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The map label for this gene is tolR [H]

Identifier: 78358669

GI number: 78358669

Start: 3594165

End: 3594605

Strand: Direct

Name: tolR [H]

Synonym: Dde_3630

Alternate gene names: 78358669

Gene position: 3594165-3594605 (Clockwise)

Preceding gene: 78358668

Following gene: 78358670

Centisome position: 96.35

GC content: 54.88

Gene sequence:

>441_bases
ATGGGCGTATCTTTTTCCAACAACAAGGGCTTTGTCTCTGAAATAAACGTCACGCCTTTTGTGGACGTCATGCTGGTGCT
GCTCATCATTTTCATGGTGACGGCCCCCATGCTTACGCAGGGGCTGGATGTGGACCTGCCCGCCACATCCACCGTGGACG
TGCTGCCCACAGACAGCGAAAACATGGTGCTGACCATCAGAAAAGACGGCAGCATGTTTCTTGACGAATATCAGGTGACG
CAAGACGACCTGCCCGGTCATCTGGACAGGCTGGTCAAAAGCCGCAACAAGCAGCTTTTTCTGCGGGCCGACAAAGACGT
GGCCTATGGCGTGGTGGTTCAGGTGATGGGCATTGTAAAAGGCGCGGGCATTGAAAAGCTGGGTGTGGTGGCAGACCGCA
TGGAAGAACAGCCCGCCCCCGCCGCCAAAAAAAAGAAATAG

Upstream 100 bases:

>100_bases
TGCAGCTGGTCAACTTCGCCGGTGTGTTTCTCAACCGCGTTCAGCGCGAACTGCATGCAGCCGCCCCCTCGCGCGGCGAT
GCCGCCTAGCGGAGACCCTC

Downstream 100 bases:

>100_bases
CGGGCGCGTAACCTGACAATGCGCATACTATGCACACTCATTTCGCTGCTGCTGCACTGTGCCGTGGTAGTGGCGGCGCT
GTACTGGCCGGCTTCGGCTC

Product: biopolymer ExbD/TolR family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MGVSFSNNKGFVSEINVTPFVDVMLVLLIIFMVTAPMLTQGLDVDLPATSTVDVLPTDSENMVLTIRKDGSMFLDEYQVT
QDDLPGHLDRLVKSRNKQLFLRADKDVAYGVVVQVMGIVKGAGIEKLGVVADRMEEQPAPAAKKKK

Sequences:

>Translated_146_residues
MGVSFSNNKGFVSEINVTPFVDVMLVLLIIFMVTAPMLTQGLDVDLPATSTVDVLPTDSENMVLTIRKDGSMFLDEYQVT
QDDLPGHLDRLVKSRNKQLFLRADKDVAYGVVVQVMGIVKGAGIEKLGVVADRMEEQPAPAAKKKK
>Mature_145_residues
GVSFSNNKGFVSEINVTPFVDVMLVLLIIFMVTAPMLTQGLDVDLPATSTVDVLPTDSENMVLTIRKDGSMFLDEYQVTQ
DDLPGHLDRLVKSRNKQLFLRADKDVAYGVVVQVMGIVKGAGIEKLGVVADRMEEQPAPAAKKKK

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=128, Percent_Identity=40.625, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15982; Mature: 15851

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVSFSNNKGFVSEINVTPFVDVMLVLLIIFMVTAPMLTQGLDVDLPATSTVDVLPTDSE
CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
NMVLTIRKDGSMFLDEYQVTQDDLPGHLDRLVKSRNKQLFLRADKDVAYGVVVQVMGIVK
CEEEEEECCCCEEHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH
GAGIEKLGVVADRMEEQPAPAAKKKK
CCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GVSFSNNKGFVSEINVTPFVDVMLVLLIIFMVTAPMLTQGLDVDLPATSTVDVLPTDSE
CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
NMVLTIRKDGSMFLDEYQVTQDDLPGHLDRLVKSRNKQLFLRADKDVAYGVVVQVMGIVK
CEEEEEECCCCEEHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH
GAGIEKLGVVADRMEEQPAPAAKKKK
CCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]