| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358670
Identifier: 78358670
GI number: 78358670
Start: 3594624
End: 3595622
Strand: Direct
Name: 78358670
Synonym: Dde_3631
Alternate gene names: NA
Gene position: 3594624-3595622 (Clockwise)
Preceding gene: 78358669
Following gene: 78358671
Centisome position: 96.36
GC content: 60.66
Gene sequence:
>999_bases ATGCGCATACTATGCACACTCATTTCGCTGCTGCTGCACTGTGCCGTGGTAGTGGCGGCGCTGTACTGGCCGGCTTCGGC TCTTAAGGTGCGTCTGGATGTTCCCGTGTACAAGGTGAACCTTGTCTCGCTGTCCGCCACGGTAAAACACGGCCAGCCCA AACCCGGCACCCCCAAACCGGCGCCTTCGTCCAGTGTTGCCAAAGCACCTTCCAGCGGTGTGGCGCAGCCGGTTCCTCCG CAGCCCAAAGCCGTACCCAAAACACAAAAGCTGCCGGAACCGGTAAAAAAACCGCAACCCGCGCCCCCCAAACCGGCACC TGCACCGCAGGATGCCGCCGCCCTGCCCAAGGCACCTGAAAAACCCAAAAAGCCTGAAGAAAAGCCGAAGCCGGAGCCGG AAAAGAAACCGGAGAAAAAAACCGCACCCGAACCGGAAAAAAAGCCGGAACCGGAAAAAAAGGTGCAGGAAAAGCCCAAA CCGCAGCCGCCTAAAAAGGCGCCCGCGCAGCCTTCGGCCGACGATATTTTAAAACAGGCGCTGGCAGAAACCAGCGCCAC GGTAAAAAAACAGGATACCCGGCAACGTGATGTCCTGCTTGATGAACTGGCTTCGCTGCGAGCGGAGGTTTCTTCGCGCA GCGACGGACAAGGCACCGGCAACGAGGCCGGCGGCACGGCCGACGACGGACAGGGCGGCCGTCAGGACGGCCAGGGACTG GGACTGGCCGATATCTACAGTGCGCTTGTCAAAGAACGGGTGCAGCAGAACTGGCGTTTTCCGCAGCTTGCCGAACGCGT CAACCTGATAACCGTACTGCGCATCAGGCTGGCACCGGACGGATCGCTGCTTGATGTCTCTGTCGAAACACCTTCGGGCC GCCCCGATTATGACAGTTCCGCCGTGAACGCCGTGCACGCCACCGACGACCTGCCGCCCCCGCCTGTGCCGGAACTGCAG GACCTGCGCATCACATTCAACCTGCAGGACATGATGTAG
Upstream 100 bases:
>100_bases AGGCGCGGGCATTGAAAAGCTGGGTGTGGTGGCAGACCGCATGGAAGAACAGCCCGCCCCCGCCGCCAAAAAAAAGAAAT AGCGGGCGCGTAACCTGACA
Downstream 100 bases:
>100_bases CGCCGCGGGGCGCGGCACCCACGACAACACCGGCCACGAAAACACCAGAATGCTGCCGGATAAAACCGGAAGAGACGCGA ATAATGAAAAAACAGAATGT
Product: TonB-like
Products: NA
Alternate protein names: NB-Like; NB Protein; Colicin Uptake Membrane Protein; NB Family Protein
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MRILCTLISLLLHCAVVVAALYWPASALKVRLDVPVYKVNLVSLSATVKHGQPKPGTPKPAPSSSVAKAPSSGVAQPVPP QPKAVPKTQKLPEPVKKPQPAPPKPAPAPQDAAALPKAPEKPKKPEEKPKPEPEKKPEKKTAPEPEKKPEPEKKVQEKPK PQPPKKAPAQPSADDILKQALAETSATVKKQDTRQRDVLLDELASLRAEVSSRSDGQGTGNEAGGTADDGQGGRQDGQGL GLADIYSALVKERVQQNWRFPQLAERVNLITVLRIRLAPDGSLLDVSVETPSGRPDYDSSAVNAVHATDDLPPPPVPELQ DLRITFNLQDMM
Sequences:
>Translated_332_residues MRILCTLISLLLHCAVVVAALYWPASALKVRLDVPVYKVNLVSLSATVKHGQPKPGTPKPAPSSSVAKAPSSGVAQPVPP QPKAVPKTQKLPEPVKKPQPAPPKPAPAPQDAAALPKAPEKPKKPEEKPKPEPEKKPEKKTAPEPEKKPEPEKKVQEKPK PQPPKKAPAQPSADDILKQALAETSATVKKQDTRQRDVLLDELASLRAEVSSRSDGQGTGNEAGGTADDGQGGRQDGQGL GLADIYSALVKERVQQNWRFPQLAERVNLITVLRIRLAPDGSLLDVSVETPSGRPDYDSSAVNAVHATDDLPPPPVPELQ DLRITFNLQDMM >Mature_332_residues MRILCTLISLLLHCAVVVAALYWPASALKVRLDVPVYKVNLVSLSATVKHGQPKPGTPKPAPSSSVAKAPSSGVAQPVPP QPKAVPKTQKLPEPVKKPQPAPPKPAPAPQDAAALPKAPEKPKKPEEKPKPEPEKKPEKKTAPEPEKKPEPEKKVQEKPK PQPPKKAPAQPSADDILKQALAETSATVKKQDTRQRDVLLDELASLRAEVSSRSDGQGTGNEAGGTADDGQGGRQDGQGL GLADIYSALVKERVQQNWRFPQLAERVNLITVLRIRLAPDGSLLDVSVETPSGRPDYDSSAVNAVHATDDLPPPPVPELQ DLRITFNLQDMM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35604; Mature: 35604
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILCTLISLLLHCAVVVAALYWPASALKVRLDVPVYKVNLVSLSATVKHGQPKPGTPKP CHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCEEEEEEEEEEHHHHCCCCCCCCCCC APSSSVAKAPSSGVAQPVPPQPKAVPKTQKLPEPVKKPQPAPPKPAPAPQDAAALPKAPE CCCCHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCC KPKKPEEKPKPEPEKKPEKKTAPEPEKKPEPEKKVQEKPKPQPPKKAPAQPSADDILKQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LAETSATVKKQDTRQRDVLLDELASLRAEVSSRSDGQGTGNEAGGTADDGQGGRQDGQGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GLADIYSALVKERVQQNWRFPQLAERVNLITVLRIRLAPDGSLLDVSVETPSGRPDYDSS CHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEECCCCCEEEEEEECCCCCCCCCHH AVNAVHATDDLPPPPVPELQDLRITFNLQDMM HHHEEECCCCCCCCCCCCCCCEEEEEEHHHCC >Mature Secondary Structure MRILCTLISLLLHCAVVVAALYWPASALKVRLDVPVYKVNLVSLSATVKHGQPKPGTPKP CHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCEEEEEEEEEEHHHHCCCCCCCCCCC APSSSVAKAPSSGVAQPVPPQPKAVPKTQKLPEPVKKPQPAPPKPAPAPQDAAALPKAPE CCCCHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCC KPKKPEEKPKPEPEKKPEKKTAPEPEKKPEPEKKVQEKPKPQPPKKAPAQPSADDILKQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LAETSATVKKQDTRQRDVLLDELASLRAEVSSRSDGQGTGNEAGGTADDGQGGRQDGQGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GLADIYSALVKERVQQNWRFPQLAERVNLITVLRIRLAPDGSLLDVSVETPSGRPDYDSS CHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEECCCCCEEEEEEECCCCCCCCCHH AVNAVHATDDLPPPPVPELQDLRITFNLQDMM HHHEEECCCCCCCCCCCCCCCEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA