| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is phnE [H]
Identifier: 78358764
GI number: 78358764
Start: 3684030
End: 3684818
Strand: Reverse
Name: phnE [H]
Synonym: Dde_3725
Alternate gene names: 78358764
Gene position: 3684818-3684030 (Counterclockwise)
Preceding gene: 78358765
Following gene: 78358763
Centisome position: 98.78
GC content: 55.51
Gene sequence:
>789_bases ATGAGTGATAGCCCCATGAAACGCCCGGCACCGTTCAGACCGAATTACTGGGCGCGCTCCGGGTACCTGCTTGTCGTGCT GTACTGCATATGGGCGGCGCAGTCGCTGGAAATTTCCTTTGACCGCGTCATCGCCGGTATGGACAACGCCCAGCGCTTTC TGGGGGCCATGGTGCCGCCCAACTTTGCCCGCTGGCAGCTGCTTATAAACAACCTTCTGGAAACACTGCAGATTGCTATC ATCTCTTCTGCTTTCGGTGTGCTTATCTCGCTGCCCATCGGTCTTATGGCCGCGCGCAACCTGATGCCCGACTGGCTCAC ATGGCCCAGCCGCGGTTTTATTGCCATCTGCCGTTCTTTTCACCCCGTGATTTTTGCTATTCTGTTTGTAAAGGCCGTGG GGTTCGGGCCGTTGGCGGGTATTCTGACTCTTATTTTCGCTTCCATAGGATTTATCGGCAAACTTTTTGCCGAAGCCATC GAAGAGATTTCGCTTAAACCTGTCGAAGCCATGCGGGCTGCGGGCGCACCGTTTCCTTCTGTGCTTATTTTTGCCGTGCT GCCTCAGGTGCTGAACCGCTTCATCGGGTTTGCCACCTATCAGACAGACGCCAACCTGCGTAACTCGACCATGATAGGCA TTGTGGGTGCAGGCGGCATAGGCGGTACGCTTGCGGCTGCATTCCAGCGTTACGACTATGACTTCGTGAGTGCCATCCTT ATCTGCATCATCGCTCTGGTTATGGTGAGCGAACTGCTTGCCCAGCGGGTGAAGGGGGTGTTCCGATGA
Upstream 100 bases:
>100_bases TGGTGGGCATGAGCAAAGGGCTTGTGGTGTTCGACGGCGATCCGGCCGATCTGGCCAATGATCACCTGAAGGAAATCTAC GGCGGCGAGGACTGGCTGAA
Downstream 100 bases:
>100_bases ACGTAGCAGACCGTGAGTGGGTGCGGTTTACCCGTGCCGAACGCTATGCGCGATTTACCGTATTTCTGTGCGTGGGCGTG CTGCTGGCATGGTCGTTCCG
Product: phosphonate ABC transporter inner membrane protein
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSDSPMKRPAPFRPNYWARSGYLLVVLYCIWAAQSLEISFDRVIAGMDNAQRFLGAMVPPNFARWQLLINNLLETLQIAI ISSAFGVLISLPIGLMAARNLMPDWLTWPSRGFIAICRSFHPVIFAILFVKAVGFGPLAGILTLIFASIGFIGKLFAEAI EEISLKPVEAMRAAGAPFPSVLIFAVLPQVLNRFIGFATYQTDANLRNSTMIGIVGAGGIGGTLAAAFQRYDYDFVSAIL ICIIALVMVSELLAQRVKGVFR
Sequences:
>Translated_262_residues MSDSPMKRPAPFRPNYWARSGYLLVVLYCIWAAQSLEISFDRVIAGMDNAQRFLGAMVPPNFARWQLLINNLLETLQIAI ISSAFGVLISLPIGLMAARNLMPDWLTWPSRGFIAICRSFHPVIFAILFVKAVGFGPLAGILTLIFASIGFIGKLFAEAI EEISLKPVEAMRAAGAPFPSVLIFAVLPQVLNRFIGFATYQTDANLRNSTMIGIVGAGGIGGTLAAAFQRYDYDFVSAIL ICIIALVMVSELLAQRVKGVFR >Mature_261_residues SDSPMKRPAPFRPNYWARSGYLLVVLYCIWAAQSLEISFDRVIAGMDNAQRFLGAMVPPNFARWQLLINNLLETLQIAII SSAFGVLISLPIGLMAARNLMPDWLTWPSRGFIAICRSFHPVIFAILFVKAVGFGPLAGILTLIFASIGFIGKLFAEAIE EISLKPVEAMRAAGAPFPSVLIFAVLPQVLNRFIGFATYQTDANLRNSTMIGIVGAGGIGGTLAAAFQRYDYDFVSAILI CIIALVMVSELLAQRVKGVFR
Specific function: Part of the binding-protein-dependent transport system for phosphonates; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28636; Mature: 28505
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSPMKRPAPFRPNYWARSGYLLVVLYCIWAAQSLEISFDRVIAGMDNAQRFLGAMVPP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC NFARWQLLINNLLETLQIAIISSAFGVLISLPIGLMAARNLMPDWLTWPSRGFIAICRSF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHH HPVIFAILFVKAVGFGPLAGILTLIFASIGFIGKLFAEAIEEISLKPVEAMRAAGAPFPS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHH VLIFAVLPQVLNRFIGFATYQTDANLRNSTMIGIVGAGGIGGTLAAAFQRYDYDFVSAIL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHH ICIIALVMVSELLAQRVKGVFR HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDSPMKRPAPFRPNYWARSGYLLVVLYCIWAAQSLEISFDRVIAGMDNAQRFLGAMVPP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC NFARWQLLINNLLETLQIAIISSAFGVLISLPIGLMAARNLMPDWLTWPSRGFIAICRSF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHH HPVIFAILFVKAVGFGPLAGILTLIFASIGFIGKLFAEAIEEISLKPVEAMRAAGAPFPS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHH VLIFAVLPQVLNRFIGFATYQTDANLRNSTMIGIVGAGGIGGTLAAAFQRYDYDFVSAIL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHH ICIIALVMVSELLAQRVKGVFR HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]