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The map label for this gene is cmoB

Identifier: 78484424

GI number: 78484424

Start: 99789

End: 100787

Strand: Reverse

Name: cmoB

Synonym: Tcr_0078

Alternate gene names: 78484424

Gene position: 100787-99789 (Counterclockwise)

Preceding gene: 78484425

Following gene: 78484423

Centisome position: 4.15

GC content: 46.25

Gene sequence:

>999_bases
GTGAAACATTATCACCAACACTATTCTTCTTTTTGGCCCAAACTGGAAGAAGCTCGCCTCGGACACTGGCAAAATGCACT
AGAAGCTGCTTTAGAGACTGCTTTGGATCCGGATGCCAATGGCAACCTGCCAAAATGGCTCCCGGCATTAGAAACTGTAA
TGGCTTTTCCCTCTTCAGATTCGGCTGAACTGAGTCAATCCGCTATTAAAGCGCACTCTCAACCGTTTTCGGAGGATGAT
AAGGAAAAACTGACACAAGCGCTGAAAGCCTTTATGCCTTGGCGAAAAGGACCCTTTGAAATTGAAGGTATTTACATTGA
CACCGAGTGGCATTCTGATTGGAAATGGGATCGAGTCTCACCGCACTTAAGCTCATTAAAAGGCCGAAAAGTACTCGATA
TTGGTTGTGGCAGTGGCTACCATCTCTGGCGCATGCTGGGAGACGGTGCCGAGCTTGCTTTAGGCGTTGATCCCGGGTTG
CTCTTTATGACCCAATTCTTAGCCATTAAACATTTTGTCGGAGAATCCTTGCCGGCCTACTTTCTCCCACTGACTTTGGA
GCAATTGCCAAAAACCCAACCATCAGAAGTCTTTGACACGGTTTTTTCAATGGGTGTGTTGTATCACCGTCGCTCTCCAA
TTGACCATATCATGGACTTAAAACGTTACTTGAAGCCGGGTGGCGAATTGGTTTTGGAAACATTGGTGATACCTGATGCC
CAAGGCCAACTACTGGTGCCGAAAGAACGTTACGCCCAAATGAATAATGTTTGGTTTATACCCTCTGTCCAAGAGCTTGG
ACATTGGTTAGAAAAGTGCGGGTTCAAAAATGTTCGCTGTGTCGATTTGGATCAAACTTCTGTCAAGGAGCAACGTACCA
CGGAATGGATGAACTGGAATTCCTTAGCCGACTTCCTTGACCCAAACGACTCCAATAAAACCATTGAAGGTTACTCCGCT
CCATTGAGAGCCGTGATGATTGCCGATAAGCCTTGTTAA

Upstream 100 bases:

>100_bases
ACAGTCCGGATTTAAAGCCGCTAACATTTGGTTTCAAGCCTATAATTTCGCTTCCTTTCTGGCCATTAAAGCTTAAAACG
ATACACTCATAAGGTTCCAT

Downstream 100 bases:

>100_bases
TTTAGAGCGTTTAATAAAGAGGCATATTTCAAGAGGGCACTCTTTAGTAGCCGCCCTAAATTAACAGTTCATGATATCGT
TTTTTATTTTTAGGTTTATG

Product: methyltransferase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MKHYHQHYSSFWPKLEEARLGHWQNALEAALETALDPDANGNLPKWLPALETVMAFPSSDSAELSQSAIKAHSQPFSEDD
KEKLTQALKAFMPWRKGPFEIEGIYIDTEWHSDWKWDRVSPHLSSLKGRKVLDIGCGSGYHLWRMLGDGAELALGVDPGL
LFMTQFLAIKHFVGESLPAYFLPLTLEQLPKTQPSEVFDTVFSMGVLYHRRSPIDHIMDLKRYLKPGGELVLETLVIPDA
QGQLLVPKERYAQMNNVWFIPSVQELGHWLEKCGFKNVRCVDLDQTSVKEQRTTEWMNWNSLADFLDPNDSNKTIEGYSA
PLRAVMIADKPC

Sequences:

>Translated_332_residues
MKHYHQHYSSFWPKLEEARLGHWQNALEAALETALDPDANGNLPKWLPALETVMAFPSSDSAELSQSAIKAHSQPFSEDD
KEKLTQALKAFMPWRKGPFEIEGIYIDTEWHSDWKWDRVSPHLSSLKGRKVLDIGCGSGYHLWRMLGDGAELALGVDPGL
LFMTQFLAIKHFVGESLPAYFLPLTLEQLPKTQPSEVFDTVFSMGVLYHRRSPIDHIMDLKRYLKPGGELVLETLVIPDA
QGQLLVPKERYAQMNNVWFIPSVQELGHWLEKCGFKNVRCVDLDQTSVKEQRTTEWMNWNSLADFLDPNDSNKTIEGYSA
PLRAVMIADKPC
>Mature_332_residues
MKHYHQHYSSFWPKLEEARLGHWQNALEAALETALDPDANGNLPKWLPALETVMAFPSSDSAELSQSAIKAHSQPFSEDD
KEKLTQALKAFMPWRKGPFEIEGIYIDTEWHSDWKWDRVSPHLSSLKGRKVLDIGCGSGYHLWRMLGDGAELALGVDPGL
LFMTQFLAIKHFVGESLPAYFLPLTLEQLPKTQPSEVFDTVFSMGVLYHRRSPIDHIMDLKRYLKPGGELVLETLVIPDA
QGQLLVPKERYAQMNNVWFIPSVQELGHWLEKCGFKNVRCVDLDQTSVKEQRTTEWMNWNSLADFLDPNDSNKTIEGYSA
PLRAVMIADKPC

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family

Homologues:

Organism=Escherichia coli, GI1788178, Length=324, Percent_Identity=49.6913580246914, Blast_Score=325, Evalue=2e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CMOB_THICR (Q31JJ8)

Other databases:

- EMBL:   CP000109
- RefSeq:   YP_390349.1
- ProteinModelPortal:   Q31JJ8
- STRING:   Q31JJ8
- GeneID:   3761463
- GenomeReviews:   CP000109_GR
- KEGG:   tcx:Tcr_0078
- NMPDR:   fig|317025.3.peg.231
- eggNOG:   COG0500
- HOGENOM:   HBG296882
- OMA:   DVIFCLG
- PhylomeDB:   Q31JJ8
- ProtClustDB:   PRK15068
- BioCyc:   TCRU317025:TCR_0078-MONOMER
- HAMAP:   MF_01590
- InterPro:   IPR010017
- TIGRFAMs:   TIGR00452

Pfam domain/function: PF08003 Methyltransf_9

EC number: NA

Molecular weight: Translated: 37839; Mature: 37839

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYHQHYSSFWPKLEEARLGHWQNALEAALETALDPDANGNLPKWLPALETVMAFPSSD
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
SAELSQSAIKAHSQPFSEDDKEKLTQALKAFMPWRKGPFEIEGIYIDTEWHSDWKWDRVS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCC
PHLSSLKGRKVLDIGCGSGYHLWRMLGDGAELALGVDPGLLFMTQFLAIKHFVGESLPAY
HHHHHCCCCEEEEECCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHH
FLPLTLEQLPKTQPSEVFDTVFSMGVLYHRRSPIDHIMDLKRYLKPGGELVLETLVIPDA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCC
QGQLLVPKERYAQMNNVWFIPSVQELGHWLEKCGFKNVRCVDLDQTSVKEQRTTEWMNWN
CCCEECCHHHHHHHCCEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCHH
SLADFLDPNDSNKTIEGYSAPLRAVMIADKPC
HHHHHCCCCCCCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MKHYHQHYSSFWPKLEEARLGHWQNALEAALETALDPDANGNLPKWLPALETVMAFPSSD
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
SAELSQSAIKAHSQPFSEDDKEKLTQALKAFMPWRKGPFEIEGIYIDTEWHSDWKWDRVS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCC
PHLSSLKGRKVLDIGCGSGYHLWRMLGDGAELALGVDPGLLFMTQFLAIKHFVGESLPAY
HHHHHCCCCEEEEECCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHH
FLPLTLEQLPKTQPSEVFDTVFSMGVLYHRRSPIDHIMDLKRYLKPGGELVLETLVIPDA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCC
QGQLLVPKERYAQMNNVWFIPSVQELGHWLEKCGFKNVRCVDLDQTSVKEQRTTEWMNWN
CCCEECCHHHHHHHCCEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCHH
SLADFLDPNDSNKTIEGYSAPLRAVMIADKPC
HHHHHCCCCCCCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA