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The map label for this gene is aprF [H]

Identifier: 78358666

GI number: 78358666

Start: 3590745

End: 3592130

Strand: Reverse

Name: aprF [H]

Synonym: Dde_3627

Alternate gene names: 78358666

Gene position: 3592130-3590745 (Counterclockwise)

Preceding gene: 78358674

Following gene: 78358660

Centisome position: 96.3

GC content: 59.16

Gene sequence:

>1386_bases
ATGCTCAGGATGCCGGGAGGCCGTATGCATGTTGTGAAGCAAAAATTCCTGCTGCCGCTGACGCTGGCCGCAGTGCTGGT
GTGGAGCTCGGCCGCAGCTGCCGCCAACGCCACCATGCCGGATGCCGGCACCGCGGGCGGGTATAATCTGGAGCAGGCGG
TGCTCAAGGCCCTGCAGGATAACCCCAGCATCCGTGCCGCCAAGGCAGGCGACCTTGCTGCCGAAGAGTCGCGCAAGGCT
GCCCGCGGCGGGTTCGGTCCTTCGCTGACCGGCAGCTACGGATATCTGAAAAGCGACCACGACAAACCCCGCCGTGATTT
CGTGCAGTACGAGGACAACCTGTATACGCTCGGGGTCAATCTTACCCAGCCGCTGTTCACGGGATTCAATGTACTGTCCA
CGTACCAGAAGGCGGCTCTTGAAAAAGAGCAGGCTGCCGCACAGGTGGACAACGCGGAACTGCAGCTCATTTTGCTGGTG
CAGGAAAATTTTCTGCAGCTGCTCGCCGCGCGTGAAAACCAGCGCAGCGCCGCAGACCAGCTGGAACGCCTGCAAAGTCA
GCTCAAGGTCACGCAGGCATTTTATGATGTGGGGCTGAACCCCCGCATTGACGTGCTGCAGGCCGAGCGCGATGTTTCCG
ATGCCGAAGACAAGCTGTTGCAGGCGGAAAACAGTGTGCAGACACAGATTGCCCGTCTGAACACGCTGCTCAATCTGCCT
CTGGACGCAAGTGCCTCCTATCTTGGCCGGCTGGATTTTGTGCCGTTTTCGCTGACGCTGGAAGAGTGCCTTGAAAGGGC
ATACCGGCGCCGCCCCGATATTTTCATTGCCCAGAAAGCCATTGAAGTGGCCCGCAAAGACAGAACCATCGCCCAGAGCG
GATTTTATCCGCAGATTGGCGCGGAGGCCGATTATTCGAGAAAGGGTGACAACCCCGTGGTGGACGGCAGCAGCGCCATG
TCCACGGAGTTCAGTGAATGGTCGGTGGGTGTTTCCGCCAAGTGGAATCTGTTCGATTCCGGCAAGGATTATTATGCACA
GAGTGCTGCCGCGCAGGTGGTGAACAGGGTGATGGCGGACGAAGCGAATCTGCGGCAGGAAGTGGCCTTTGAGGTCAAGT
CCCGTCATCTTAAACTGTCCGAAGCCGCCAAACGTATCAAGGTGGCCCAGAAAACCGTTGATCAGGCCGCGGAAGCCTAT
CGCATGGCGGTGGCACGCTATCAGGCTCAGGTGGGTACAAACACCGACGTGCTGGATGCGCAGGCCTCGCTGACCAGTGC
CGAAGCCGCGCTGACCAGCGCGCAGGCCGAATATCTTGTGGCCCTTGCCAGCCTGTATGTGTCCATTGGTGACAAAAATC
CTTCGCTGCATATGACAGCGCCCTAG

Upstream 100 bases:

>100_bases
GCCTAATGCGCTTCGCGAGCCAAGCACACACGGGGCAGAGGACCTACTTTGCCTGTAATTTGTCGGAAAGAACTCCGCGT
GACGGGGTCGGTTTTTTATA

Downstream 100 bases:

>100_bases
GCCGCTGTACTCCGGCAATGCGACAACGCGCGGCGGTTTTTTCCGCCGCGCGTTTTTTTATATGCCGCCGGGGGTGTGCC
GCAGCAGCCGTTGTTGTGCG

Product: outer membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MLRMPGGRMHVVKQKFLLPLTLAAVLVWSSAAAAANATMPDAGTAGGYNLEQAVLKALQDNPSIRAAKAGDLAAEESRKA
ARGGFGPSLTGSYGYLKSDHDKPRRDFVQYEDNLYTLGVNLTQPLFTGFNVLSTYQKAALEKEQAAAQVDNAELQLILLV
QENFLQLLAARENQRSAADQLERLQSQLKVTQAFYDVGLNPRIDVLQAERDVSDAEDKLLQAENSVQTQIARLNTLLNLP
LDASASYLGRLDFVPFSLTLEECLERAYRRRPDIFIAQKAIEVARKDRTIAQSGFYPQIGAEADYSRKGDNPVVDGSSAM
STEFSEWSVGVSAKWNLFDSGKDYYAQSAAAQVVNRVMADEANLRQEVAFEVKSRHLKLSEAAKRIKVAQKTVDQAAEAY
RMAVARYQAQVGTNTDVLDAQASLTSAEAALTSAQAEYLVALASLYVSIGDKNPSLHMTAP

Sequences:

>Translated_461_residues
MLRMPGGRMHVVKQKFLLPLTLAAVLVWSSAAAAANATMPDAGTAGGYNLEQAVLKALQDNPSIRAAKAGDLAAEESRKA
ARGGFGPSLTGSYGYLKSDHDKPRRDFVQYEDNLYTLGVNLTQPLFTGFNVLSTYQKAALEKEQAAAQVDNAELQLILLV
QENFLQLLAARENQRSAADQLERLQSQLKVTQAFYDVGLNPRIDVLQAERDVSDAEDKLLQAENSVQTQIARLNTLLNLP
LDASASYLGRLDFVPFSLTLEECLERAYRRRPDIFIAQKAIEVARKDRTIAQSGFYPQIGAEADYSRKGDNPVVDGSSAM
STEFSEWSVGVSAKWNLFDSGKDYYAQSAAAQVVNRVMADEANLRQEVAFEVKSRHLKLSEAAKRIKVAQKTVDQAAEAY
RMAVARYQAQVGTNTDVLDAQASLTSAEAALTSAQAEYLVALASLYVSIGDKNPSLHMTAP
>Mature_461_residues
MLRMPGGRMHVVKQKFLLPLTLAAVLVWSSAAAAANATMPDAGTAGGYNLEQAVLKALQDNPSIRAAKAGDLAAEESRKA
ARGGFGPSLTGSYGYLKSDHDKPRRDFVQYEDNLYTLGVNLTQPLFTGFNVLSTYQKAALEKEQAAAQVDNAELQLILLV
QENFLQLLAARENQRSAADQLERLQSQLKVTQAFYDVGLNPRIDVLQAERDVSDAEDKLLQAENSVQTQIARLNTLLNLP
LDASASYLGRLDFVPFSLTLEECLERAYRRRPDIFIAQKAIEVARKDRTIAQSGFYPQIGAEADYSRKGDNPVVDGSSAM
STEFSEWSVGVSAKWNLFDSGKDYYAQSAAAQVVNRVMADEANLRQEVAFEVKSRHLKLSEAAKRIKVAQKTVDQAAEAY
RMAVARYQAQVGTNTDVLDAQASLTSAEAALTSAQAEYLVALASLYVSIGDKNPSLHMTAP

Specific function: Involved in the secretion of alkaline protease [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 50351; Mature: 50351

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRMPGGRMHVVKQKFLLPLTLAAVLVWSSAAAAANATMPDAGTAGGYNLEQAVLKALQD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC
NPSIRAAKAGDLAAEESRKAARGGFGPSLTGSYGYLKSDHDKPRRDFVQYEDNLYTLGVN
CCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECC
LTQPLFTGFNVLSTYQKAALEKEQAAAQVDNAELQLILLVQENFLQLLAARENQRSAADQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHCCHHHHHHH
LERLQSQLKVTQAFYDVGLNPRIDVLQAERDVSDAEDKLLQAENSVQTQIARLNTLLNLP
HHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
LDASASYLGRLDFVPFSLTLEECLERAYRRRPDIFIAQKAIEVARKDRTIAQSGFYPQIG
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHHCCCCCCCC
AEADYSRKGDNPVVDGSSAMSTEFSEWSVGVSAKWNLFDSGKDYYAQSAAAQVVNRVMAD
CCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
EANLRQEVAFEVKSRHLKLSEAAKRIKVAQKTVDQAAEAYRMAVARYQAQVGTNTDVLDA
HHHHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QASLTSAEAALTSAQAEYLVALASLYVSIGDKNPSLHMTAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC
>Mature Secondary Structure
MLRMPGGRMHVVKQKFLLPLTLAAVLVWSSAAAAANATMPDAGTAGGYNLEQAVLKALQD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC
NPSIRAAKAGDLAAEESRKAARGGFGPSLTGSYGYLKSDHDKPRRDFVQYEDNLYTLGVN
CCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECC
LTQPLFTGFNVLSTYQKAALEKEQAAAQVDNAELQLILLVQENFLQLLAARENQRSAADQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHCCHHHHHHH
LERLQSQLKVTQAFYDVGLNPRIDVLQAERDVSDAEDKLLQAENSVQTQIARLNTLLNLP
HHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
LDASASYLGRLDFVPFSLTLEECLERAYRRRPDIFIAQKAIEVARKDRTIAQSGFYPQIG
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHHCCCCCCCC
AEADYSRKGDNPVVDGSSAMSTEFSEWSVGVSAKWNLFDSGKDYYAQSAAAQVVNRVMAD
CCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
EANLRQEVAFEVKSRHLKLSEAAKRIKVAQKTVDQAAEAYRMAVARYQAQVGTNTDVLDA
HHHHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QASLTSAEAALTSAQAEYLVALASLYVSIGDKNPSLHMTAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1427098; 10984043 [H]