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The map label for this gene is insF1 [C]

Identifier: 78358787

GI number: 78358787

Start: 3700453

End: 3700902

Strand: Reverse

Name: insF1 [C]

Synonym: Dde_3748

Alternate gene names: 78358787

Gene position: 3700902-3700453 (Counterclockwise)

Preceding gene: 78358789

Following gene: 78358786

Centisome position: 99.21

GC content: 50.44

Gene sequence:

>450_bases
TTGCTTTGCAGAGTCGTAATGGTCAGCCCAAGTGGGTTTTATAGCTGGCTAAAGGCTCCCGAAGACGCGCTGATGAGCAG
GAGCGAATCTTTGCGAAAGGCAATTCGATTTTACCATCAGCGAAGCAGCGGCGTATATGGATACCGAAAAATCCATAAGG
ACATCATAGAGGAAACAACCTTACGGTGCTGTCGCGAGACCGTCCGAAGAGCCATGAAGTCGGATGGGCTACGTTCAAAA
GTGACACGTAAGCACCGCTATCCGGCAAATATAGAACAGATTCCTCGTGCAGCCCCCAATGTGCTTGCCCGTGATTTTAC
GGCATCAACGCCTGACCAGAAATGGACGGCAGACATAACGTATCTGTGGACAAATGAAGGCTGGCTGTACCTTGCTGTCG
TCTTGGATCTGTTCTCAAGACGTGTGGTGGGTTGGGCCATGTCTGAATGA

Upstream 100 bases:

>100_bases
TTGAGAACTAAATCCTAAAAAAGGCAGCGGCGTACTTTGCCAAGGAGTCCCTGTAAAGTACGCATGGATCAGGAGCCAAA
GGGACAAGTATCCCATACGT

Downstream 100 bases:

>100_bases
GCAGATGCCCACCTGGCTTGCCAAGCGTTGGAGGCCGCTATCCAACTGAGAAGACCTGGGCTCGGACTGCTGCATCATAG
CGACCAGGGGTGCCAATACA

Product: ISxac3 transposase

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MLCRVVMVSPSGFYSWLKAPEDALMSRSESLRKAIRFYHQRSSGVYGYRKIHKDIIEETTLRCCRETVRRAMKSDGLRSK
VTRKHRYPANIEQIPRAAPNVLARDFTASTPDQKWTADITYLWTNEGWLYLAVVLDLFSRRVVGWAMSE

Sequences:

>Translated_149_residues
MLCRVVMVSPSGFYSWLKAPEDALMSRSESLRKAIRFYHQRSSGVYGYRKIHKDIIEETTLRCCRETVRRAMKSDGLRSK
VTRKHRYPANIEQIPRAAPNVLARDFTASTPDQKWTADITYLWTNEGWLYLAVVLDLFSRRVVGWAMSE
>Mature_149_residues
MLCRVVMVSPSGFYSWLKAPEDALMSRSESLRKAIRFYHQRSSGVYGYRKIHKDIIEETTLRCCRETVRRAMKSDGLRSK
VTRKHRYPANIEQIPRAAPNVLARDFTASTPDQKWTADITYLWTNEGWLYLAVVLDLFSRRVVGWAMSE

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=152, Percent_Identity=30.9210526315789, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI1788405, Length=151, Percent_Identity=37.7483443708609, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1787263, Length=151, Percent_Identity=37.7483443708609, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786753, Length=151, Percent_Identity=37.7483443708609, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786570, Length=151, Percent_Identity=37.7483443708609, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786490, Length=151, Percent_Identity=37.7483443708609, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1789981, Length=148, Percent_Identity=32.4324324324324, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 17363; Mature: 17363

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCRVVMVSPSGFYSWLKAPEDALMSRSESLRKAIRFYHQRSSGVYGYRKIHKDIIEETT
CCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LRCCRETVRRAMKSDGLRSKVTRKHRYPANIEQIPRAAPNVLARDFTASTPDQKWTADIT
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCEEEEEE
YLWTNEGWLYLAVVLDLFSRRVVGWAMSE
EEEECCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLCRVVMVSPSGFYSWLKAPEDALMSRSESLRKAIRFYHQRSSGVYGYRKIHKDIIEETT
CCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LRCCRETVRRAMKSDGLRSKVTRKHRYPANIEQIPRAAPNVLARDFTASTPDQKWTADIT
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCEEEEEE
YLWTNEGWLYLAVVLDLFSRRVVGWAMSE
EEEECCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]