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The map label for this gene is 78484469

Identifier: 78484469

GI number: 78484469

Start: 157015

End: 157842

Strand: Reverse

Name: 78484469

Synonym: Tcr_0124

Alternate gene names: NA

Gene position: 157842-157015 (Counterclockwise)

Preceding gene: 78484470

Following gene: 78484468

Centisome position: 6.5

GC content: 41.18

Gene sequence:

>828_bases
ATGAAATCATTTATCTCAAGAACCATGTTGTGGCCGTTTTTTATCAGTGCCTTGCTCTTTGTGCCGTTTCTAACGCACGC
CGATGACTGTGCCCCTAAAAAAATAGATGTCTGGGTCAAAGCGAGCTTTGCACTCAGTGGTGATACAGTGATTATTCAAA
ACAAACAATATCGTTTAATCGGTGTAGAAGCCCCCCAAATTGAAAAGAAACAAAAATTCTATACCACAGGACAACCTTTA
GCGAAACAATCACAAACGAACCTGAATACCATACTGGCCAACCATAACTTAACTGTCGGCGTAGAATACGATCAAAAGCG
ATCTGATGAGTTCTATCGAACCTATGTGCACCTTTATGTAAAAGAAGGCGATAAAATCATTAATTTGCAAAAACGGGTGC
TTGAAAGTGGTTTGGCTCTGGCCCAATCAGAACCACCGAATGAATTGCACCAGAAATGCTATTACGAGGCTGAAAAAACC
GCCCGACAAAATAAAGTGGCTTTATGGAGCCTGGCCGAAAAACGCCCAGACTTAAATTATCCCATTGCACCGTCTTCAAA
CATCACAACCGATGACGAGGGCTATCATATTTTTAAAGGCAAGATTGTCAAAGTCGACAAAAGTTCAAACAACTACATTC
TCAATATGGACACGACGGGCATCCGAATTCGCAAAGCCGATTGGGATCGTTTCGATTACGATCAACTTGAACAATTGGAA
GGAAAAGTCATTGAAGCACGAGGGTTTGGTTTTTTATTTCAAGGCGCCATGTTTGTCAAAATACACTCGCCTTACGCGAT
TGATCGATTAAACCCTGTTAATCAATAA

Upstream 100 bases:

>100_bases
TCCAGCGAATAGACCCGCTGACACATCCATACAACCGTTGCTTTTGACCGTCACGCATTTTGCGCTTCAAATCCCGGCAA
AAGACTATACAATACTCCCT

Downstream 100 bases:

>100_bases
CTGAACTGTAAGATTTAACGCGCTTTTTATGACATTTTCCTGTCTTCAACCGTTAAAATAACCTCTTAAATTTTTTGAGA
CTTCGTGCTGCCACAACCAG

Product: nuclease (SNase-like)

Products: NA

Alternate protein names: Staphylococcal Nuclease; Staphylococcal Nuclease-Like Protein; Rmonuclease Family Protein; Staphylococcal Nuclease Homologue; Staphylococcal Nuclease Homolog

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKSFISRTMLWPFFISALLFVPFLTHADDCAPKKIDVWVKASFALSGDTVIIQNKQYRLIGVEAPQIEKKQKFYTTGQPL
AKQSQTNLNTILANHNLTVGVEYDQKRSDEFYRTYVHLYVKEGDKIINLQKRVLESGLALAQSEPPNELHQKCYYEAEKT
ARQNKVALWSLAEKRPDLNYPIAPSSNITTDDEGYHIFKGKIVKVDKSSNNYILNMDTTGIRIRKADWDRFDYDQLEQLE
GKVIEARGFGFLFQGAMFVKIHSPYAIDRLNPVNQ

Sequences:

>Translated_275_residues
MKSFISRTMLWPFFISALLFVPFLTHADDCAPKKIDVWVKASFALSGDTVIIQNKQYRLIGVEAPQIEKKQKFYTTGQPL
AKQSQTNLNTILANHNLTVGVEYDQKRSDEFYRTYVHLYVKEGDKIINLQKRVLESGLALAQSEPPNELHQKCYYEAEKT
ARQNKVALWSLAEKRPDLNYPIAPSSNITTDDEGYHIFKGKIVKVDKSSNNYILNMDTTGIRIRKADWDRFDYDQLEQLE
GKVIEARGFGFLFQGAMFVKIHSPYAIDRLNPVNQ
>Mature_275_residues
MKSFISRTMLWPFFISALLFVPFLTHADDCAPKKIDVWVKASFALSGDTVIIQNKQYRLIGVEAPQIEKKQKFYTTGQPL
AKQSQTNLNTILANHNLTVGVEYDQKRSDEFYRTYVHLYVKEGDKIINLQKRVLESGLALAQSEPPNELHQKCYYEAEKT
ARQNKVALWSLAEKRPDLNYPIAPSSNITTDDEGYHIFKGKIVKVDKSSNNYILNMDTTGIRIRKADWDRFDYDQLEQLE
GKVIEARGFGFLFQGAMFVKIHSPYAIDRLNPVNQ

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31648; Mature: 31648

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFISRTMLWPFFISALLFVPFLTHADDCAPKKIDVWVKASFALSGDTVIIQNKQYRLI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCEEEEECCCEEEE
GVEAPQIEKKQKFYTTGQPLAKQSQTNLNTILANHNLTVGVEYDQKRSDEFYRTYVHLYV
ECCCCCCCHHHHEECCCCCHHHHCCCCCEEEEECCCEEEEEECCCCCCHHHEEEEEEEEE
KEGDKIINLQKRVLESGLALAQSEPPNELHQKCYYEAEKTARQNKVALWSLAEKRPDLNY
ECCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCC
PIAPSSNITTDDEGYHIFKGKIVKVDKSSNNYILNMDTTGIRIRKADWDRFDYDQLEQLE
CCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHC
GKVIEARGFGFLFQGAMFVKIHSPYAIDRLNPVNQ
CEEEEECCCEEEECCEEEEEEECCEEECCCCCCCC
>Mature Secondary Structure
MKSFISRTMLWPFFISALLFVPFLTHADDCAPKKIDVWVKASFALSGDTVIIQNKQYRLI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCEEEEECCCEEEE
GVEAPQIEKKQKFYTTGQPLAKQSQTNLNTILANHNLTVGVEYDQKRSDEFYRTYVHLYV
ECCCCCCCHHHHEECCCCCHHHHCCCCCEEEEECCCEEEEEECCCCCCHHHEEEEEEEEE
KEGDKIINLQKRVLESGLALAQSEPPNELHQKCYYEAEKTARQNKVALWSLAEKRPDLNY
ECCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCC
PIAPSSNITTDDEGYHIFKGKIVKVDKSSNNYILNMDTTGIRIRKADWDRFDYDQLEQLE
CCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHC
GKVIEARGFGFLFQGAMFVKIHSPYAIDRLNPVNQ
CEEEEECCCEEEECCEEEEEEECCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA