| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is catB2 [H]
Identifier: 78358731
GI number: 78358731
Start: 3651975
End: 3652727
Strand: Direct
Name: catB2 [H]
Synonym: Dde_3692
Alternate gene names: 78358731
Gene position: 3651975-3652727 (Clockwise)
Preceding gene: 78358730
Following gene: 78358732
Centisome position: 97.9
GC content: 62.15
Gene sequence:
>753_bases ATGACCAGCGCAGAACAGCCTGCCATGCACAGCGGCGGCCAGACCGGCTGCAACCATATTCATCCCGCAGCCACCGTGGC ACAGGGCTGCGAAATTGCGGGCAGCGTCATGCACGAACACGCCCGGCTGAAAAAAAACGCCGAACTGCGCGACTCGGTAC TGGGCGCCTACAGCTATCTTTCTGCCGGTTCCATGGCCGTTGCCGCCGACATCGGCAGGTTCACCTCCGTGGGCCCCGGC GCATATATCGGACTGTGGGAACATGACACCTTCACCACCACCCACACCTTTTACCTGTATGAATCCAGCGGCGGGTTCTG CAAAGGCTGGCGCAACTTCAGCCGCGACAGCATAAGAACGGTCATCGGGTCAGACGTGTGGATAGGAGCCAATGCCGTCA TCCGCAAGGGCGTCACCGTGGGCCACGGGGCCGTCATAGGCGCTTCGGCCGTGGTGACCCGCGATGTACCGCCCTTTGCC GTGGTGACAGGCGTTCCGGCGCATGTACACAGGTACCGCTTTGACGCCGCCACCCGCAGCCTGCTGCTGCGCACGCGCTG GTGGGACCTGCCGCGGGAAACAATACAGGACATGGTGGACAAAGAAGTCTGGTACGATATCAATGACCTTGTGGCATATC TGCGGACTCTGCCCGACATGCAGGCCGGACAGACGGCCGGACAAATGGACGGACAGGCGGAGACCCCGCAAGACCGGCAG GCCCCGCAGCAAAAGCACCGTTCACGGAAATGA
Upstream 100 bases:
>100_bases TTCGCTGCGGCAGGGGCTGGAAGACATGTACCGGCGCACCGCACCTCTGCTGACCCGGCACCACGGGGCAGAAAACGCAT CCTGAACGCAGGGAGACGCC
Downstream 100 bases:
>100_bases GCTATGACATCCCCTACGACCGAAGCAAAAAGAGCCGCGCTGCGCCGGAGACTGAGCGAGCTTTCCACCCGTTTCTGCAA CGACGAGGTATTGCTGGCTA
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTSAEQPAMHSGGQTGCNHIHPAATVAQGCEIAGSVMHEHARLKKNAELRDSVLGAYSYLSAGSMAVAADIGRFTSVGPG AYIGLWEHDTFTTTHTFYLYESSGGFCKGWRNFSRDSIRTVIGSDVWIGANAVIRKGVTVGHGAVIGASAVVTRDVPPFA VVTGVPAHVHRYRFDAATRSLLLRTRWWDLPRETIQDMVDKEVWYDINDLVAYLRTLPDMQAGQTAGQMDGQAETPQDRQ APQQKHRSRK
Sequences:
>Translated_250_residues MTSAEQPAMHSGGQTGCNHIHPAATVAQGCEIAGSVMHEHARLKKNAELRDSVLGAYSYLSAGSMAVAADIGRFTSVGPG AYIGLWEHDTFTTTHTFYLYESSGGFCKGWRNFSRDSIRTVIGSDVWIGANAVIRKGVTVGHGAVIGASAVVTRDVPPFA VVTGVPAHVHRYRFDAATRSLLLRTRWWDLPRETIQDMVDKEVWYDINDLVAYLRTLPDMQAGQTAGQMDGQAETPQDRQ APQQKHRSRK >Mature_249_residues TSAEQPAMHSGGQTGCNHIHPAATVAQGCEIAGSVMHEHARLKKNAELRDSVLGAYSYLSAGSMAVAADIGRFTSVGPGA YIGLWEHDTFTTTHTFYLYESSGGFCKGWRNFSRDSIRTVIGSDVWIGANAVIRKGVTVGHGAVIGASAVVTRDVPPFAV VTGVPAHVHRYRFDAATRSLLLRTRWWDLPRETIQDMVDKEVWYDINDLVAYLRTLPDMQAGQTAGQMDGQAETPQDRQA PQQKHRSRK
Specific function: This enzyme is an effector of chloramphenicol resistance in bacteria [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1786537, Length=61, Percent_Identity=47.5409836065574, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.28 [H]
Molecular weight: Translated: 27355; Mature: 27224
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAEQPAMHSGGQTGCNHIHPAATVAQGCEIAGSVMHEHARLKKNAELRDSVLGAYSYL CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SAGSMAVAADIGRFTSVGPGAYIGLWEHDTFTTTHTFYLYESSGGFCKGWRNFSRDSIRT HCCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEEEECCCCHHHHHHCCCHHHHHH VIGSDVWIGANAVIRKGVTVGHGAVIGASAVVTRDVPPFAVVTGVPAHVHRYRFDAATRS HHCCCEEECCHHHHHCCCEECCCHHHCCHHHEECCCCCEEEEECCHHHHHHHHHHHHHHH LLLRTRWWDLPRETIQDMVDKEVWYDINDLVAYLRTLPDMQAGQTAGQMDGQAETPQDRQ HHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHC APQQKHRSRK CHHHHHCCCC >Mature Secondary Structure TSAEQPAMHSGGQTGCNHIHPAATVAQGCEIAGSVMHEHARLKKNAELRDSVLGAYSYL CCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SAGSMAVAADIGRFTSVGPGAYIGLWEHDTFTTTHTFYLYESSGGFCKGWRNFSRDSIRT HCCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEEEECCCCHHHHHHCCCHHHHHH VIGSDVWIGANAVIRKGVTVGHGAVIGASAVVTRDVPPFAVVTGVPAHVHRYRFDAATRS HHCCCEEECCHHHHHCCCEECCCHHHCCHHHEECCCCCEEEEECCHHHHHHHHHHHHHHH LLLRTRWWDLPRETIQDMVDKEVWYDINDLVAYLRTLPDMQAGQTAGQMDGQAETPQDRQ HHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHC APQQKHRSRK CHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1314803 [H]