAGTTCACCTTTAAGGAAAAGGCCCAATACAGTTGAACGGCTCCCATTACTACCA
CTAAGAAACCGGCCAAACGA

Product: Type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MSPTQKPLQLTVIACTALLTFSFNAYAINLKEAVEDAVLHNPEFRQEVKAYQAIEAEVKGAKGGYYPSLDLNAGMGYEEV
DRPGIDNIGNGLTRRETSVKLTQNLFEGFGTQDEIKRLQYRLDAQAYKTLSKANDVALQMIQAYINLLKEKKLLNLAQTN
LETHLKLLDQIERRTEAGIGNQVEVDQAKARLALARSNYGAVENRFFDARAKFQRILGRMPEDNLIEPKAEFPLPKTQEE
AINVALMDHPTLKSASADIAAAKMQYDLSGSNYYPRVDLEVEKTFDNNLSGIEGNNEYLQAMVRFKYNLYNGGRDSANRE
RTASNFQQATEVRNNTHRQVIENLKYAWNAKVYINNQLDYMRQHIKLTRDTLNGYRKQFSLGRRSLLDLLNTENEYINGL
NTLVSSEADQLTAKYRILNATGHLLSTMGVNYDFIQPSETP

Sequences:

>Translated_441_residues
MSPTQKPLQLTVIACTALLTFSFNAYAINLKEAVEDAVLHNPEFRQEVKAYQAIEAEVKGAKGGYYPSLDLNAGMGYEEV
DRPGIDNIGNGLTRRETSVKLTQNLFEGFGTQDEIKRLQYRLDAQAYKTLSKANDVALQMIQAYINLLKEKKLLNLAQTN
LETHLKLLDQIERRTEAGIGNQVEVDQAKARLALARSNYGAVENRFFDARAKFQRILGRMPEDNLIEPKAEFPLPKTQEE
AINVALMDHPTLKSASADIAAAKMQYDLSGSNYYPRVDLEVEKTFDNNLSGIEGNNEYLQAMVRFKYNLYNGGRDSANRE
RTASNFQQATEVRNNTHRQVIENLKYAWNAKVYINNQLDYMRQHIKLTRDTLNGYRKQFSLGRRSLLDLLNTENEYINGL
NTLVSSEADQLTAKYRILNATGHLLSTMGVNYDFIQPSETP
>Mature_440_residues
SPTQKPLQLTVIACTALLTFSFNAYAINLKEAVEDAVLHNPEFRQEVKAYQAIEAEVKGAKGGYYPSLDLNAGMGYEEVD
RPGIDNIGNGLTRRETSVKLTQNLFEGFGTQDEIKRLQYRLDAQAYKTLSKANDVALQMIQAYINLLKEKKLLNLAQTNL
ETHLKLLDQIERRTEAGIGNQVEVDQAKARLALARSNYGAVENRFFDARAKFQRILGRMPEDNLIEPKAEFPLPKTQEEA
INVALMDHPTLKSASADIAAAKMQYDLSGSNYYPRVDLEVEKTFDNNLSGIEGNNEYLQAMVRFKYNLYNGGRDSANRER
TASNFQQATEVRNNTHRQVIENLKYAWNAKVYINNQLDYMRQHIKLTRDTLNGYRKQFSLGRRSLLDLLNTENEYINGLN
TLVSSEADQLTAKYRILNATGHLLSTMGVNYDFIQPSETP

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=428, Percent_Identity=22.6635514018692, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 50002; Mature: 49871

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTQKPLQLTVIACTALLTFSFNAYAINLKEAVEDAVLHNPEFRQEVKAYQAIEAEVKG
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
AKGGYYPSLDLNAGMGYEEVDRPGIDNIGNGLTRRETSVKLTQNLFEGFGTQDEIKRLQY
CCCCCCCCCCCCCCCCHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RLDAQAYKTLSKANDVALQMIQAYINLLKEKKLLNLAQTNLETHLKLLDQIERRTEAGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NQVEVDQAKARLALARSNYGAVENRFFDARAKFQRILGRMPEDNLIEPKAEFPLPKTQEE
CCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
AINVALMDHPTLKSASADIAAAKMQYDLSGSNYYPRVDLEVEKTFDNNLSGIEGNNEYLQ
HEEEEEECCCCCCCCCCHHHHHHEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHH
AMVRFKYNLYNGGRDSANRERTASNFQQATEVRNNTHRQVIENLKYAWNAKVYINNQLDY
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCHHH
MRQHIKLTRDTLNGYRKQFSLGRRSLLDLLNTENEYINGLNTLVSSEADQLTAKYRILNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHEEECH
TGHLLSTMGVNYDFIQPSETP
HHHHHHHHCCCCEECCCCCCC
>Mature Secondary Structure 
SPTQKPLQLTVIACTALLTFSFNAYAINLKEAVEDAVLHNPEFRQEVKAYQAIEAEVKG
CCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
AKGGYYPSLDLNAGMGYEEVDRPGIDNIGNGLTRRETSVKLTQNLFEGFGTQDEIKRLQY
CCCCCCCCCCCCCCCCHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RLDAQAYKTLSKANDVALQMIQAYINLLKEKKLLNLAQTNLETHLKLLDQIERRTEAGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NQVEVDQAKARLALARSNYGAVENRFFDARAKFQRILGRMPEDNLIEPKAEFPLPKTQEE
CCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
AINVALMDHPTLKSASADIAAAKMQYDLSGSNYYPRVDLEVEKTFDNNLSGIEGNNEYLQ
HEEEEEECCCCCCCCCCHHHHHHEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHH
AMVRFKYNLYNGGRDSANRERTASNFQQATEVRNNTHRQVIENLKYAWNAKVYINNQLDY
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCHHH
MRQHIKLTRDTLNGYRKQFSLGRRSLLDLLNTENEYINGLNTLVSSEADQLTAKYRILNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHEEECH
TGHLLSTMGVNYDFIQPSETP
HHHHHHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]