| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78358679
Identifier: 78358679
GI number: 78358679
Start: 3603752
End: 3605185
Strand: Reverse
Name: 78358679
Synonym: Dde_3640
Alternate gene names: NA
Gene position: 3605185-3603752 (Counterclockwise)
Preceding gene: 78358680
Following gene: 78358678
Centisome position: 96.65
GC content: 55.51
Gene sequence:
>1434_bases ATGACGCAGCTGGAATTGCTTCTGGAGCGCATCATTGACCGGGTGAACGTCAACCTTCGCCATCAGAAGTTTGACGTGGG CGACTACGTGCGCCGGCAGACGCCGCACCTGCATTACTCGAAGTTCTATGCATTCTACGGCCTTTCGGCCGATGACCCCG TGCATTTCCACTTCAAGAACTCGAGTCTTGCCGGCAGCTACTTACTGGGCCGTGTCAACGTGCTGCATTCTGCGTTGTAC AAGAGCGATATCCGCGGTGACGAACTGAAGCGCAAGGGTCAGCATTTTGTCTGCGACGGCAAGATGATTCCTCTGCATGA CGACGAGGTCATCACCATCAAGGACAGCTTTCTGAACAAGACGCTGGTGCATTCCAACTCGCACGATCCGGAATCGCCGG AAGAGTTCACCATCCGCAACACCGTGGCCATGCCTTATGCAAACATCCACGGTTCGCTTACGGAAGGCAGCTTCATCGGG TCCTTTGCCACGGTGGACCTTTCCACCATCCACAACAGCGTGGTGCGCTACTTCTCGTATGTGCAGACAGGCGAACTGGT GGGCAAATGCGTGGAACCCGGACAGATATGGATAAAGAGCGGTGATGAGCTGGAGTTCCACTACAGCTTTGATAAAGCCA TTCTTGACAAGTACATATCGCAGGAAGCCGGTTCCTGCCCCACAGGCGTCCTCATGGAGTTTGTGGAAGTGCGGCAGGAG GATTTCGAGGAGGTCTTTGCCTCGGGTCATATGGCCAGCGGCGCCGGTTCGGCTTCCGGTGCGTCCGTCAGCGGATATGC CGTCATAAAAGGCGACACCGTCATCGGCGAAAATGTGCTGGTGTCACAGCGCGCCTATCTGGATAACGCATGGATGGGCA AGGGCAGCAACGCGCAGGAAAACTGCTACATCATCAACAGCCGTCTGGAACGCAACTGCGTCACTGCCCACGGCGGAAAG ATCATCAACGCGCATCTGGGCGACATGATCTTCACCGGGTTCAACTCGTTCCTGCAGGGCAGCGAAAGCAGTCCGCTGAA AATCGGTGACGGATGCGTGGTCATGCCGCACACCATCATCGATCTGGAAGAGCCGCTGGAAATTCCGGCCGGTCACCTTG TGTGGGGATATATCCGCAACAAGGCCGATCTGGCTGCCCATTCCATCAGCTTTGAAGAGTTTGCCAAAGTGGACGGTGAA GTGACCATGGGTCGTATGACCTTCCGCGGCAAGGGCGGCCCGTTCCTTGATTCCTTCAAAAAGCGCATCAAACGTATTCT CAGCGAAAACGGTGCATTTTTTGATGGCAGCGAAGGCACAGGACACGCACAGAAGGGTAAGAACTTCACGTTCAACATCA TCCAGCCCTATCAGGACGGTGACCCGCGCGGCATGTATCCGACCATTCTCATTCAGCCCAACAACGGCTCCTAG
Upstream 100 bases:
>100_bases GAGGACAACTGTCCGCTAACAACCTACTGCGCATTGACGTAGGAACAACCGACAACTGCGGTCCCGCGGCAATGGGACCG CGCTGTTACGGAGACAAGCC
Downstream 100 bases:
>100_bases CGGGCTGCGGCCTGTGCGCCGCACCGCCGGAAACCTGAAACATTGACGGCCGCCCCGTAAGGGGCGGCTTTTTTATGTGC GATCTCTCCGGCGGATATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transferase Hexapeptide Repeat Containing Protein
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MTQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKNSSLAGSYLLGRVNVLHSALY KSDIRGDELKRKGQHFVCDGKMIPLHDDEVITIKDSFLNKTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIG SFATVDLSTIHNSVVRYFSYVQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLMEFVEVRQE DFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGK IINAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTIIDLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGE VTMGRMTFRGKGGPFLDSFKKRIKRILSENGAFFDGSEGTGHAQKGKNFTFNIIQPYQDGDPRGMYPTILIQPNNGS
Sequences:
>Translated_477_residues MTQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKNSSLAGSYLLGRVNVLHSALY KSDIRGDELKRKGQHFVCDGKMIPLHDDEVITIKDSFLNKTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIG SFATVDLSTIHNSVVRYFSYVQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLMEFVEVRQE DFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGK IINAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTIIDLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGE VTMGRMTFRGKGGPFLDSFKKRIKRILSENGAFFDGSEGTGHAQKGKNFTFNIIQPYQDGDPRGMYPTILIQPNNGS >Mature_476_residues TQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKNSSLAGSYLLGRVNVLHSALYK SDIRGDELKRKGQHFVCDGKMIPLHDDEVITIKDSFLNKTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGS FATVDLSTIHNSVVRYFSYVQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLMEFVEVRQED FEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKI INAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTIIDLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGEV TMGRMTFRGKGGPFLDSFKKRIKRILSENGAFFDGSEGTGHAQKGKNFTFNIIQPYQDGDPRGMYPTILIQPNNGS
Specific function: Unknown
COG id: COG1207
COG function: function code M; N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52871; Mature: 52740
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKN CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECC SSLAGSYLLGRVNVLHSALYKSDIRGDELKRKGQHFVCDGKMIPLHDDEVITIKDSFLNK CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEECCEEEECCCCCEEEEEHHHHCH TLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVDLSTIHNSVVRYFSY HHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEECCEEEEEHHHHHHHHHHHHHH VQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLMEFVEVRQE HHHHHHHHHHCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH DFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQE HHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCEEECCCEEEEHHHHHCCCCCCCCCCCCC NCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTII CEEEECCCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCEECCCEEE DLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGEVTMGRMTFRGKGGPFLDSFK CCCCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHCCCCEEEEEEEEECCCCCHHHHHH KRIKRILSENGAFFDGSEGTGHAQKGKNFTFNIIQPYQDGDPRGMYPTILIQPNNGS HHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure TQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKN CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECC SSLAGSYLLGRVNVLHSALYKSDIRGDELKRKGQHFVCDGKMIPLHDDEVITIKDSFLNK CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEECCEEEECCCCCEEEEEHHHHCH TLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVDLSTIHNSVVRYFSY HHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEECCEEEEEHHHHHHHHHHHHHH VQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLMEFVEVRQE HHHHHHHHHHCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH DFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQE HHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCEEECCCEEEEHHHHHCCCCCCCCCCCCC NCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTII CEEEECCCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCEECCCEEE DLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGEVTMGRMTFRGKGGPFLDSFK CCCCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHCCCCEEEEEEEEECCCCCHHHHHH KRIKRILSENGAFFDGSEGTGHAQKGKNFTFNIIQPYQDGDPRGMYPTILIQPNNGS HHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA