| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is phnC [H]
Identifier: 78358765
GI number: 78358765
Start: 3684815
End: 3685321
Strand: Reverse
Name: phnC [H]
Synonym: Dde_3726
Alternate gene names: 78358765
Gene position: 3685321-3684815 (Counterclockwise)
Preceding gene: 78358766
Following gene: 78358764
Centisome position: 98.8
GC content: 57.99
Gene sequence:
>507_bases GTGAAAACCGGAAATATCGACTTTTTCAACGGCCTGCTGAGCGTTATGGAAAACGTGCTCTGCGGCAGACTGGGGTATAT TTCTCCCATGCGCGCATGGCTGCGTAAATTTCCTGCAGAAGACATCAGCCGTGCCTATGACCTGCTGGACCTTGTGGGTC TTTCCGACTTTGCCCAGGCCCGCGCCGACGAACTTTCGGGCGGACAGCGGCAGCGTGTGGGCATTGCCCGCGCCGTTATG CAGCAGCCTGATATTCTGCTGGCAGACGAGCCTACTTCGTCTCTTGACCCCAAGACGTCGGTGGAAATTATGGAGCTGCT GAACGAGGTGGCAAACCGTAACAACATCCCCGTGCTGGTCAACATCCACGACGTGTCGCTGGGCCGCCGCTTTGCCGACC GCGTGGTGGGCATGAGCAAAGGGCTTGTGGTGTTCGACGGCGATCCGGCCGATCTGGCCAATGATCACCTGAAGGAAATC TACGGCGGCGAGGACTGGCTGAAATGA
Upstream 100 bases:
>100_bases GATATCAGACGAAATCAGGCTGGATATTGCTCGTTTTCGCGGTACATGAGGAGCACCCCAACAATCTCATGCCAGTTGCT GCGGTGAGCAAGTCTTTGGT
Downstream 100 bases:
>100_bases GTGATAGCCCCATGAAACGCCCGGCACCGTTCAGACCGAATTACTGGGCGCGCTCCGGGTACCTGCTTGTCGTGCTGTAC TGCATATGGGCGGCGCAGTC
Product: phosphonate ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKTGNIDFFNGLLSVMENVLCGRLGYISPMRAWLRKFPAEDISRAYDLLDLVGLSDFAQARADELSGGQRQRVGIARAVM QQPDILLADEPTSSLDPKTSVEIMELLNEVANRNNIPVLVNIHDVSLGRRFADRVVGMSKGLVVFDGDPADLANDHLKEI YGGEDWLK
Sequences:
>Translated_168_residues MKTGNIDFFNGLLSVMENVLCGRLGYISPMRAWLRKFPAEDISRAYDLLDLVGLSDFAQARADELSGGQRQRVGIARAVM QQPDILLADEPTSSLDPKTSVEIMELLNEVANRNNIPVLVNIHDVSLGRRFADRVVGMSKGLVVFDGDPADLANDHLKEI YGGEDWLK >Mature_168_residues MKTGNIDFFNGLLSVMENVLCGRLGYISPMRAWLRKFPAEDISRAYDLLDLVGLSDFAQARADELSGGQRQRVGIARAVM QQPDILLADEPTSSLDPKTSVEIMELLNEVANRNNIPVLVNIHDVSLGRRFADRVVGMSKGLVVFDGDPADLANDHLKEI YGGEDWLK
Specific function: Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system [H]
COG id: COG3638
COG function: function code P; ABC-type phosphate/phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1790544, Length=149, Percent_Identity=40.9395973154362, Blast_Score=123, Evalue=5e-30, Organism=Escherichia coli, GI1787089, Length=109, Percent_Identity=42.2018348623853, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787029, Length=144, Percent_Identity=36.8055555555556, Blast_Score=89, Evalue=1e-19, Organism=Escherichia coli, GI1786345, Length=151, Percent_Identity=34.4370860927152, Blast_Score=89, Evalue=1e-19, Organism=Escherichia coli, GI1786872, Length=156, Percent_Identity=35.8974358974359, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1789032, Length=126, Percent_Identity=39.6825396825397, Blast_Score=86, Evalue=9e-19, Organism=Escherichia coli, GI87081834, Length=113, Percent_Identity=44.2477876106195, Blast_Score=86, Evalue=1e-18, Organism=Escherichia coli, GI1786398, Length=105, Percent_Identity=41.9047619047619, Blast_Score=84, Evalue=3e-18, Organism=Escherichia coli, GI1789672, Length=143, Percent_Identity=34.2657342657343, Blast_Score=84, Evalue=4e-18, Organism=Escherichia coli, GI1788225, Length=143, Percent_Identity=35.6643356643357, Blast_Score=84, Evalue=5e-18, Organism=Escherichia coli, GI1786803, Length=153, Percent_Identity=32.6797385620915, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1789864, Length=150, Percent_Identity=31.3333333333333, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1787370, Length=144, Percent_Identity=34.7222222222222, Blast_Score=79, Evalue=1e-16, Organism=Escherichia coli, GI1788644, Length=141, Percent_Identity=32.6241134751773, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789963, Length=109, Percent_Identity=42.2018348623853, Blast_Score=77, Evalue=4e-16, Organism=Escherichia coli, GI1789873, Length=98, Percent_Identity=46.9387755102041, Blast_Score=77, Evalue=5e-16, Organism=Escherichia coli, GI1788506, Length=99, Percent_Identity=41.4141414141414, Blast_Score=77, Evalue=5e-16, Organism=Escherichia coli, GI87081791, Length=130, Percent_Identity=33.8461538461538, Blast_Score=75, Evalue=2e-15, Organism=Escherichia coli, GI1788450, Length=154, Percent_Identity=31.8181818181818, Blast_Score=74, Evalue=5e-15, Organism=Escherichia coli, GI1790739, Length=140, Percent_Identity=34.2857142857143, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1787758, Length=119, Percent_Identity=36.9747899159664, Blast_Score=73, Evalue=8e-15, Organism=Escherichia coli, GI1787105, Length=101, Percent_Identity=39.6039603960396, Blast_Score=72, Evalue=1e-14, Organism=Escherichia coli, GI87081709, Length=114, Percent_Identity=36.8421052631579, Blast_Score=71, Evalue=3e-14, Organism=Escherichia coli, GI1789891, Length=117, Percent_Identity=36.7521367521368, Blast_Score=70, Evalue=7e-14, Organism=Escherichia coli, GI1789593, Length=124, Percent_Identity=30.6451612903226, Blast_Score=70, Evalue=8e-14, Organism=Escherichia coli, GI1787548, Length=125, Percent_Identity=32.8, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI48994883, Length=118, Percent_Identity=35.5932203389831, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787759, Length=125, Percent_Identity=34.4, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787164, Length=95, Percent_Identity=40, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI87082267, Length=140, Percent_Identity=34.2857142857143, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1788761, Length=99, Percent_Identity=37.3737373737374, Blast_Score=67, Evalue=7e-13, Organism=Escherichia coli, GI1787500, Length=118, Percent_Identity=30.5084745762712, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1786253, Length=112, Percent_Identity=32.1428571428571, Blast_Score=64, Evalue=4e-12, Organism=Escherichia coli, GI48994943, Length=115, Percent_Identity=33.9130434782609, Blast_Score=64, Evalue=4e-12, Organism=Escherichia coli, GI1786563, Length=97, Percent_Identity=39.1752577319588, Blast_Score=63, Evalue=8e-12, Organism=Escherichia coli, GI1789962, Length=113, Percent_Identity=32.7433628318584, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI87081782, Length=120, Percent_Identity=35, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI1786703, Length=111, Percent_Identity=36.9369369369369, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI145693107, Length=84, Percent_Identity=39.2857142857143, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1787547, Length=124, Percent_Identity=28.2258064516129, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1787712, Length=108, Percent_Identity=35.1851851851852, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1789890, Length=120, Percent_Identity=35, Blast_Score=60, Evalue=5e-11, Organism=Escherichia coli, GI48994997, Length=83, Percent_Identity=36.144578313253, Blast_Score=60, Evalue=7e-11, Organism=Caenorhabditis elegans, GI115534520, Length=133, Percent_Identity=30.8270676691729, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI85726357, Length=127, Percent_Identity=40.1574803149606, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641565, Length=141, Percent_Identity=34.0425531914894, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR012693 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.28 [H]
Molecular weight: Translated: 18602; Mature: 18602
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGNIDFFNGLLSVMENVLCGRLGYISPMRAWLRKFPAEDISRAYDLLDLVGLSDFAQA CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHH RADELSGGQRQRVGIARAVMQQPDILLADEPTSSLDPKTSVEIMELLNEVANRNNIPVLV HHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE NIHDVSLGRRFADRVVGMSKGLVVFDGDPADLANDHLKEIYGGEDWLK EECCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MKTGNIDFFNGLLSVMENVLCGRLGYISPMRAWLRKFPAEDISRAYDLLDLVGLSDFAQA CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHH RADELSGGQRQRVGIARAVMQQPDILLADEPTSSLDPKTSVEIMELLNEVANRNNIPVLV HHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE NIHDVSLGRRFADRVVGMSKGLVVFDGDPADLANDHLKEIYGGEDWLK EECCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA