| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358639
Identifier: 78358639
GI number: 78358639
Start: 3557615
End: 3558790
Strand: Direct
Name: 78358639
Synonym: Dde_3600
Alternate gene names: NA
Gene position: 3557615-3558790 (Clockwise)
Preceding gene: 78358638
Following gene: 78358640
Centisome position: 95.37
GC content: 59.61
Gene sequence:
>1176_bases ATGCGCATCACCATAACCAGAGACATCACCCTGCCGGACGCCGTCAAGCTGGAACGGTTCCGCCACAGCCCCCATCTGGG GCCGCGCATTCTTTTTTTCAGCGGCGGCACGGCGCTGCGCGCGCTGTCGGCGGACATAACCCGTTACACGCACAACTCCA TACATCTCATCACGCCCTTTGATTCGGGAGGCAGTTCGGCAACCCTGCGCAAAACATTCAACATTCCCGCCGTGGGCGAT ATCCGCAACCGGCTCATGGCGCTGGCCGACCAGACCATTCAGGGCAATCCGGAAATGTTCGAACTGTTCTCGTACCGGCT GCCCCGCAATGCCGTTCAGGACAGCCTGCTGGACGAACTGGCAACCATTGCCTACGGCGAGCATCCGCTGGTGGTCCATG TGCCGGACCCCCTGCGGGCCATCGTACGCAACCACCTGCACCAGTTCATAAAAATGATGCCCGACGACTTTGACCTGCGC GGCGCCAGCATAGGCAATCTGGTTCTTGCCGCGGGCTACCTTGCCAACAGGCGCCATCTTGATCCGGTCATCTACATTTT TTCCAAAATGGTGCAGGTGCTCGGCACCGTAAGGCCCATCGTCAACAGTAATGCCCATCTGTGCGTCCGGCTGCAGGACG GCCGCATCATATGCGGGCAGCACCGGTTCACAGGCAAAAGCGAAGCTCCTGTCACTGCCCCCATCAGCGATATCTGGCTG GCCGCAAACGAACATGACCCCTCACCCGTATCAGTTTCCATCCGCGAAAAAACCCGCGATCTGATCTGTTCCGCAGAGCT TGTCTGCTACCCCATGGGCAGCTTTTTTTCCAGCGTCATGGCCAACCTGCTGCCCCGCGGTGTGGGCAGGGCCGTGGCCG CCAACCACTGCCCCAAAGTCTTTGTACCCAACACCGGCCACGATCCGGAGCTGGCAGGGCACGACACGGGTTCGCAGGTA CGCATGCTGCTTGACCAGCTGAAGCGTGACGACAGCGCCATAACGGACACAGATGTGCTGAATTTCATACTGCTTGATAC CGCATGCCCCCGCTTTTCCGGAGAAACAGCTCTGGAAGCACGGGGCATCCGGATTCTCCGTGTGCCGCTGACAGCCGCCG CGGACGGCCCCATAGACCCAGAACGTCTTAACCCCATACTGCTTTCATTATGCTGA
Upstream 100 bases:
>100_bases GAAAACATATGGATAAAGCCGGCACTTCATGGGATAGATAGCATGCACGCCGTGCCTGCCCGCGCCACAGCGCACGGAAC CACCATCACCCGGAGACAAT
Downstream 100 bases:
>100_bases AAGCATCACCGGGAGGTACGGCATGAAAAAGACAGACAAAGACCACGCACAGCCGCAGAAGGAAAAAGTCTCCGTGGAAG GAGCTATGACCCGCCGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MRITITRDITLPDAVKLERFRHSPHLGPRILFFSGGTALRALSADITRYTHNSIHLITPFDSGGSSATLRKTFNIPAVGD IRNRLMALADQTIQGNPEMFELFSYRLPRNAVQDSLLDELATIAYGEHPLVVHVPDPLRAIVRNHLHQFIKMMPDDFDLR GASIGNLVLAAGYLANRRHLDPVIYIFSKMVQVLGTVRPIVNSNAHLCVRLQDGRIICGQHRFTGKSEAPVTAPISDIWL AANEHDPSPVSVSIREKTRDLICSAELVCYPMGSFFSSVMANLLPRGVGRAVAANHCPKVFVPNTGHDPELAGHDTGSQV RMLLDQLKRDDSAITDTDVLNFILLDTACPRFSGETALEARGIRILRVPLTAAADGPIDPERLNPILLSLC
Sequences:
>Translated_391_residues MRITITRDITLPDAVKLERFRHSPHLGPRILFFSGGTALRALSADITRYTHNSIHLITPFDSGGSSATLRKTFNIPAVGD IRNRLMALADQTIQGNPEMFELFSYRLPRNAVQDSLLDELATIAYGEHPLVVHVPDPLRAIVRNHLHQFIKMMPDDFDLR GASIGNLVLAAGYLANRRHLDPVIYIFSKMVQVLGTVRPIVNSNAHLCVRLQDGRIICGQHRFTGKSEAPVTAPISDIWL AANEHDPSPVSVSIREKTRDLICSAELVCYPMGSFFSSVMANLLPRGVGRAVAANHCPKVFVPNTGHDPELAGHDTGSQV RMLLDQLKRDDSAITDTDVLNFILLDTACPRFSGETALEARGIRILRVPLTAAADGPIDPERLNPILLSLC >Mature_391_residues MRITITRDITLPDAVKLERFRHSPHLGPRILFFSGGTALRALSADITRYTHNSIHLITPFDSGGSSATLRKTFNIPAVGD IRNRLMALADQTIQGNPEMFELFSYRLPRNAVQDSLLDELATIAYGEHPLVVHVPDPLRAIVRNHLHQFIKMMPDDFDLR GASIGNLVLAAGYLANRRHLDPVIYIFSKMVQVLGTVRPIVNSNAHLCVRLQDGRIICGQHRFTGKSEAPVTAPISDIWL AANEHDPSPVSVSIREKTRDLICSAELVCYPMGSFFSSVMANLLPRGVGRAVAANHCPKVFVPNTGHDPELAGHDTGSQV RMLLDQLKRDDSAITDTDVLNFILLDTACPRFSGETALEARGIRILRVPLTAAADGPIDPERLNPILLSLC
Specific function: Unknown
COG id: COG0391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324317, Length=216, Percent_Identity=28.2407407407407, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43047; Mature: 43047
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITITRDITLPDAVKLERFRHSPHLGPRILFFSGGTALRALSADITRYTHNSIHLITPF CEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHEECCEEEEEECC DSGGSSATLRKTFNIPAVGDIRNRLMALADQTIQGNPEMFELFSYRLPRNAVQDSLLDEL CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHH ATIAYGEHPLVVHVPDPLRAIVRNHLHQFIKMMPDDFDLRGASIGNLVLAAGYLANRRHL HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCC DPVIYIFSKMVQVLGTVRPIVNSNAHLCVRLQDGRIICGQHRFTGKSEAPVTAPISDIWL CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHEEE AANEHDPSPVSVSIREKTRDLICSAELVCYPMGSFFSSVMANLLPRGVGRAVAANHCPKV ECCCCCCCCEEEEEHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHCCHHHHHCCCCEE FVPNTGHDPELAGHDTGSQVRMLLDQLKRDDSAITDTDVLNFILLDTACPRFSGETALEA EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHH RGIRILRVPLTAAADGPIDPERLNPILLSLC CCEEEEEEEEEECCCCCCCHHHCCCEEEEEC >Mature Secondary Structure MRITITRDITLPDAVKLERFRHSPHLGPRILFFSGGTALRALSADITRYTHNSIHLITPF CEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHEECCEEEEEECC DSGGSSATLRKTFNIPAVGDIRNRLMALADQTIQGNPEMFELFSYRLPRNAVQDSLLDEL CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHH ATIAYGEHPLVVHVPDPLRAIVRNHLHQFIKMMPDDFDLRGASIGNLVLAAGYLANRRHL HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCC DPVIYIFSKMVQVLGTVRPIVNSNAHLCVRLQDGRIICGQHRFTGKSEAPVTAPISDIWL CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHEEE AANEHDPSPVSVSIREKTRDLICSAELVCYPMGSFFSSVMANLLPRGVGRAVAANHCPKV ECCCCCCCCEEEEEHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHCCHHHHHCCCCEE FVPNTGHDPELAGHDTGSQVRMLLDQLKRDDSAITDTDVLNFILLDTACPRFSGETALEA EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHH RGIRILRVPLTAAADGPIDPERLNPILLSLC CCEEEEEEEEEECCCCCCCHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA