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The map label for this gene is 78484456

Identifier: 78484456

GI number: 78484456

Start: 141759

End: 142295

Strand: Reverse

Name: 78484456

Synonym: Tcr_0111

Alternate gene names: NA

Gene position: 142295-141759 (Counterclockwise)

Preceding gene: 78484461

Following gene: 78484455

Centisome position: 5.86

GC content: 43.76

Gene sequence:

>537_bases
ATGCGACAACTGCTGAGTCTTCTCTTAGCTTCTTTGATGCTATTAGGAGGGTGTGAACAACTTGCGAATGCCGATTCATA
CCAACCGTCCAAACTAAAAGAGCTTACCAATCTACAAACCTTGGCCAAGCAATCTCGAGAACAGAATCTTCCGATTATGC
TGACAGTTGGAGCCGAGTGGTGCGATTTTTGCCATCAACTGCGTGAAGAAGTGCTGGATCCAATGGCTTTGGGAGGCGAT
TATGAAGGACGCTATATGTTCATGCGTTACTTGAGCATTGATGATCATACGCCAATTCCAGGCGTCGATGGTTCACCAAT
CATCAAAAACAAGTTGGCTTACCGTTTAAATGCCGATCTTACCCCAACGGTGGTCTTTATTGACGGTAACGGTAACGAAG
TGGCCGATAAAATCATTGGCATTGCCAATATTGAACTGTACACCACTCTGATTCATAAACGCTTAAATCAAGCGTATCAA
AACATGAATAACCCACTTAGAATCGATGCGATGCCGACTTCAATCAGTGAACCATAA

Upstream 100 bases:

>100_bases
ACCTATGAAACTTGATGAAATCAAGTCGAATGCTCGTACAAGTCAGATAATAGGGTTCAAAAACCGGATTCAATCATGAC
TTTTAAACAAGGAAACAGTA

Downstream 100 bases:

>100_bases
TGCGCTTTGACTTGAAAGCGAGCAAGAGTTGAAATCTCTTGCCTAAAAAACACGCTAAGCCCTTATAATAGACACATTAT
TCAATTCATTCTGGACGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRQLLSLLLASLMLLGGCEQLANADSYQPSKLKELTNLQTLAKQSREQNLPIMLTVGAEWCDFCHQLREEVLDPMALGGD
YEGRYMFMRYLSIDDHTPIPGVDGSPIIKNKLAYRLNADLTPTVVFIDGNGNEVADKIIGIANIELYTTLIHKRLNQAYQ
NMNNPLRIDAMPTSISEP

Sequences:

>Translated_178_residues
MRQLLSLLLASLMLLGGCEQLANADSYQPSKLKELTNLQTLAKQSREQNLPIMLTVGAEWCDFCHQLREEVLDPMALGGD
YEGRYMFMRYLSIDDHTPIPGVDGSPIIKNKLAYRLNADLTPTVVFIDGNGNEVADKIIGIANIELYTTLIHKRLNQAYQ
NMNNPLRIDAMPTSISEP
>Mature_178_residues
MRQLLSLLLASLMLLGGCEQLANADSYQPSKLKELTNLQTLAKQSREQNLPIMLTVGAEWCDFCHQLREEVLDPMALGGD
YEGRYMFMRYLSIDDHTPIPGVDGSPIIKNKLAYRLNADLTPTVVFIDGNGNEVADKIIGIANIELYTTLIHKRLNQAYQ
NMNNPLRIDAMPTSISEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19938; Mature: 19938

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQLLSLLLASLMLLGGCEQLANADSYQPSKLKELTNLQTLAKQSREQNLPIMLTVGAEW
CHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHH
CDFCHQLREEVLDPMALGGDYEGRYMFMRYLSIDDHTPIPGVDGSPIIKNKLAYRLNADL
HHHHHHHHHHHHCHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHEECCCC
TPTVVFIDGNGNEVADKIIGIANIELYTTLIHKRLNQAYQNMNNPLRIDAMPTSISEP
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MRQLLSLLLASLMLLGGCEQLANADSYQPSKLKELTNLQTLAKQSREQNLPIMLTVGAEW
CHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHH
CDFCHQLREEVLDPMALGGDYEGRYMFMRYLSIDDHTPIPGVDGSPIIKNKLAYRLNADL
HHHHHHHHHHHHCHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHEECCCC
TPTVVFIDGNGNEVADKIIGIANIELYTTLIHKRLNQAYQNMNNPLRIDAMPTSISEP
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA