| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is ansB [H]
Identifier: 78358591
GI number: 78358591
Start: 3512532
End: 3514004
Strand: Direct
Name: ansB [H]
Synonym: Dde_3552
Alternate gene names: 78358591
Gene position: 3512532-3514004 (Clockwise)
Preceding gene: 78358590
Following gene: 78358592
Centisome position: 94.16
GC content: 64.15
Gene sequence:
>1473_bases ATGCGAACTGAACATGACGCGCTGGGCAGCAGGGAACTGCCCGCCGATGCGCTGTACGGCATACACACGCTGCGTGCCGC AGAAAATTTTCCCGTAAGCCCCTACCGCCTTGCCCCCCCGCTCATCCGTGCTCTTGCTCAGGTCAAGCTGGCCTGCGCAC GCACCAACGCCCGTCTGGGGTATCTGGACAACCGGCTGGCAGAAGCCATCGAAACCGCCTGCCTGGAAATCATCGGCGGC AGCCATCAGGACAGCTTCATCACAGACCCGTTTCAGGGCGGGGCCGGCACCTCGGCCAACATGAACATGAACGAGGTGGT GGCCAACCGCGCCTGCCAGCTGCTCGGAGGCGTTCCCGGACAGCATTCCCTGGTCAGCCCCCTGAATCATGTCAACATGC ACCAGTCCACCAATGACGTTTTTCCCACCGCACTGCGCGTGGCCATGCTGCACGAACTGACTGCGCTGGAAAAAGAGACC GCCGCCCTGCAGGCGCAGCTGCAGCAGCTTGAAGCCGCACATCAGGACACGCTGCGTCTGGGCCGGACCCAGCTGCAGGA CGCTGTTCCCATGACGTTCGGCATGACATTCGGGGCATGGGCAGAAGCAGTGGCCCGCGACAGATGGCGGGTTTTCAAAT CCAGAGAACGCATACGGCAGGTCAGTCTGGGCGGCACGGCCATCGGCACCGGTCTGGGAGCCCCCCGCGACTACATACTG AAAGCTGCAGACACCCTGCGCAGCGTTACGGGACTCAAACTTTCCAGAGCGGAAAATCTGGTGGATGCCACCCAGAACAC CGACCAGCTGGTCGAGGTTTCCGCGATTCTCAAGGCGCTGGCAGCCAATCTGCTTAAAATCAGCACGGACCTGCGGCTGC TGGGCAGCGGCCCCTGTGCCGGACTGGGCGAGCTGAAACTGCCCGCCATGCAGGCCGGTTCCACCATCATGCCCGGCAAA GTGAACCCTGTCATCGCCGAAGCCGTTTCACAGGCGGCGCTGCGGGTGCTGGCCAACGACGGTCTTGCCGCGCATGCTTC GGCCATGGGCACGCTGGAACTGAACCAGTTCATGCCGCTGCTGGCGCACACCCTGCTCGAGTCGCTGCACCTGATGCGCA GCAGCGTGACGCTGCTCAACAACCGCTGCATGCAGGGCCTTGAGCCGCAGGCGGAACAGGCACAAAGCCATGTGGGACGT TCCGCCGCACTGGCGGCGGTGCTGGTGCCGCTGGCCGGCCACACTGCCGTGGAGCAGATGCTGCACACGGCCCGGACCAC CGGCACTCCGTTTGCCCGGGTGGCGGCGCAGGCTCTCTGCGTGCCGGAAGACAACATCCGCAGCCTGCTGGCACCGGAGC GTATGCGCAAGCTGGGCTTCACACCGCAGGACCTGCCGCAGCAATGCTCCGGCCGCACAGGACACACGGTACCGGACAAG GCTCTGCCGGACGAATCCAACAACGGAGAATGA
Upstream 100 bases:
>100_bases CCGCCCGTGCCGTTCTGATAACCGCGCCGTTCTGTTGAACCGCATGGCCGCCCGTGTTACGGTACCGACATCCTGAAAAA GTGAACAGGCACGGAGGACT
Downstream 100 bases:
>100_bases TCCATGTATGTAGGCATCCATACGGCAAGCCTGCCGTTTGTCTTTGCAGAAGCCCGCAGGCGCATCATCATGCACGCCGC ACTTTACTCCAACTTCGCCC
Product: aspartate ammonia-lyase
Products: NA
Alternate protein names: Aspartase [H]
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MRTEHDALGSRELPADALYGIHTLRAAENFPVSPYRLAPPLIRALAQVKLACARTNARLGYLDNRLAEAIETACLEIIGG SHQDSFITDPFQGGAGTSANMNMNEVVANRACQLLGGVPGQHSLVSPLNHVNMHQSTNDVFPTALRVAMLHELTALEKET AALQAQLQQLEAAHQDTLRLGRTQLQDAVPMTFGMTFGAWAEAVARDRWRVFKSRERIRQVSLGGTAIGTGLGAPRDYIL KAADTLRSVTGLKLSRAENLVDATQNTDQLVEVSAILKALAANLLKISTDLRLLGSGPCAGLGELKLPAMQAGSTIMPGK VNPVIAEAVSQAALRVLANDGLAAHASAMGTLELNQFMPLLAHTLLESLHLMRSSVTLLNNRCMQGLEPQAEQAQSHVGR SAALAAVLVPLAGHTAVEQMLHTARTTGTPFARVAAQALCVPEDNIRSLLAPERMRKLGFTPQDLPQQCSGRTGHTVPDK ALPDESNNGE
Sequences:
>Translated_490_residues MRTEHDALGSRELPADALYGIHTLRAAENFPVSPYRLAPPLIRALAQVKLACARTNARLGYLDNRLAEAIETACLEIIGG SHQDSFITDPFQGGAGTSANMNMNEVVANRACQLLGGVPGQHSLVSPLNHVNMHQSTNDVFPTALRVAMLHELTALEKET AALQAQLQQLEAAHQDTLRLGRTQLQDAVPMTFGMTFGAWAEAVARDRWRVFKSRERIRQVSLGGTAIGTGLGAPRDYIL KAADTLRSVTGLKLSRAENLVDATQNTDQLVEVSAILKALAANLLKISTDLRLLGSGPCAGLGELKLPAMQAGSTIMPGK VNPVIAEAVSQAALRVLANDGLAAHASAMGTLELNQFMPLLAHTLLESLHLMRSSVTLLNNRCMQGLEPQAEQAQSHVGR SAALAAVLVPLAGHTAVEQMLHTARTTGTPFARVAAQALCVPEDNIRSLLAPERMRKLGFTPQDLPQQCSGRTGHTVPDK ALPDESNNGE >Mature_490_residues MRTEHDALGSRELPADALYGIHTLRAAENFPVSPYRLAPPLIRALAQVKLACARTNARLGYLDNRLAEAIETACLEIIGG SHQDSFITDPFQGGAGTSANMNMNEVVANRACQLLGGVPGQHSLVSPLNHVNMHQSTNDVFPTALRVAMLHELTALEKET AALQAQLQQLEAAHQDTLRLGRTQLQDAVPMTFGMTFGAWAEAVARDRWRVFKSRERIRQVSLGGTAIGTGLGAPRDYIL KAADTLRSVTGLKLSRAENLVDATQNTDQLVEVSAILKALAANLLKISTDLRLLGSGPCAGLGELKLPAMQAGSTIMPGK VNPVIAEAVSQAALRVLANDGLAAHASAMGTLELNQFMPLLAHTLLESLHLMRSSVTLLNNRCMQGLEPQAEQAQSHVGR SAALAAVLVPLAGHTAVEQMLHTARTTGTPFARVAAQALCVPEDNIRSLLAPERMRKLGFTPQDLPQQCSGRTGHTVPDK ALPDESNNGE
Specific function: Unknown
COG id: COG1027
COG function: function code E; Aspartate ammonia-lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II fumarase/aspartase family. Aspartase subfamily [H]
Homologues:
Organism=Homo sapiens, GI19743875, Length=462, Percent_Identity=35.0649350649351, Blast_Score=267, Evalue=1e-71, Organism=Escherichia coli, GI87082375, Length=417, Percent_Identity=41.726618705036, Blast_Score=318, Evalue=5e-88, Organism=Escherichia coli, GI1787896, Length=456, Percent_Identity=37.719298245614, Blast_Score=299, Evalue=3e-82, Organism=Caenorhabditis elegans, GI17553882, Length=462, Percent_Identity=37.012987012987, Blast_Score=296, Evalue=2e-80, Organism=Caenorhabditis elegans, GI32565146, Length=328, Percent_Identity=35.3658536585366, Blast_Score=198, Evalue=6e-51, Organism=Saccharomyces cerevisiae, GI6324993, Length=465, Percent_Identity=35.4838709677419, Blast_Score=281, Evalue=2e-76, Organism=Drosophila melanogaster, GI24662684, Length=459, Percent_Identity=37.6906318082789, Blast_Score=293, Evalue=2e-79, Organism=Drosophila melanogaster, GI24640179, Length=459, Percent_Identity=35.2941176470588, Blast_Score=291, Evalue=1e-78, Organism=Drosophila melanogaster, GI24640177, Length=459, Percent_Identity=35.2941176470588, Blast_Score=290, Evalue=2e-78, Organism=Drosophila melanogaster, GI78710009, Length=460, Percent_Identity=35, Blast_Score=285, Evalue=4e-77, Organism=Drosophila melanogaster, GI24583245, Length=459, Percent_Identity=33.9869281045752, Blast_Score=266, Evalue=3e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004708 - InterPro: IPR003031 - InterPro: IPR005677 - InterPro: IPR018951 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF10415 FumaraseC_C; PF00206 Lyase_1 [H]
EC number: =4.3.1.1 [H]
Molecular weight: Translated: 52339; Mature: 52339
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTEHDALGSRELPADALYGIHTLRAAENFPVSPYRLAPPLIRALAQVKLACARTNARLG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCHH YLDNRLAEAIETACLEIIGGSHQDSFITDPFQGGAGTSANMNMNEVVANRACQLLGGVPG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC QHSLVSPLNHVNMHQSTNDVFPTALRVAMLHELTALEKETAALQAQLQQLEAAHQDTLRL CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRTQLQDAVPMTFGMTFGAWAEAVARDRWRVFKSRERIRQVSLGGTAIGTGLGAPRDYIL HHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHH KAADTLRSVTGLKLSRAENLVDATQNTDQLVEVSAILKALAANLLKISTDLRLLGSGPCA HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCCC GLGELKLPAMQAGSTIMPGKVNPVIAEAVSQAALRVLANDGLAAHASAMGTLELNQFMPL CCCCCCCCHHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LAHTLLESLHLMRSSVTLLNNRCMQGLEPQAEQAQSHVGRSAALAAVLVPLAGHTAVEQM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHH LHTARTTGTPFARVAAQALCVPEDNIRSLLAPERMRKLGFTPQDLPQQCSGRTGHTVPDK HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHCCCCCCHHHHHHCCCCCCCCCCC ALPDESNNGE CCCCCCCCCC >Mature Secondary Structure MRTEHDALGSRELPADALYGIHTLRAAENFPVSPYRLAPPLIRALAQVKLACARTNARLG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCHH YLDNRLAEAIETACLEIIGGSHQDSFITDPFQGGAGTSANMNMNEVVANRACQLLGGVPG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC QHSLVSPLNHVNMHQSTNDVFPTALRVAMLHELTALEKETAALQAQLQQLEAAHQDTLRL CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRTQLQDAVPMTFGMTFGAWAEAVARDRWRVFKSRERIRQVSLGGTAIGTGLGAPRDYIL HHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHH KAADTLRSVTGLKLSRAENLVDATQNTDQLVEVSAILKALAANLLKISTDLRLLGSGPCA HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCCC GLGELKLPAMQAGSTIMPGKVNPVIAEAVSQAALRVLANDGLAAHASAMGTLELNQFMPL CCCCCCCCHHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LAHTLLESLHLMRSSVTLLNNRCMQGLEPQAEQAQSHVGRSAALAAVLVPLAGHTAVEQM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHH LHTARTTGTPFARVAAQALCVPEDNIRSLLAPERMRKLGFTPQDLPQQCSGRTGHTVPDK HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHCCCCCCHHHHHHCCCCCCCCCCC ALPDESNNGE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1711029; 8969508; 9384377 [H]